Dynamics of ribosome scanning and recycling revealed by translation complex profiling

Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation Complex

(2015) Jose L. Llácer et al.   MOLECULAR CELL

Targeting the translation machinery in cancer

(2015) Mamatha Bhat et al.   NATURE REVIEWS DRUG DISCOVERY

Translation initiation mediated by RNA looping

(2015) Ki Young Paek et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Probing the closed-loop model of mRNA translation in living cells

(2015) Stuart K Archer et al.   RNA Biology

The Scanning Mechanism of Eukaryotic Translation Initiation

(2014) Alan G. Hinnebusch   Annual Review of Biochemistry

Selective and flexible depletion of problematic sequences from RNA-seq libraries at the cDNA stage

(2014) Stuart K Archer et al.   BMC GENOMICS

Accounting for biases in riboprofiling data indicates a major role for proline in stalling translation

(2014) Carlo G. Artieri et al.   GENOME RESEARCH

Causal signals between codon bias, mRNA structure, and the efficiency of translation and elongation

(2014) C. Pop et al.   Molecular Systems Biology

Ribosome profiling: new views of translation, from single codons to genome scale

(2014) Nicholas T. Ingolia   NATURE REVIEWS GENETICS

Structure of the mammalian 80S initiation complex with initiation factor 5B on HCV-IRES RNA

(2014) Hiroshi Yamamoto et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Eukaryotic translation initiation factor eIF5 promotes the accuracy of start codon recognition by regulating Pi release and conformational transitions of the preinitiation complex

(2014) Adesh K. Saini et al.   NUCLEIC ACIDS RESEARCH

Interaction between the poly(A)-binding protein Pab1 and the eukaryotic release factor eRF3 regulates translation termination but not mRNA decay inSaccharomyces cerevisiae

(2014) Sylvain Roque et al.   RNA

Distinct stages of the translation elongation cycle revealed by sequencing ribosome-protected mRNA fragments

(2014) Liana F Lareau et al.   eLife

Ribosome profiling reveals post-transcriptional buffering of divergent gene expression in yeast

(2013) C. J. McManus et al.   GENOME RESEARCH

The initiation of mammalian protein synthesis and mRNA scanning mechanism

(2013) Ivan B. Lomakin et al.   NATURE

Molecular Architecture of a Eukaryotic Translational Initiation Complex

(2013) I. S. Fernandez et al.   SCIENCE

Structural basis of highly conserved ribosome recycling in eukaryotes and archaea

(2012) Thomas Becker et al.   NATURE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Possible steps of complete disassembly of post-termination complex by yeast eEF3 deduced from inhibition by translocation inhibitors

(2012) Shinya Kurata et al.   NUCLEIC ACIDS RESEARCH

Synchronizing Nuclear Import of Ribosomal Proteins with Ribosome Assembly

(2012) D. Kressler et al.   SCIENCE

Principles of Translational Control: An Overview

(2012) J. W. B. Hershey et al.   Cold Spring Harbor Perspectives in Biology

The C-Terminal Domain of Eukaryotic Initiation Factor 5 Promotes Start Codon Recognition by Its Dynamic Interplay with eIF1 and eIF2β

(2012) Rafael E. Luna et al.   Cell Reports

Global quantification of mammalian gene expression control

(2011) Björn Schwanhäusser et al.   NATURE

The iron–sulphur protein RNase L inhibitor functions in translation termination

(2010) Sohail Khoshnevis et al.   EMBO REPORTS

Eukaryotic Protein Synthesis: Still a Mystery

(2010) William C. Merrick   JOURNAL OF BIOLOGICAL CHEMISTRY

Genome-wide measurement of RNA secondary structure in yeast

(2010) Michael Kertesz et al.   NATURE

The mechanism of eukaryotic translation initiation and principles of its regulation

(2010) Richard J. Jackson et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

How Does a Scanning Ribosomal Particle Move along the 5′-Untranslated Region of Eukaryotic mRNA? Brownian Ratchet Model

(2009) Alexander S. Spirin   BIOCHEMISTRY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Rational Extension of the Ribosome Biogenesis Pathway Using Network-Guided Genetics

(2009) Zhihua Li et al.   PLOS BIOLOGY

GtRNAdb: a database of transfer RNA genes detected in genomic sequence

(2008) P. P. Chan et al.   NUCLEIC ACIDS RESEARCH

The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing

(2008) U. Nagalakshmi et al.   SCIENCE