The E2 Marie Kondo and the CTLH E3 ligase clear deposited RNA binding proteins during the maternal-to-zygotic transition

The maternal-to-zygotic transition revisited

(2019) Nadine L. Vastenhouw et al.   DEVELOPMENT

The mammalian CTLH complex is an E3 ubiquitin ligase that targets its subunit muskelin for degradation

(2019) Matthew E. R. Maitland et al.   Scientific Reports

Interconversion between Anticipatory and Active GID E3 Ubiquitin Ligase Conformations via Metabolically Driven Substrate Receptor Assembly

(2019) Shuai Qiao et al.   MOLECULAR CELL

Identification of PNG kinase substrates uncovers interactions with the translational repressor TRAL in the oocyte-to-embryo transition

(2018) Masatoshi Hara et al.   eLife

The multi-subunit GID/CTLH E3 ubiquitin ligase promotes cell proliferation and targets the transcription factor Hbp1 for degradation

(2018) Fabienne Lampert et al.   eLife

FlyBase 2.0: the next generation

(2018) Jim Thurmond et al.   NUCLEIC ACIDS RESEARCH

Sequential Regulation of Maternal mRNAs through a Conserved cis-Acting Element in Their 3′ UTRs

(2018) Pooja Flora et al.   Cell Reports

Translational repression of the Drosophila nanos mRNA involves the RNA helicase Belle and RNA coating by Me31B and Trailer hitch

(2017) Michael Götze et al.   RNA

ME31B globally represses maternal mRNAs by two distinct mechanisms during the Drosophila maternal-to-zygotic transition

(2017) Miranda Wang et al.   eLife

Control of PNG kinase, a key regulator of mRNA translation, is coupled to meiosis completion at egg activation

(2017) Masatoshi Hara et al.   eLife

Global changes of the RNA-bound proteome during the maternal-to-zygotic transition in Drosophila

(2016) Vasiliy O. Sysoev et al.   Nature Communications

mRNA poly(A)-tail changes specified by deadenylation broadly reshape translation in Drosophila oocytes and early embryos

(2016) Stephen W Eichhorn et al.   eLife

The Phyre2 web portal for protein modeling, prediction and analysis

(2015) Lawrence A Kelley et al.   Nature Protocols

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Widespread Changes in the Posttranscriptional Landscape at the Drosophila Oocyte-to-Embryo Transition

(2014) Iva Kronja et al.   Cell Reports

Global regulation of mRNA translation and stability in the early Drosophila embryo by the Smaug RNA-binding protein

(2014) Linan Chen et al.   GENOME BIOLOGY

A Meiosis-Specific Form of the APC/C Promotes the Oocyte-to-Embryo Transition by Decreasing Levels of the Polo Kinase Inhibitor Matrimony

(2013) Zachary J. Whitfield et al.   PLOS BIOLOGY

The Ubiquitin Code

(2012) David Komander et al.   Annual Review of Biochemistry

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Crystal structure of a minimal eIF4E-Cup complex reveals a general mechanism of eIF4E regulation in translational repression

(2012) K. Kinkelin et al.   RNA

In Vivo RNAi Screen Reveals Neddylation Genes as Novel Regulators of Hedgehog Signaling

(2011) Juan Du et al.   PLoS One

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

An essential role for the RNA-binding protein Smaug during the Drosophila maternal-to-zygotic transition

(2009) B. Benoit et al.   DEVELOPMENT

Global Transcriptional Repression in C. elegans Germline Precursors by Regulated Sequestration of TAF-4

(2008) Tugba Guven-Ozkan et al.   CELL

Mechanical stimulation by osmotic and hydrostatic pressure activates Drosophila oocytes in vitro in a calcium-dependent manner

(2008) Vanessa L. Horner et al.   DEVELOPMENTAL BIOLOGY

Transitioning from egg to embryo: Triggers and mechanisms of egg activation

(2008) Vanessa L. Horner et al.   DEVELOPMENTAL DYNAMICS

RanBPM regulates cell shape, arrangement, and capacity of the female germline stem cell niche inDrosophila melanogaster

(2008) David A. Dansereau et al.   JOURNAL OF CELL BIOLOGY

Similar Modes of Interaction Enable Trailer Hitch and EDC3 To Associate with DCP1 and Me31B in Distinct Protein Complexes

(2008) F. Tritschler et al.   MOLECULAR AND CELLULAR BIOLOGY

The Yeast GID Complex, a Novel Ubiquitin Ligase (E3) Involved in the Regulation of Carbohydrate Metabolism

(2008) Olivier Santt et al.   MOLECULAR BIOLOGY OF THE CELL

The zinc-finger protein Zelda is a key activator of the early zygotic genome in Drosophila

(2008) Hsiao-Lan Liang et al.   NATURE