Translational remodeling by RNA ‐binding proteins and noncoding RNAs

Comparison of broad-spectrum antiviral activities of the synthetic rocaglate CR-31-B (−) and the eIF4A-inhibitor Silvestrol

(2020) Christin Müller et al.   ANTIVIRAL RESEARCH

Organic phase separation opens up new opportunities to interrogate the RNA-binding proteome

(2020) Tom Smith et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

When Long Noncoding Becomes Protein Coding

(2020) Corrine Corrina R. Hartford et al.   MOLECULAR AND CELLULAR BIOLOGY

Translation and functional roles of circular RNAs in human cancer

(2020) Ming Lei et al.   Molecular Cancer

Emerging role of tumor-related functional peptides encoded by lncRNA and circRNA

(2020) Pan Wu et al.   Molecular Cancer

Monitoring protein communities and their responses to therapeutics

(2020) Hanna G. Budayeva et al.   NATURE REVIEWS DRUG DISCOVERY

The m6A reader YTHDF1 promotes ovarian cancer progression via augmenting EIF3C translation

(2020) Tao Liu et al.   NUCLEIC ACIDS RESEARCH

Hypoxia influences polysome distribution of human ribosomal protein S12 and alternative splicing of ribosomal protein mRNAs

(2020) Andrea Brumwell et al.   RNA

Coding functions of “noncoding” RNAs

(2020) Lian-Huan Wei et al.   SCIENCE

Pervasive functional translation of noncanonical human open reading frames

(2020) Jin Chen et al.   SCIENCE

27-Plex Tandem Mass Tag Mass Spectrometry for Profiling Brain Proteome in Alzheimer’s Disease

(2020) Zhen Wang et al.   ANALYTICAL CHEMISTRY

SMaRT lncRNA controls translation of a G‐quadruplex‐containing mRNA antagonizing the DHX36 helicase

(2020) Julie Martone et al.   EMBO REPORTS

The rRNA m6A methyltransferase METTL5 is involved in pluripotency and developmental programs

(2020) Valentina V. Ignatova et al.   GENES & DEVELOPMENT

Ribosome heterogeneity in stem cells and development

(2020) Dan Li et al.   JOURNAL OF CELL BIOLOGY

Design of Development Candidate eFT226, a First in Class Inhibitor of Eukaryotic Initiation Factor 4A RNA Helicase

(2020) Justin T. Ernst et al.   JOURNAL OF MEDICINAL CHEMISTRY

Translational efficiency across healthy and tumor tissues is proliferation‐related

(2020) Xavier Hernandez‐Alias et al.   Molecular Systems Biology

A SARS-CoV-2 protein interaction map reveals targets for drug repurposing

(2020) David E. Gordon et al.   NATURE

Global Approaches in Studying RNA-Binding Protein Interaction Networks

(2020) Erin L. Sternburg et al.   TRENDS IN BIOCHEMICAL SCIENCES

Heterogeneity in mRNA Translation

(2020) Stijn Sonneveld et al.   TRENDS IN CELL BIOLOGY

Translation Inhibition by Rocaglates Activates a Species-Specific Cell Death Program in the Emerging Fungal Pathogen Candida auris

(2020) Kali R. Iyer et al.   mBio

The RNA-binding protein DAZL functions as repressor and activator of mRNA translation during oocyte maturation

(2020) Cai-Rong Yang et al.   Nature Communications

Long noncoding RNA AGPG regulates PFKFB3-mediated tumor glycolytic reprogramming

(2020) Jia Liu et al.   Nature Communications

A network of RNA-binding proteins controls translation efficiency to activate anaerobic metabolism

(2020) J. J. David Ho et al.   Nature Communications

The RNA-Binding Protein Rasputin/G3BP Enhances the Stability and Translation of Its Target mRNAs

(2020) John D. Laver et al.   Cell Reports

Profiling of Small Ribosomal Subunits Reveals Modes and Regulation of Translation Initiation

(2020) Adam Giess et al.   Cell Reports

Modulation of circRNA Metabolism by m6A Modification

(2020) Gaia Di Timoteo et al.   Cell Reports

Recent advances in mass spectrometry based clinical proteomics: applications to cancer research

(2020) Andrew Macklin et al.   Clinical Proteomics

Selective Translation of Cell Fate Regulators Mediates Tolerance to Broad Oncogenic Stress

(2020) Elise Y. Cai et al.   Cell Stem Cell

An interaction network of RNA-binding proteins involved in Drosophila oogenesis

(2020) Prashali Bansal et al.   MOLECULAR & CELLULAR PROTEOMICS

GIGYF2 and 4EHP Inhibit Translation Initiation of Defective Messenger RNAs to Assist Ribosome-Associated Quality Control

(2020) Kelsey L. Hickey et al.   MOLECULAR CELL

A large-scale binding and functional map of human RNA-binding proteins

(2020) Eric L. Van Nostrand et al.   NATURE

Efficient recovery of the RNA-bound proteome and protein-bound transcriptome using phase separation (OOPS)

(2020) Eneko Villanueva et al.   Nature Protocols

mRNAs, proteins and the emerging principles of gene expression control

(2020) Christopher Buccitelli et al.   NATURE REVIEWS GENETICS

RNA-tethering assay and eIF4G:eIF4A obligate dimer design uncovers multiple eIF4F functional complexes

(2020) Francis Robert et al.   NUCLEIC ACIDS RESEARCH

Selective translation by alternative bacterial ribosomes

(2020) Yu-Xiang Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanisms of Long Noncoding RNA Nuclear Retention

(2020) Chun-Jie Guo et al.   TRENDS IN BIOCHEMICAL SCIENCES

Interactome analysis reveals that lncRNA HULC promotes aerobic glycolysis through LDHA and PKM2

(2020) Chunqing Wang et al.   Nature Communications

The RNA fold interactome of evolutionary conserved RNA structures in S. cerevisiae

(2020) Nuria Casas-Vila et al.   Nature Communications

Mechanisms of drug interactions between translation-inhibiting antibiotics

(2020) Bor Kavčič et al.   Nature Communications

An integrative ENCODE resource for cancer genomics

(2020) Jing Zhang et al.   Nature Communications

The E2 Marie Kondo and the CTLH E3 ligase clear deposited RNA binding proteins during the maternal-to-zygotic transition

(2020) Michael Zavortink et al.   eLife

Inhibition of RNA-binding proteins with small molecules

(2020) Peng Wu   Nature Reviews Chemistry

Functional Long Non-coding RNAs Evolve from Junk Transcripts

(2020) Alexander F. Palazzo et al.   CELL

A Quantitative Proteome Map of the Human Body

(2020) Lihua Jiang et al.   CELL

Large-scale tethered function assays identify factors that regulate mRNA stability and translation

(2020) En-Ching Luo et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Emerging Roles of tRNAs in RNA Virus Infections

(2020) Alexandre Nunes et al.   TRENDS IN BIOCHEMICAL SCIENCES

METTL6 is a tRNA m3C methyltransferase that regulates pluripotency and tumor cell growth

(2020) Valentina V. Ignatova et al.   Science Advances

Jekyll and Hyde: Activating the Hypoxic Translational Machinery

(2020) J.J. David Ho et al.   TRENDS IN BIOCHEMICAL SCIENCES

Comprehensive identification of RNA–protein interactions in any organism using orthogonal organic phase separation (OOPS)

(2019) Rayner M. L. Queiroz et al.   NATURE BIOTECHNOLOGY

Eukaryotic initiation factor 5B (eIF5B) provides a critical cell survival switch to glioblastoma cells via regulation of apoptosis

(2019) Joseph A. Ross et al.   Cell Death & Disease

Cell-Type-Specific Profiling of Alternative Translation Identifies Regulated Protein Isoform Variation in the Mouse Brain

(2019) Darshan Sapkota et al.   Cell Reports

Ciphers and Executioners: How 3′-Untranslated Regions Determine the Fate of Messenger RNAs

(2019) Vinay K. Mayya et al.   Frontiers in Genetics

Purification of cross-linked RNA-protein complexes by phenol-toluol extraction

(2019) Erika C. Urdaneta et al.   Nature Communications

A threonyl-tRNA synthetase-mediated translation initiation machinery

(2019) Seung Jae Jeong et al.   Nature Communications

MiR-135 suppresses glycolysis and promotes pancreatic cancer cell adaptation to metabolic stress by targeting phosphofructokinase-1

(2019) Ying Yang et al.   Nature Communications

Methods to study RNA–protein interactions

(2019) Muthukumar Ramanathan et al.   NATURE METHODS

A deep proteome and transcriptome abundance atlas of 29 healthy human tissues

(2019) Dongxue Wang et al.   Molecular Systems Biology

Global Positioning System: Understanding Long Noncoding RNAs through Subcellular Localization

(2019) Joana Carlevaro-Fita et al.   MOLECULAR CELL

Long Noncoding RNA MALAT1 regulates cancer glucose metabolism by enhancing mTOR-mediated translation of TCF7L2

(2019) Pushkar Malakar et al.   CANCER RESEARCH

Targeting an RNA-Binding Protein Network in Acute Myeloid Leukemia

(2019) Eric Wang et al.   CANCER CELL

Translation of upstream open reading frames in a model of neuronal differentiation

(2019) Caitlin M. Rodriguez et al.   BMC GENOMICS

The RNA-binding protein TcUBP1 up-regulates an RNA regulon for a cell surface-associated Trypanosoma cruzi glycoprotein and promotes parasite infectivity

(2019) Karina B. Sabalette et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Exploiting inter-data relationships in next-generation proteomics analysis

(2019) Burcu Vitrinel et al.   MOLECULAR & CELLULAR PROTEOMICS

R-DeeP: Proteome-wide and Quantitative Identification of RNA-Dependent Proteins by Density Gradient Ultracentrifugation

(2019) Maiwen Caudron-Herger et al.   MOLECULAR CELL

Cellular functions of long noncoding RNAs

(2019) Run-Wen Yao et al.   NATURE CELL BIOLOGY

A long noncoding RNA distributed in both nucleus and cytoplasm operates in the PYCARD-regulated apoptosis by coordinating the epigenetic and translational regulation

(2019) Hui Miao et al.   PLoS Genetics

PUMILIO hyperactivity drives premature aging of Norad-deficient mice

(2019) Florian Kopp et al.   eLife

Multi-Color Single-Molecule Imaging Uncovers Extensive Heterogeneity in mRNA Decoding

(2019) Sanne Boersma et al.   CELL

Somatic Niche Cells Regulate the CEP-1/p53-Mediated DNA Damage Response in Primordial Germ Cells

(2019) Hui-Ling Ou et al.   DEVELOPMENTAL CELL

Live-Cell Single RNA Imaging Reveals Bursts of Translational Frameshifting

(2019) Kenneth Lyon et al.   MOLECULAR CELL

One Message, Many Translations: Heterogeneity Revealed with Multicolor Imaging

(2019) Lauren A. Blake et al.   MOLECULAR CELL

Protein synthesis rates and ribosome occupancies reveal determinants of translation elongation rates

(2019) Andrea Riba et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

CAPRI enables comparison of evolutionarily conserved RNA interacting regions

(2019) Amol Panhale et al.   Nature Communications

Translational offsetting as a mode of estrogen receptor α‐dependent regulation of gene expression

(2019) Julie Lorent et al.   EMBO JOURNAL

EV71 3C protease induces apoptosis by cleavage of hnRNP A1 to promote apaf-1 translation

(2019) Mei-Ling Li et al.   PLoS One

Eukaryotic initiation factor 5B (eIF5B) regulates temozolomide-mediated apoptosis in brain tumor stem cells (BTSCs).

(2019) Joseph A. Ross et al.   Biochemistry and Cell Biology

Regulation of gene expression by cis-acting long non-coding RNAs

(2019) Noa Gil et al.   NATURE REVIEWS GENETICS

LncRNA GLCC1 promotes colorectal carcinogenesis and glucose metabolism by stabilizing c-Myc

(2019) Jiayin Tang et al.   Nature Communications

m6A in mRNA coding regions promotes translation via the RNA helicase-containing YTHDC2

(2019) Yuanhui Mao et al.   Nature Communications

In-cell identification and measurement of RNA-protein interactions

(2019) Antoine Graindorge et al.   Nature Communications

eIF4A supports an oncogenic translation program in pancreatic ductal adenocarcinoma

(2019) Karina Chan et al.   Nature Communications

Systematic Discovery of Endogenous Human Ribonucleoprotein Complexes

(2019) Anna L. Mallam et al.   Cell Reports

Human protein-RNA interaction network is highly stable across mammals

(2019) Aarthi Ramakrishnan et al.   BMC GENOMICS

LncRNA LINRIS stabilizes IGF2BP2 and promotes the aerobic glycolysis in colorectal cancer

(2019) Yun Wang et al.   Molecular Cancer

The landscape of eukaryotic mRNPs

(2019) Anthony Khong et al.   RNA

The Zebrafish Xenograft Platform—A Novel Tool for Modeling KSHV-Associated Diseases

(2019) Eric S. Pringle et al.   Viruses-Basel

Orthogonal Protein-Responsive mRNA Switches for Mammalian Synthetic Biology

(2019) Hiroki Ono et al.   ACS Synthetic Biology

A BONCAT-iTRAQ method enables temporally resolved quantitative profiling of newly synthesised proteins in Leishmania mexicana parasites during starvation

(2019) Karunakaran Kalesh et al.   PLoS Neglected Tropical Diseases

Identification and analysis of ribosome-associated lncRNAs using ribosome profiling data

(2018) Chao Zeng et al.   BMC GENOMICS

Multiplexed Proteome Dynamics Profiling Reveals Mechanisms Controlling Protein Homeostasis

(2018) Mikhail M. Savitski et al.   CELL

Functional Classification and Experimental Dissection of Long Noncoding RNAs

(2018) Florian Kopp et al.   CELL

Metazoan MicroRNAs

(2018) David P. Bartel   CELL

RNA regulons in cancer and inflammation

(2018) Laura Simone Bisogno et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

SAM68 is required for regulation of Pumilio by the NORAD long noncoding RNA

(2018) Ailone Tichon et al.   GENES & DEVELOPMENT

Peptide Level Turnover Measurements Enable the Study of Proteoform Dynamics

(2018) Jana Zecha et al.   MOLECULAR & CELLULAR PROTEOMICS

Regulation of Hypoxia-Inducible Factor 1α during Hypoxia by DAP5-Induced Translation of PHD2

(2018) Jeffrey D. Bryant et al.   MOLECULAR AND CELLULAR BIOLOGY

Capturing the interactome of newly transcribed RNA

(2018) Xichen Bao et al.   NATURE METHODS

Heterogeneity and specialized functions of translation machinery: from genes to organisms

(2018) Naomi R. Genuth et al.   NATURE REVIEWS GENETICS

A brave new world of RNA-binding proteins

(2018) Matthias W. Hentze et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Alternative 3′ UTRs Modify the Localization, Regulatory Potential, Stability, and Plasticity of mRNAs in Neuronal Compartments

(2018) Georgi Tushev et al.   NEURON

Translational control plays an important role in the adaptive heat-shock response of Streptomyces coelicolor

(2018) Giselda Bucca et al.   NUCLEIC ACIDS RESEARCH

Localization of RNA and translation in the mammalian oocyte and embryo

(2018) Denisa Jansova et al.   PLoS One

Rocaglates as dual-targeting agents for experimental cerebral malaria

(2018) David Langlais et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transcriptome-wide discovery of coding and noncoding RNA-binding proteins

(2018) Rongbing Huang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Codon usage of highly expressed genes affects proteome-wide translation efficiency

(2018) Idan Frumkin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Angiogenic patterning by STEEL, an endothelial-enriched long noncoding RNA

(2018) H. S. Jeffrey Man et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Potential Golden Age to Come - Current Tools, Recent Use Cases, and Future Avenues for de novo Sequencing in Proteomics

(2018) Thilo Muth et al.   PROTEOMICS

Programming gene and engineered-cell therapies with synthetic biology

(2018) Tasuku Kitada et al.   SCIENCE

Nuclear Long Noncoding RNAs: Key Regulators of Gene Expression

(2018) Qinyu Sun et al.   TRENDS IN GENETICS

Therapeutic Opportunities in Eukaryotic Translation

(2018) Jennifer Chu et al.   Cold Spring Harbor Perspectives in Biology

PTRE-seq reveals mechanism and interactions of RNA binding proteins and miRNAs

(2018) Kyle A. Cottrell et al.   Nature Communications

Enhancer-associated long non-coding RNA LEENE regulates endothelial nitric oxide synthase and endothelial function

(2018) Yifei Miao et al.   Nature Communications

The Long Non-coding RNA lnc-31 Interacts with Rock1 mRNA and Mediates Its YB-1-Dependent Translation

(2018) Dacia Dimartino et al.   Cell Reports

Oxygen-Sensitive Remodeling of Central Carbon Metabolism by Archaic eIF5B

(2018) J.J. David Ho et al.   Cell Reports

Genome-wide maps of ribosomal occupancy provide insights into adaptive evolution and regulatory roles of uORFs during Drosophila development

(2018) Hong Zhang et al.   PLOS BIOLOGY

Trans -acting translational regulatory RNA binding proteins

(2018) Robert F. Harvey et al.   Wiley Interdisciplinary Reviews-RNA

Cytoplasmic functions of long noncoding RNAs

(2018) Ji Heon Noh et al.   Wiley Interdisciplinary Reviews-RNA

The Discovery of Ribosome Heterogeneity and Its Implications for Gene Regulation and Organismal Life

(2018) Naomi R. Genuth et al.   MOLECULAR CELL

Sequences enriched in Alu repeats drive nuclear localization of long RNAs in human cells

(2018) Yoav Lubelsky et al.   NATURE

Regulation of microRNA function in animals

(2018) Luca F. R. Gebert et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

OUP accepted manuscript

(2018)   NUCLEIC ACIDS RESEARCH

Cells alter their tRNA abundance to selectively regulate protein synthesis during stress conditions

(2018) Marc Torrent et al.   Science Signaling

Epitranscriptomic Code and Its Alterations in Human Disease

(2018) Rajashekar Varma Kadumuri et al.   TRENDS IN MOLECULAR MEDICINE

Ribosome Profiling: Global Views of Translation

(2018) Nicholas T. Ingolia et al.   Cold Spring Harbor Perspectives in Biology

A widespread alternate form of cap-dependent mRNA translation initiation

(2018) Columba de la Parra et al.   Nature Communications

Differential Requirement for Translation Initiation Factor Pathways during Ecdysone-Dependent Neuronal Remodeling in Drosophila

(2018) Sandra Rode et al.   Cell Reports

Non-invasive measurement of mRNA decay reveals translation initiation as the major determinant of mRNA stability

(2018) Leon Y Chan et al.   eLife

Ssd1 and Gcn2 suppress global translation efficiency in replicatively aged yeast while their activation extends lifespan

(2018) Zheng Hu et al.   eLife

RNA Binding Proteins and Regulation of mRNA Translation in Erythropoiesis

(2018) Kat S. Moore et al.   Frontiers in Physiology

Protein synthesis and quality control in aging

(2018) Aleksandra S. Anisimova et al.   Aging-US

m6A-mediated translation regulation

(2018) Kate D. Meyer   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest

(2018) Jakob Trendel et al.   CELL

Deep proteomic network analysis of Alzheimer’s disease brain reveals alterations in RNA binding proteins and RNA splicing associated with disease

(2018) Erik C. B. Johnson et al.   Molecular Neurodegeneration

Translational control of tumor immune escape via the eIF4F–STAT1–PD-L1 axis in melanoma

(2018) Michaël Cerezo et al.   NATURE MEDICINE

Deep learning enables de novo peptide sequencing from data-independent-acquisition mass spectrometry

(2018) Ngoc Hieu Tran et al.   NATURE METHODS

Deciphering human ribonucleoprotein regulatory networks

(2018) Neelanjan Mukherjee et al.   NUCLEIC ACIDS RESEARCH

Optimization of carbon and energy utilization through differential translational efficiency

(2018) Mahmoud M. Al-Bassam et al.   Nature Communications

Engineering protein-protein devices for multilayered regulation of mRNA translation using orthogonal proteases in mammalian cells

(2018) Federica Cella et al.   Nature Communications

Synthetic RNA-based logic computation in mammalian cells

(2018) Satoshi Matsuura et al.   Nature Communications

eIF4A inhibition: ready for primetime?

(2018) Tyler A. Cunningham et al.   Oncotarget

DAZL Regulates Germ Cell Survival through a Network of PolyA-Proximal mRNA Interactions

(2018) Leah L. Zagore et al.   Cell Reports

Active Ribosome Profiling with RiboLace

(2018) Massimiliano Clamer et al.   Cell Reports

Sequence Determinants for Nuclear Retention and Cytoplasmic Export of mRNAs and lncRNAs

(2018) Alexander F. Palazzo et al.   Frontiers in Genetics

The Impact of Post-transcriptional Control: Better Living Through RNA Regulons

(2018) Biljana Culjkovic-Kraljacic et al.   Frontiers in Genetics

Translation efficiency is maintained at elevated temperature inEscherichia coli

(2017) Gareth J. Morgan et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Translation of CircRNAs

(2017) Nagarjuna Reddy Pamudurti et al.   MOLECULAR CELL

Circ-ZNF609 Is a Circular RNA that Can Be Translated and Functions in Myogenesis

(2017) Ivano Legnini et al.   MOLECULAR CELL

Heterogeneous Ribosomes Preferentially Translate Distinct Subpools of mRNAs Genome-wide

(2017) Zhen Shi et al.   MOLECULAR CELL

Coordinated circRNA Biogenesis and Function with NF90/NF110 in Viral Infection

(2017) Xiang Li et al.   MOLECULAR CELL

DHX9 suppresses RNA processing defects originating from the Alu invasion of the human genome

(2017) Tuğçe Aktaş et al.   NATURE

An atlas of human long non-coding RNAs with accurate 5′ ends

(2017) Chung-Chau Hon et al.   NATURE

Translation from unconventional 5′ start sites drives tumour initiation

(2017) Ataman Sendoel et al.   NATURE

Global translational reprogramming is a fundamental layer of immune regulation in plants

(2017) Guoyong Xu et al.   NATURE

Functional screen of MSI2 interactors identifies an essential role for SYNCRIP in myeloid leukemia stem cells

(2017) Ly P Vu et al.   NATURE GENETICS

Translation complex profile sequencing to study the in vivo dynamics of mRNA–ribosome interactions during translation initiation, elongation and termination

(2017) Nikolay E Shirokikh et al.   Nature Protocols

Genome-wide mapping of infection-induced SINE RNAs reveals a role in selective mRNA export

(2017) John Karijolich et al.   NUCLEIC ACIDS RESEARCH

Dynamic m6A modification regulates local translation of mRNA in axons

(2017) Jun Yu et al.   NUCLEIC ACIDS RESEARCH

Recurrent rewiring and emergence of RNA regulatory networks

(2017) Daniel Wilinski et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification of HuR target circular RNAs uncovers suppression of PABPN1 translation by CircPABPN1

(2017) Kotb Abdelmohsen et al.   RNA Biology

Fructose-driven glycolysis supports anoxia resistance in the naked mole-rat

(2017) Thomas J. Park et al.   SCIENCE

The Growing Toolbox for Protein Synthesis Studies

(2017) Shintaro Iwasaki et al.   TRENDS IN BIOCHEMICAL SCIENCES

Pervasive translational regulation of the cell signalling circuitry underlies mammalian development

(2017) Kotaro Fujii et al.   Nature Communications

The Gcn4 transcription factor reduces protein synthesis capacity and extends yeast lifespan

(2017) Nitish Mittal et al.   Nature Communications

pSILAC mass spectrometry reveals ZFP91 as IMiD-dependent substrate of the CRL4CRBN ubiquitin ligase

(2017) Jian An et al.   Nature Communications

Highly accessible AU-rich regions in 3’ untranslated regions are hotspots for binding of regulatory factors

(2017) Mireya Plass et al.   PLoS Computational Biology

Post-transcriptional regulation across human tissues

(2017) Alexander Franks et al.   PLoS Computational Biology

Time-Resolved Proteomics Extends Ribosome Profiling-Based Measurements of Protein Synthesis Dynamics

(2017) Tzu-Yu Liu et al.   Cell Systems

Widespread and dynamic translational control of red blood cell development

(2016) Juan R. Alvarez-Dominguez et al.   BLOOD

UNR/CSDE1 Drives a Post-transcriptional Program to Promote Melanoma Invasion and Metastasis

(2016) Laurence Wurth et al.   CANCER CELL

On the Dependency of Cellular Protein Levels on mRNA Abundance

(2016) Yansheng Liu et al.   CELL

Noncoding RNA NORAD Regulates Genomic Stability by Sequestering PUMILIO Proteins

(2016) Sungyul Lee et al.   CELL

A Ribosomal Perspective on Proteostasis and Aging

(2016) Kristan K. Steffen et al.   Cell Metabolism

Cooperativity in RNA–protein interactions: the complex is more than the sum of its partners

(2016) Tilmann Achsel et al.   CURRENT OPINION IN NEUROBIOLOGY

Time-resolved Analysis of Proteome Dynamics by Tandem Mass Tags and Stable Isotope Labeling in Cell Culture (TMT-SILAC) Hyperplexing

(2016) Kevin A. Welle et al.   MOLECULAR & CELLULAR PROTEOMICS

Impact of MicroRNA Levels, Target-Site Complementarity, and Cooperativity on Competing Endogenous RNA-Regulated Gene Expression

(2016) Rémy Denzler et al.   MOLECULAR CELL

Blast from the Past: Reassessing Forgotten Translation Inhibitors, Antibiotic Selectivity, and Resistance Mechanisms to Aid Drug Development

(2016) Stefan Arenz et al.   MOLECULAR CELL

eIF3d is an mRNA cap-binding protein that is required for specialized translation initiation

(2016) Amy S. Y. Lee et al.   NATURE

Dynamics of ribosome scanning and recycling revealed by translation complex profiling

(2016) Stuart K. Archer et al.   NATURE

Local regulation of gene expression by lncRNA promoters, transcription and splicing

(2016) Jesse M. Engreitz et al.   NATURE

The RNA-binding protein SFPQ orchestrates an RNA regulon to promote axon viability

(2016) Katharina E Cosker et al.   NATURE NEUROSCIENCE

Non-coding RNAs as drug targets

(2016) Masayuki Matsui et al.   NATURE REVIEWS DRUG DISCOVERY

Unique features of long non-coding RNA biogenesis and function

(2016) Jeffrey J. Quinn et al.   NATURE REVIEWS GENETICS

N6-methyladenosine in mRNA disrupts tRNA selection and translation-elongation dynamics

(2016) Junhong Choi et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Extensive translational regulation during seed germination revealed by polysomal profiling

(2016) Bing Bai et al.   NEW PHYTOLOGIST

Modeling the combined effect of RNA-binding proteins and microRNAs in post-transcriptional regulation

(2016) Saber HafezQorani et al.   NUCLEIC ACIDS RESEARCH

Grad-seq guides the discovery of ProQ as a major small RNA-binding protein

(2016) Alexandre Smirnov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Circular RNAs: Unexpected outputs of many protein-coding genes

(2016) Jeremy E. Wilusz   RNA Biology

Cytoplasmic long noncoding RNAs are frequently bound to and degraded at ribosomes in human cells

(2016) Joana Carlevaro-Fita et al.   RNA

A Cap for Every Occasion: Alternative eIF4F Complexes

(2016) J.J. David Ho et al.   TRENDS IN BIOCHEMICAL SCIENCES

Global changes of the RNA-bound proteome during the maternal-to-zygotic transition in Drosophila

(2016) Vasiliy O. Sysoev et al.   Nature Communications

N6-methyladenosine in mRNA disrupts tRNA selection and translation-elongation dynamics

(2016) Junhong Choi et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Systemic Reprogramming of Translation Efficiencies on Oxygen Stimulus

(2016) J.J. David Ho et al.   Cell Reports

Comprehensive Proteomic Analysis of Human Erythropoiesis

(2016) Emilie-Fleur Gautier et al.   Cell Reports

Bacterial Protein Synthesis as a Target for Antibiotic Inhibition

(2016) Stefan Arenz et al.   Cold Spring Harbor Perspectives in Medicine

Cotranslational microRNA mediated messenger RNA destabilization

(2016) Trinh To Tat et al.   eLife

Tunable protein synthesis by transcript isoforms in human cells

(2016) Stephen N Floor et al.   eLife

The physiology and habitat of the last universal common ancestor

(2016) Madeline C. Weiss et al.   Nature Microbiology

Long Non-coding RNAs in the Cytoplasm

(2016) Farooq Rashid et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Identification of antisense long noncoding RNAs that function as SINEUPs in human cells

(2016) Aleks Schein et al.   Scientific Reports

The Clothes Make the mRNA: Past and Present Trends in mRNP Fashion

(2015) Guramrit Singh et al.   Annual Review of Biochemistry

Translating the Genome in Time and Space: Specialized Ribosomes, RNA Regulons, and RNA-Binding Proteins

(2015) Zhen Shi et al.   Annual Review of Cell and Developmental Biology

Modifications on Translation Initiation

(2015) Sarah F. Mitchell et al.   CELL

Widespread Co-translational RNA Decay Reveals Ribosome Dynamics

(2015) Vicent Pelechano et al.   CELL

Codon Optimality Is a Major Determinant of mRNA Stability

(2015) Vladimir Presnyak et al.   CELL

5′ UTR m6A Promotes Cap-Independent Translation

(2015) Kate D. Meyer et al.   CELL

N6-methyladenosine Modulates Messenger RNA Translation Efficiency

(2015) Xiao Wang et al.   CELL

A Comprehensive Analysis of Replicative Lifespan in 4,698 Single-Gene Deletion Strains Uncovers Conserved Mechanisms of Aging

(2015) Mark A. McCormick et al.   Cell Metabolism

A Long Non-coding RNA, LncMyoD, Regulates Skeletal Muscle Differentiation by Blocking IMP2-Mediated mRNA Translation

(2015) Chenguang Gong et al.   DEVELOPMENTAL CELL

Codon Bias as a Means to Fine-Tune Gene Expression

(2015) Tessa E.F. Quax et al.   MOLECULAR CELL

eIF3 targets cell-proliferation messenger RNAs for translational activation or repression

(2015) Amy S. Y. Lee et al.   NATURE

Dynamic m6A mRNA methylation directs translational control of heat shock response

(2015) Jun Zhou et al.   NATURE

N6-methyladenosine-dependent RNA structural switches regulate RNA–protein interactions

(2015) Nian Liu et al.   NATURE

Mammalian synthetic circuits with RNA binding proteins for RNA-only delivery

(2015) Liliana Wroblewska et al.   NATURE BIOTECHNOLOGY

Targeting the translation machinery in cancer

(2015) Mamatha Bhat et al.   NATURE REVIEWS DRUG DISCOVERY

Discovery and annotation of long noncoding RNAs

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PhyloGene server for identification and visualization of co-evolving proteins using normalized phylogenetic profiles

(2015) Ilyas R. Sadreyev et al.   NUCLEIC ACIDS RESEARCH

RNAe: an effective method for targeted protein translation enhancement by artificial non-coding RNA with SINEB2 repeat

(2015) Yi Yao et al.   NUCLEIC ACIDS RESEARCH

DAP5 associates with eIF2β and eIF4AI to promote Internal Ribosome Entry Site driven translation

(2015) Noa Liberman et al.   NUCLEIC ACIDS RESEARCH

SINEUPs: A new class of natural and synthetic antisense long non-coding RNAs that activate translation

(2015) S Zucchelli et al.   RNA Biology

The utility of protein and mRNA correlation

(2015) Samuel H. Payne   TRENDS IN BIOCHEMICAL SCIENCES

SINEUPs are modular antisense long non-coding RNAs that increase synthesis of target proteins in cells

(2015) Silvia Zucchelli et al.   Frontiers in Cellular Neuroscience

The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs

(2015) Benedikt M. Beckmann et al.   Nature Communications

RNA regulatory networks diversified through curvature of the PUF protein scaffold

(2015) Daniel Wilinski et al.   Nature Communications

Targeting Translation Initiation Bypasses Signaling Crosstalk Mechanisms That Maintain High MYC Levels in Colorectal Cancer

(2015) A. Wiegering et al.   Cancer Discovery

Discovery and annotation of long noncoding RNAs

(2015) John S Mattick et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Differential Stoichiometry among Core Ribosomal Proteins

(2015) Nikolai Slavov et al.   Cell Reports

Evolutionary Conservation and Diversification of Puf RNA Binding Proteins and Their mRNA Targets

(2015) Gregory J. Hogan et al.   PLOS BIOLOGY

Many lncRNAs, 5’UTRs, and pseudogenes are translated and some are likely to express functional proteins

(2015) Zhe Ji et al.   eLife

Localization and abundance analysis of human lncRNAs at single-cell and single-molecule resolution

(2015) Moran N Cabili et al.   GENOME BIOLOGY

N6-Adenosine Methylation in MiRNAs

(2015) Tea Berulava et al.   PLoS One

The Pivotal Regulatory Landscape of RNA Modifications

(2014) Sheng Li et al.   Annual Review of Genomics and Human Genetics

A Dual Program for Translation Regulation in Cellular Proliferation and Differentiation

(2014) Hila Gingold et al.   CELL

Quantifying Absolute Protein Synthesis Rates Reveals Principles Underlying Allocation of Cellular Resources

(2014) Gene-Wei Li et al.   CELL

Rbfox2 controls autoregulation in RNA-binding protein networks

(2014) M. Jangi et al.   GENES & DEVELOPMENT

Ribosome Profiling Reveals a Cell-Type-Specific Translational Landscape in Brain Tumors

(2014) C. Gonzalez et al.   JOURNAL OF NEUROSCIENCE

A Feedforward Regulatory Loop between HuR and the Long Noncoding RNA linc-MD1 Controls Early Phases of Myogenesis

(2014) Ivano Legnini et al.   MOLECULAR CELL

Principles and Properties of Eukaryotic mRNPs

(2014) Sarah F. Mitchell et al.   MOLECULAR CELL

Assessing the ceRNA Hypothesis with Quantitative Measurements of miRNA and Target Abundance

(2014) Rémy Denzler et al.   MOLECULAR CELL

Promoter sequences direct cytoplasmic localization and translation of mRNAs during starvation in yeast

(2014) Brian M. Zid et al.   NATURE

RNA regulons in Hox 5′ UTRs confer ribosome specificity to gene regulation

(2014) Shifeng Xue et al.   NATURE

eIF4F is a nexus of resistance to anti-BRAF and anti-MEK cancer therapies

(2014) Lise Boussemart et al.   NATURE

Quantitative profiling of initiating ribosomes in vivo

(2014) Xiangwei Gao et al.   NATURE METHODS

Genome-wide identification and quantification of protein synthesis in cultured cells and whole tissues by puromycin-associated nascent chain proteomics (PUNCH-P)

(2014) Ranen Aviner et al.   Nature Protocols

Competition between target sites of regulators shapes post-transcriptional gene regulation

(2014) Marvin Jens et al.   NATURE REVIEWS GENETICS

hnRNPA1 couples nuclear export and translation of specific mRNAs downstream of FGF-2/S6K2 signalling

(2014) Rajat Roy et al.   NUCLEIC ACIDS RESEARCH

The Long Non-Coding RNA GAS5 Cooperates with the Eukaryotic Translation Initiation Factor 4E to Regulate c-Myc Translation

(2014) Guangzhen Hu et al.   PLoS One

Upregulation of eIF5B controls cell-cycle arrest and specific developmental stages

(2014) S. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The proteome under translational control

(2014) Daria Gawron et al.   PROTEOMICS

MNKs act as a regulatory switch for eIF4E1 and eIF4E3 driven mRNA translation in DLBCL

(2014) Ari L. Landon et al.   Nature Communications

Widespread Changes in the Posttranscriptional Landscape at the Drosophila Oocyte-to-Embryo Transition

(2014) Iva Kronja et al.   Cell Reports

Long non-coding RNAs as a source of new peptides

(2014) Jorge Ruiz-Orera et al.   eLife

Inferring gene function from evolutionary change in signatures of translation efficiency

(2014) Anita Krisko et al.   GENOME BIOLOGY

Extensive localization of long noncoding RNAs to the cytosol and mono- and polyribosomal complexes

(2014) Sebastiaan van Heesch et al.   GENOME BIOLOGY

Mechanisms coordinating ELAV/Hu mRNA regulons

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Control of Hematopoietic Stem Cell Emergence by Antagonistic Functions of Ribosomal Protein Paralogs

(2013) Yong Zhang et al.   DEVELOPMENTAL CELL

Endogenous miRNA Sponge lincRNA-RoR Regulates Oct4, Nanog, and Sox2 in Human Embryonic Stem Cell Self-Renewal

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Novel proteomic approach (PUNCH-P) reveals cell cycle-specific fluctuations in mRNA translation

(2013) R. Aviner et al.   GENES & DEVELOPMENT

Active Stabilization of Human Endothelial Nitric Oxide Synthase mRNA by hnRNP E1 Protects against Antisense RNA and MicroRNAs

(2013) J. J. D. Ho et al.   MOLECULAR AND CELLULAR BIOLOGY

Protein synthesis rate is the predominant regulator of protein expression during differentiation

(2013) A. R. Kristensen et al.   Molecular Systems Biology

Natural RNA circles function as efficient microRNA sponges

(2013) Thomas B. Hansen et al.   NATURE

Circular RNAs are a large class of animal RNAs with regulatory potency

(2013) Sebastian Memczak et al.   NATURE

Deciphering the rules of ceRNA networks

(2013) M. Cesana et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

eIF4E3 acts as a tumor suppressor by utilizing an atypical mode of methyl-7-guanosine cap recognition

(2013) M. J. Osborne et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

HuR is a post-transcriptional regulator of core metabolic enzymes in pancreatic cancer

(2013) Richard A Burkhart et al.   RNA Biology

Primate Transcript and Protein Expression Levels Evolve Under Compensatory Selection Pressures

(2013) Z. Khan et al.   SCIENCE

The Current Status of Vertebrate Cellular mRNA IRESs

(2013) R. J. Jackson   Cold Spring Harbor Perspectives in Biology

Cold-induced RNA-binding proteins regulate circadian gene expression by controlling alternative polyadenylation

(2013) Yuting Liu et al.   Scientific Reports

Translational Profiling of Clock Cells Reveals Circadianly Synchronized Protein Synthesis

(2013) Yanmei Huang et al.   PLOS BIOLOGY

Competition and collaboration between RNA-binding proteins and microRNAs

(2013) J. J. David Ho et al.   Wiley Interdisciplinary Reviews-RNA

Translational reprogramming in cellular stress response

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Widespread uncoupling between transcriptome and translatome variations after a stimulus in mammalian cells

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The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression

(2012) T. Derrien et al.   GENOME RESEARCH

Antagonistic Function of the RNA-binding Protein HuR and miR-200b in Post-transcriptional Regulation of Vascular Endothelial Growth Factor-A Expression and Angiogenesis

(2012) Sung-Hee Chang et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Functional Importance of Dicer Protein in the Adaptive Cellular Response to Hypoxia

(2012) J. J. David Ho et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Biochemistry and Evolution of Anaerobic Energy Metabolism in Eukaryotes

(2012) M. Muller et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

LincRNA-p21 Suppresses Target mRNA Translation

(2012) Je-Hyun Yoon et al.   MOLECULAR CELL

Control of somatic tissue differentiation by the long non-coding RNA TINCR

(2012) Markus Kretz et al.   NATURE

Identification of small RNA pathway genes using patterns of phylogenetic conservation and divergence

(2012) Yuval Tabach et al.   NATURE

An oxygen-regulated switch in the protein synthesis machinery

(2012) James Uniacke et al.   NATURE

Long non-coding antisense RNA controls Uchl1 translation through an embedded SINEB2 repeat

(2012) Claudia Carrieri et al.   NATURE

Landscape of transcription in human cells

(2012) Sarah Djebali et al.   NATURE

Peptidomic discovery of short open reading frame–encoded peptides in human cells

(2012) Sarah A Slavoff et al.   Nature Chemical Biology

The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments

(2012) Nicholas T Ingolia et al.   Nature Protocols

Insights into the regulation of protein abundance from proteomic and transcriptomic analyses

(2012) Christine Vogel et al.   NATURE REVIEWS GENETICS

Extensive Translatome Remodeling during ER Stress Response in Mammalian Cells

(2012) Iván Ventoso et al.   PLoS One

A ribosome-specialized translation initiation pathway is required for cap-dependent translation of vesicular stomatitis virus mRNAs

(2012) A. S.-Y. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Global mapping of translation initiation sites in mammalian cells at single-nucleotide resolution

(2012) S. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Distinct perturbation of the translatome by the antidiabetic drug metformin

(2012) O. Larsson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Differential association of microRNAs with polysomes reflects distinct strengths of interactions with their mRNA targets

(2012) N. Molotski et al.   RNA

Transfer RNA modifications: nature's combinatorial chemistry playground

(2012) Jane E. Jackman et al.   Wiley Interdisciplinary Reviews-RNA

Ribosome-Mediated Specificity in Hox mRNA Translation and Vertebrate Tissue Patterning

(2011) Nadya Kondrashov et al.   CELL

A Long Noncoding RNA Controls Muscle Differentiation by Functioning as a Competing Endogenous RNA

(2011) Marcella Cesana et al.   CELL

A ceRNA Hypothesis: The Rosetta Stone of a Hidden RNA Language?

(2011) Leonardo Salmena et al.   CELL

Life Span Extension via eIF4G Inhibition Is Mediated by Posttranscriptional Remodeling of Stress Response Gene Expression in C. elegans

(2011) Aric N. Rogers et al.   Cell Metabolism

Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

(2011) M. N. Cabili et al.   GENES & DEVELOPMENT

Next-generation mTOR inhibitors in clinical oncology: how pathway complexity informs therapeutic strategy

(2011) Seth A. Wander et al.   JOURNAL OF CLINICAL INVESTIGATION

Targeting cap-dependent translation blocks converging survival signals by AKT and PIM kinases in lymphoma

(2011) Jonathan H. Schatz et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Protein Expression Regulation under Oxidative Stress

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lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3′ UTRs via Alu elements

(2011) Chenguang Gong et al.   NATURE

Global quantification of mammalian gene expression control

(2011) Björn Schwanhäusser et al.   NATURE

Evidence that Lin28 stimulates translation by recruiting RNA helicase A to polysomes

(2011) J. Jin et al.   NUCLEIC ACIDS RESEARCH

IRES-mediated translation of cellular messenger RNA operates in eIF2α- independent manner during stress

(2011) Nehal Thakor et al.   NUCLEIC ACIDS RESEARCH

Imaging protein synthesis in cells and tissues with an alkyne analog of puromycin

(2011) J. Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Selective inhibition of microRNA accessibility by RBM38 is required for p53 activity

(2011) Nicolas Léveillé et al.   Nature Communications

Phosphorylation of the NFAR proteins by the dsRNA-dependent protein kinase PKR constitutes a novel mechanism of translational regulation and cellular defense

(2010) A. Harashima et al.   GENES & DEVELOPMENT

Activities of Ligatin and MCT-1/DENR in eukaryotic translation initiation and ribosomal recycling

(2010) M. A. Skabkin et al.   GENES & DEVELOPMENT

GTP-independent tRNA Delivery to the Ribosomal P-site by a Novel Eukaryotic Translation Factor

(2010) Sergey E. Dmitriev et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

TGF-β-mediated phosphorylation of hnRNP E1 induces EMT via transcript-selective translational induction of Dab2 and ILEI

(2010) Arindam Chaudhury et al.   NATURE CELL BIOLOGY

Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells

(2010) Sabine Loewer et al.   NATURE GENETICS

The mechanism of eukaryotic translation initiation and principles of its regulation

(2010) Richard J. Jackson et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

CREB up-regulates long non-coding RNA, HULC expression through interaction with microRNA-372 in liver cancer

(2010) Jiayi Wang et al.   NUCLEIC ACIDS RESEARCH

Noncoding RNA Gas5 Is a Growth Arrest- and Starvation-Associated Repressor of the Glucocorticoid Receptor

(2010) T. Kino et al.   Science Signaling

Hypoxia signaling and resistance in C. elegans

(2010) Jo Anne Powell-Coffman   TRENDS IN ENDOCRINOLOGY AND METABOLISM

The DLK-1 Kinase Promotes mRNA Stability and Local Translation in C. elegans Synapses and Axon Regeneration

(2009) Dong Yan et al.   CELL

Systems-level dynamic analyses of fate change in murine embryonic stem cells

(2009) Rong Lu et al.   NATURE

SUnSET, a nonradioactive method to monitor protein synthesis

(2009) Enrico K Schmidt et al.   NATURE METHODS

Electron transfer in syntrophic communities of anaerobic bacteria and archaea

(2009) Alfons J. M. Stams et al.   NATURE REVIEWS MICROBIOLOGY

Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis

(2009) A. Mustroph et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Systematic analysis of posttranscriptional gene expression

(2009) Adam R. Morris et al.   Wiley Interdisciplinary Reviews-Systems Biology and Medicine

A Hierarchical Network Controls Protein Translation during Murine Embryonic Stem Cell Self-Renewal and Differentiation

(2008) Prabha Sampath et al.   Cell Stem Cell

Reprogramming mRNA translation during stress

(2008) Satoshi Yamasaki et al.   CURRENT OPINION IN CELL BIOLOGY

SMD and NMD are competitive pathways that contribute to myogenesis: effects on PAX3 and myogenin mRNAs

(2008) C. Gong et al.   GENES & DEVELOPMENT

Hypoxia-mediated Selective mRNA Translation by an Internal Ribosome Entry Site-independent Mechanism

(2008) Regina M. Young et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Hypoxic Reactive Oxygen Species Regulate the Integrated Stress Response and Cell Survival

(2008) Liping Liu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Widespread changes in protein synthesis induced by microRNAs

(2008) Matthias Selbach et al.   NATURE

Global analysis of cellular protein translation by pulsed SILAC

(2008) Björn Schwanhäusser et al.   PROTEOMICS

Diverse RNA-Binding Proteins Interact with Functionally Related Sets of RNAs, Suggesting an Extensive Regulatory System

(2008) Daniel J Hogan et al.   PLOS BIOLOGY