Post-transcriptional regulation across human tissues

Gene‐specific correlation of RNA and protein levels in human cells and tissues

(2016) Fredrik Edfors et al.   Molecular Systems Biology

Differential dynamics of the mammalian mRNA and protein expression response to misfolding stress

(2016) Z. Cheng et al.   Molecular Systems Biology

All Ribosomes Are Created Equal. Really?

(2016) Thomas Preiss   TRENDS IN BIOCHEMICAL SCIENCES

Estimating a Structured Covariance Matrix From Multilab Measurements in High-Throughput Biology

(2015) Alexander M. Franks et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

Translation regulation by ribosomes: Increased complexity and expanded scope

(2015) Vincent P. Mauro et al.   RNA Biology

Dynamic profiling of the protein life cycle in response to pathogens

(2015) M. Jovanovic et al.   SCIENCE

Differential Stoichiometry among Core Ribosomal Proteins

(2015) Nikolai Slavov et al.   Cell Reports

Accounting for Experimental Noise Reveals That mRNA Levels, Amplified by Post-Transcriptional Processes, Largely Determine Steady-State Protein Levels in Yeast

(2015) Gábor Csárdi et al.   PLoS Genetics

A draft map of the human proteome

(2014) Min-Sik Kim et al.   NATURE

Mass-spectrometry-based draft of the human proteome

(2014) Mathias Wilhelm et al.   NATURE

A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium

(2014)   NATURE BIOTECHNOLOGY

Global absolute quantification reveals tight regulation of protein expression in single Xenopus eggs

(2014) Arne H. Smits et al.   NUCLEIC ACIDS RESEARCH

Constant Growth Rate Can Be Supported by Decreasing Energy Flux and Increasing Aerobic Glycolysis

(2014) Nikolai Slavov et al.   Cell Reports

Musashi proteins are post-transcriptional regulators of the epithelial-luminal cell state

(2014) Yarden Katz et al.   eLife

System wide analyses have underestimated protein abundances and the importance of transcription in mammals

(2014) Jingyi Jessica Li et al.   PeerJ

Roles for transcript leaders in translation and mRNA decay revealed by transcript leader sequencing

(2013) J. A. Arribere et al.   GENOME RESEARCH

Analysis of the Human Tissue-specific Expression by Genome-wide Integration of Transcriptomics and Antibody-based Proteomics

(2013) Linn Fagerberg et al.   MOLECULAR & CELLULAR PROTEOMICS

Insights into RNA Biology from an Atlas of Mammalian mRNA-Binding Proteins

(2012) Alfredo Castello et al.   CELL

A conserved cell growth cycle can account for the environmental stress responses of divergent eukaryotes

(2012) Nikolai Slavov et al.   MOLECULAR BIOLOGY OF THE CELL

Landscape of transcription in human cells

(2012) Sarah Djebali et al.   NATURE

Protease bias in absolute protein quantitation

(2012) Mao Peng et al.   NATURE METHODS

Alternative transcription start site selection leads to large differences in translation activity in yeast

(2012) M. F. Rojas-Duran et al.   RNA

Coupling among growth rate response, metabolic cycle, and cell division cycle in yeast

(2011) Nikolai Slavov et al.   MOLECULAR BIOLOGY OF THE CELL

Fast-acting and nearly gratuitous induction of gene expression and protein depletion in Saccharomyces cerevisiae

(2011) R. Scott McIsaac et al.   MOLECULAR BIOLOGY OF THE CELL

Global quantification of mammalian gene expression control

(2011) Björn Schwanhäusser et al.   NATURE

Metabolic cycling without cell division cycling in respiring yeast

(2011) N. Slavov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Correlation signature of the macroscopic states of the gene regulatory network in cancer

(2009) N. Slavov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays

(2008) J. C. Marioni et al.   GENOME RESEARCH

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY