Non-coding RNAs in human health and disease: potential function as biomarkers and therapeutic targets
Published 2023 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Non-coding RNAs in human health and disease: potential function as biomarkers and therapeutic targets
Authors
Keywords
-
Journal
FUNCTIONAL & INTEGRATIVE GENOMICS
Volume 23, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2023-01-10
DOI
10.1007/s10142-022-00947-4
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Transposable Elements and Human Diseases: Mechanisms and Implication in the Response to Environmental Pollutants
- (2022) Benoît Chénais INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Micro RNAs as potential biomarkers in tuberculosis: A systematic review
- (2022) Bijay Pattnaik et al. Non-coding RNA Research
- The administration of antisense oligonucleotide golodirsen reduces pathological regeneration in patients with Duchenne muscular dystrophy
- (2021) Dominic Scaglioni et al. Acta Neuropathologica Communications
- Inclisiran: First Approval
- (2021) Yvette N. Lamb DRUGS
- CIRCexplorer pipelines for circRNA annotation and quantification from non-polyadenylated RNA-seq datasets
- (2021) Xu-Kai Ma et al. METHODS
- Casimersen: First Approval
- (2021) Matt Shirley DRUGS
- CRISPR/Cas: a Nobel Prize award-winning precise genome editing technology for gene therapy and crop improvement
- (2021) Chao Li et al. Journal of Zhejiang University-SCIENCE B
- Emerging role of non‐coding RNA in health and disease
- (2021) Gurjit Kaur Bhatti et al. METABOLIC BRAIN DISEASE
- Successful defibrotide treatment of a patient with veno-occlusive disease after living-donor liver transplantation
- (2021) Tae Beom Lee et al. MEDICINE
- Noncoding RNA therapeutics — challenges and potential solutions
- (2021) Melanie Winkle et al. NATURE REVIEWS DRUG DISCOVERY
- circMine: a comprehensive database to integrate, analyze and visualize human disease–related circRNA transcriptome
- (2021) Wenliang Zhang et al. NUCLEIC ACIDS RESEARCH
- Non-Coding RNA as Biomarkers for Type 2 Diabetes Development and Clinical Management
- (2021) Tiange Chi et al. Frontiers in Endocrinology
- Transposons: Unexpected players in cancer
- (2021) Rajesh Kumar Pradhan et al. GENE
- Application of the CRISPR/Cas9-based gene editing technique in basic research, diagnosis, and therapy of cancer
- (2021) Huimin Zhang et al. Molecular Cancer
- LncRNAWiki 2.0: a knowledgebase of human long non-coding RNAs with enhanced curation model and database system
- (2021) Lin Liu et al. NUCLEIC ACIDS RESEARCH
- RNAInter v4.0: RNA interactome repository with redefined confidence scoring system and improved accessibility
- (2021) Juanjuan Kang et al. NUCLEIC ACIDS RESEARCH
- UFold: fast and accurate RNA secondary structure prediction with deep learning
- (2021) Laiyi Fu et al. NUCLEIC ACIDS RESEARCH
- The Emerging Role of Non-Coding RNAs in Osteoarthritis
- (2021) Soudeh Ghafouri-Fard et al. Frontiers in Immunology
- Deregulation of ncRNA in Neurodegenerative Disease: Focus on circRNA, lncRNA and miRNA in Amyotrophic Lateral Sclerosis
- (2021) Paola Ruffo et al. Frontiers in Genetics
- Long non-coding RNAs: Biogenesis, functions, and clinical significance in gastric cancer
- (2021) Ying Liu et al. Molecular Therapy-Oncolytics
- Efficacy and safety of the CVnCoV SARS-CoV-2 mRNA vaccine candidate in ten countries in Europe and Latin America (HERALD): a randomised, observer-blinded, placebo-controlled, phase 2b/3 trial
- (2021) Peter G Kremsner et al. LANCET INFECTIOUS DISEASES
- LncRNA MIAT/miR-133a-3p axis regulates atrial fibrillation and atrial fibrillation-induced myocardial fibrosis
- (2020) Lixia Yao et al. MOLECULAR BIOLOGY REPORTS
- Acrylonitrile‐Mediated Nascent RNA Sequencing for Transcriptome‐Wide Profiling of Cellular RNA Dynamics
- (2020) Yuqi Chen et al. Advanced Science
- Lnc-Ang362 is a pro-fibrotic long non-coding RNA promoting cardiac fibrosis after myocardial infarction by suppressing Smad7
- (2020) Guo Chen et al. ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS
- RIC-seq for global in situ profiling of RNA–RNA spatial interactions
- (2020) Zhaokui Cai et al. NATURE
- The biogenesis and functions of piRNAs in human diseases
- (2020) Xi Wu et al. Molecular Therapy-Nucleic Acids
- Single‐Dose Pharmacokinetics and Pharmacodynamics of Transthyretin Targeting N‐acetylgalactosamine–Small Interfering Ribonucleic Acid Conjugate, Vutrisiran, in Healthy Subjects
- (2020) Bahru A. Habtemariam et al. CLINICAL PHARMACOLOGY & THERAPEUTICS
- An RNA vaccine drives immunity in checkpoint-inhibitor-treated melanoma
- (2020) Ugur Sahin et al. NATURE
- Phase 3 Trial of RNAi Therapeutic Givosiran for Acute Intermittent Porphyria
- (2020) Manisha Balwani et al. NEW ENGLAND JOURNAL OF MEDICINE
- Long Noncoding RNAs and Circular RNAs in Autoimmune Diseases
- (2020) Valeria Lodde et al. Biomolecules
- Synthetic mRNA Encoding VEGF-A in Patients Undergoing Coronary Artery Bypass Grafting: Design of a Phase 2a Clinical Trial
- (2020) Vesa Anttila et al. Molecular Therapy-Methods & Clinical Development
- Safety, Efficacy and Pharcacokinetics of Targeted Therapy with The Liposomal RNA Interference Therapeutic Atu027 Combined with Gemcitabine in Patients with Pancreatic Adenocarcinoma. A Randomized Phase Ib/IIa Study
- (2020) Beate Schultheis et al. Cancers
- Circular RNA Signature in Lung Adenocarcinoma: A MiOncoCirc Database-Based Study and Literature Review
- (2020) Shikang Zhao et al. Frontiers in Oncology
- Efficacy and Safety of the mRNA-1273 SARS-CoV-2 Vaccine
- (2020) Lindsey R. Baden et al. NEW ENGLAND JOURNAL OF MEDICINE
- Safety and Efficacy of the BNT162b2 mRNA Covid-19 Vaccine
- (2020) Fernando P. Polack et al. NEW ENGLAND JOURNAL OF MEDICINE
- Long non-coding RNA LICPAR regulates atrial fibrosis via TGF-β/Smad pathway in atrial fibrillation
- (2020) Haiyan Wang et al. TISSUE & CELL
- microRNAs Biogenesis, Functions and Role in Tumor Angiogenesis
- (2020) Tiziana Annese et al. Frontiers in Oncology
- LncRNA17A regulates autophagy and apoptosis of SH-SY5Y cell line as an in vitro model for Alzheimer’s disease
- (2019) Xinhua Wang et al. BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY
- An Open‐Label, Multicenter, Phase I, Dose Escalation Study with Phase II Expansion Cohort to Determine the Safety, Pharmacokinetics, and Preliminary Antitumor Activity of Intravenous TKM‐080301 in Subjects with Advanced Hepatocellular Carcinoma
- (2019) Imane El Dika et al. ONCOLOGIST
- DMfold: A Novel Method to Predict RNA Secondary Structure With Pseudoknots Based on Deep Learning and Improved Base Pair Maximization Principle
- (2019) Linyu Wang et al. Frontiers in Genetics
- Opportunities and challenges for the use of induced pluripotent stem cells in modelling neurodegenerative disease
- (2019) Yi-Ying Wu et al. Open Biology
- SELER: a database of super-enhancer-associated lncRNA- directed transcriptional regulation in human cancers
- (2019) Zhi-Wei Guo et al. Database-The Journal of Biological Databases and Curation
- QRNAS: software tool for refinement of nucleic acid structures
- (2019) Juliusz Stasiewicz et al. BMC STRUCTURAL BIOLOGY
- The overexpression of lncRNA H19 as a diagnostic marker for coronary artery disease
- (2019) Gang Xiong et al. Revista da Associacao Medica Brasileira
- Genome-wide colocalization of RNA–DNA interactions and fusion RNA pairs
- (2019) Zhangming Yan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- CPPred: coding potential prediction based on the global description of RNA sequence
- (2019) Xiaoxue Tong et al. NUCLEIC ACIDS RESEARCH
- Long noncoding RNA UCA1 inhibits ischaemia/reperfusion injury induced cardiomyocytes apoptosis via suppression of endoplasmic reticulum stress
- (2019) Jing Chen et al. Genes & Genomics
- Emerging PEGylated non-biologic drugs
- (2019) Eun Ji Park et al. EXPERT OPINION ON EMERGING DRUGS
- TRNA-derived fragments as sex-dependent circulating candidate biomarkers for Parkinson's disease
- (2019) Rogan Magee et al. PARKINSONISM & RELATED DISORDERS
- LncRRIsearch: A Web Server for lncRNA-RNA Interaction Prediction Integrated With Tissue-Specific Expression and Subcellular Localization Data
- (2019) Tsukasa Fukunaga et al. Frontiers in Genetics
- Suppression of long noncoding RNA TTTY15 attenuates hypoxia-induced cardiomyocytes injury by targeting miR-455-5p
- (2019) Songqun Huang et al. GENE
- [PROVISIONAL] Association of long non-coding RNA MIAT and MALAT1 expression profiles in peripheral blood of coronary artery disease patients with previous cardiac events
- (2019) Eman A. Toraih et al. GENETICS AND MOLECULAR BIOLOGY
- Gene Therapy for Methylmalonic Acidemia: Past, Present, and Future
- (2019) Randy Joseph Chandler et al. HUMAN GENE THERAPY
- Advances in gene therapy for cystic fibrosis lung disease
- (2019) Ziying Yan et al. HUMAN MOLECULAR GENETICS
- Upregulation of the lncRNA MEG3 improves cognitive impairment, alleviates neuronal damage, and inhibits activation of astrocytes in hippocampus tissues in Alzheimer's disease through inactivating the PI3K/Akt signaling pathway
- (2019) Jiping Yi et al. JOURNAL OF CELLULAR BIOCHEMISTRY
- RNA proximity sequencing reveals the spatial organization of the transcriptome in the nucleus
- (2019) Jörg Morf et al. NATURE BIOTECHNOLOGY
- CNIT: a fast and accurate web tool for identifying protein-coding and long non-coding transcripts based on intrinsic sequence composition
- (2019) Jin-Cheng Guo et al. NUCLEIC ACIDS RESEARCH
- Small Nucleolar RNAs: Insight Into Their Function in Cancer
- (2019) Junnan Liang et al. Frontiers in Oncology
- LncRNA HOTAIR targets miR-126-5p to promote the progression of Parkinson’s disease through RAB3IP
- (2019) Qiuyu Lin et al. BIOLOGICAL CHEMISTRY
- SINEUP Non-coding RNA Targeting GDNF Rescues Motor Deficits and Neurodegeneration in a Mouse Model of Parkinson’s Disease
- (2019) Stefano Espinoza et al. MOLECULAR THERAPY
- Comprehensive characterization of circular RNAs in ~ 1000 human cancer cell lines
- (2019) Hang Ruan et al. Genome Medicine
- Long non-coding RNAs H19, MALAT1 and MIAT as potential novel biomarkers for diagnosis of acute myocardial infarction
- (2019) Xue-Mei Wang et al. BIOMEDICINE & PHARMACOTHERAPY
- LncRNA NRON alleviates atrial fibrosis through suppression of M1 macrophages activated by atrial myocytes
- (2019) Fei Sun et al. BIOSCIENCE REPORTS
- The Role of Non-coding RNAs in Oncology
- (2019) Frank J. Slack et al. CELL
- Downregulated lncRNA-SNHG1 enhances autophagy and prevents cell death through the miR-221/222 /p27/mTOR pathway in Parkinson's disease
- (2019) Chen Qian et al. EXPERIMENTAL CELL RESEARCH
- RNA sequencing profiling reveals key mRNAs and long noncoding RNAs in atrial fibrillation
- (2019) Zun‐Ping Ke et al. JOURNAL OF CELLULAR BIOCHEMISTRY
- Patient-Customized Oligonucleotide Therapy for a Rare Genetic Disease
- (2019) Jinkuk Kim et al. NEW ENGLAND JOURNAL OF MEDICINE
- MirGeneDB 2.0: the metazoan microRNA complement
- (2019) Bastian Fromm et al. NUCLEIC ACIDS RESEARCH
- Discovery and preclinical evaluation of anti-miR-17 oligonucleotide RGLS4326 for the treatment of polycystic kidney disease
- (2019) Edmund C. Lee et al. Nature Communications
- Analysis of long non-coding RNA and mRNA profiles in epicardial adipose tissue of patients with atrial fibrillation
- (2019) Lei Zhao et al. BIOMEDICINE & PHARMACOTHERAPY
- CircSNCA downregulation by pramipexole treatment mediates cell apoptosis and autophagy in Parkinson’s disease by targeting miR-7
- (2018) Qiuling Sang et al. Aging-US
- The Long Noncoding RNA LnRPT Is Regulated by PDGF-BB and Modulates the Proliferation of Pulmonary Artery Smooth Muscle Cells
- (2018) Jidong Chen et al. AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY
- Long noncoding RNA FTX regulates cardiomyocyte apoptosis by targeting miR-29b-1-5p and Bcl2l2
- (2018) Bo Long et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- The lncLocator: a subcellular localization predictor for long non-coding RNAs based on a stacked ensemble classifier
- (2018) Zhen Cao et al. BIOINFORMATICS
- A long noncoding RNA from the HBS1L-MYB intergenic region on chr6q23 regulates human fetal hemoglobin expression
- (2018) Tasha A. Morrison et al. BLOOD CELLS MOLECULES AND DISEASES
- Relationship of cardiovascular disease risk factors and noncoding RNAs with hypertension: a case-control study
- (2018) Shiying Chen et al. BMC Cardiovascular Disorders
- Plasma long non-coding RNA BACE1 as a novel biomarker for diagnosis of Alzheimer disease
- (2018) Liang Feng et al. BMC Neurology
- Long non-coding RNA NEAT1 mediates the toxic of Parkinson's disease induced by MPTP/MPP+ via regulation of gene expression
- (2018) Ying Liu et al. CLINICAL AND EXPERIMENTAL PHARMACOLOGY AND PHYSIOLOGY
- Long noncoding RNA upregulated in hypothermia treated cardiomyocytes protects against myocardial infarction through improving mitochondrial function
- (2018) Jian Zhang et al. INTERNATIONAL JOURNAL OF CARDIOLOGY
- The role of Alu-derived RNAs in Alzheimer’s and other neurodegenerative conditions
- (2018) Oksana Polesskaya et al. MEDICAL HYPOTHESES
- Perturbations in the p53/miR-34a/SIRT1 pathway in the R6/2 Huntington's disease model
- (2018) Regina Hertfelder Reynolds et al. MOLECULAR AND CELLULAR NEUROSCIENCE
- TimeLapse-seq: adding a temporal dimension to RNA sequencing through nucleoside recoding
- (2018) Jeremy A Schofield et al. NATURE METHODS
- Identification of the biological affection of long noncoding RNA BC200 in Alzheimer’s disease
- (2018) Huanyin Li et al. NEUROREPORT
- Patisiran, an RNAi Therapeutic, for Hereditary Transthyretin Amyloidosis
- (2018) David Adams et al. NEW ENGLAND JOURNAL OF MEDICINE
- Inotersen Treatment for Patients with Hereditary Transthyretin Amyloidosis
- (2018) Merrill D. Benson et al. NEW ENGLAND JOURNAL OF MEDICINE
- Nusinersen versus Sham Control in Later-Onset Spinal Muscular Atrophy
- (2018) Eugenio Mercuri et al. NEW ENGLAND JOURNAL OF MEDICINE
- nextPARS: parallel probing of RNA structures in Illumina
- (2018) Ester Saus et al. RNA
- Single-cell full-length total RNA sequencing uncovers dynamics of recursive splicing and enhancer RNAs
- (2018) Tetsutaro Hayashi et al. Nature Communications
- LnChrom: a resource of experimentally validated lncRNA–chromatin interactions in human and mouse
- (2018) Fulong Yu et al. Database-The Journal of Biological Databases and Curation
- Long non-coding and coding RNAs characterization in Peripheral Blood Mononuclear Cells and Spinal Cord from Amyotrophic Lateral Sclerosis patients
- (2018) Stella Gagliardi et al. Scientific Reports
- Chromatin-associated RNA sequencing (ChAR-seq) maps genome-wide RNA-to-DNA contacts
- (2018) Jason C Bell et al. eLife
- Long Noncoding RNA (lncRNA) n379519 Promotes Cardiac Fibrosis in Post-Infarct Myocardium by Targeting miR-30
- (2018) Xiaxia Wang et al. MEDICAL SCIENCE MONITOR
- Supplemental Treatment for Huntington’s Disease with miR-132 that Is Deficient in Huntington’s Disease Brain
- (2018) Masashi Fukuoka et al. Molecular Therapy-Nucleic Acids
- YY1-induced upregulation of lncRNA KCNQ1OT1 regulates angiotensin II-induced atrial fibrillation by modulating miR-384b/CACNA1C axis
- (2018) Caijie Shen et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- DASHR 2.0: integrated database of human small non-coding RNA genes and mature products
- (2018) Pavel P Kuksa et al. BIOINFORMATICS
- The long noncoding RNA NEAT1 is elevated in polyglutamine repeat expansion diseases and protects from disease-gene dependent toxicities
- (2018) Congsheng Cheng et al. HUMAN MOLECULAR GENETICS
- The Biogenesis, Functions, and Challenges of Circular RNAs
- (2018) Xiang Li et al. MOLECULAR CELL
- Functional classification of long non-coding RNAs by k-mer content
- (2018) Jessime M. Kirk et al. NATURE GENETICS
- Small-seq for single-cell small-RNA sequencing
- (2018) Michael Hagemann-Jensen et al. Nature Protocols
- OUP accepted manuscript
- (2018) NUCLEIC ACIDS RESEARCH
- miRWalk: An online resource for prediction of microRNA binding sites
- (2018) Carsten Sticht et al. PLoS One
- lncSLdb: a resource for long non-coding RNA subcellular localization
- (2018) Xiao Wen et al. Database-The Journal of Biological Databases and Curation
- CIRCpedia v2: An Updated Database for Comprehensive Circular RNA Annotation and Expression Comparison
- (2018) Rui Dong et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- Long noncoding RNA Meg3 regulates cardiomyocyte apoptosis in myocardial infarction
- (2018) Hongchun Wu et al. GENE THERAPY
- Overexpression of microRNA-183 promotes apoptosis of substantia nigra neurons via the inhibition of OSMR in a mouse model of Parkinson's disease
- (2018) Jin-Xia Gao et al. INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE
- Long noncoding RNA LINC00968 promotes endothelial cell proliferation and migration via regulating miR-9-3p expression
- (2018) Xiaofeng Wang et al. JOURNAL OF CELLULAR BIOCHEMISTRY
- Higher-Order Organization Principles of Pre-translational mRNPs
- (2018) Mihir Metkar et al. MOLECULAR CELL
- Suppressed microRNA-96 inhibits iNOS expression and dopaminergic neuron apoptosis through inactivating the MAPK signaling pathway by targeting CACNG5 in mice with Parkinson’s disease
- (2018) Yue Dong et al. MOLECULAR MEDICINE
- HMDD v3.0: a database for experimentally supported human microRNA–disease associations
- (2018) Zhou Huang et al. NUCLEIC ACIDS RESEARCH
- LncBook: a curated knowledgebase of human long non-coding RNAs
- (2018) Lina Ma et al. NUCLEIC ACIDS RESEARCH
- TransmiR v2.0: an updated transcription factor-microRNA regulation database
- (2018) Zhan Tong et al. NUCLEIC ACIDS RESEARCH
- Lnc2Cancer v2.0: updated database of experimentally supported long non-coding RNAs in human cancers
- (2018) Yue Gao et al. NUCLEIC ACIDS RESEARCH
- EVmiRNA: a database of miRNA profiling in extracellular vesicles
- (2018) Teng Liu et al. NUCLEIC ACIDS RESEARCH
- RNAcentral: a hub of information for non-coding RNA sequences
- (2018) et al. NUCLEIC ACIDS RESEARCH
- miRBase: from microRNA sequences to function
- (2018) Ana Kozomara et al. NUCLEIC ACIDS RESEARCH
- Identification and epigenetic analysis of divergent long non-coding RNAs in multilineage differentiation of human Neural Progenitor Cells
- (2018) Bharat Prajapati et al. RNA Biology
- SFPEL-LPI: Sequence-based feature projection ensemble learning for predicting LncRNA-protein interactions
- (2018) Wen Zhang et al. PLoS Computational Biology
- Long noncoding RNA NEXN-AS1 mitigates atherosclerosis by regulating the actin-binding protein NEXN
- (2018) Yan-Wei Hu et al. JOURNAL OF CLINICAL INVESTIGATION
- Transitioning from usual care to biomarker-based personalized and precision medicine in heart failure: call for action
- (2017) Antoni Bayes-Genis et al. EUROPEAN HEART JOURNAL
- AK098656, a Novel Vascular Smooth Muscle Cell–Dominant Long Noncoding RNA, Promotes HypertensionNovelty and Significance
- (2017) Ling Jin et al. HYPERTENSION
- High Class-Imbalance in pre-miRNA Prediction: A Novel Approach Based on deepSOM
- (2017) Georgina Stegmayer et al. IEEE-ACM Transactions on Computational Biology and Bioinformatics
- MiR-155 enhances phagocytic activity of β-thalassemia/HbE monocytes via targeting of BACH1
- (2017) Kanitta Srinoun et al. INTERNATIONAL JOURNAL OF HEMATOLOGY
- BCL11A mRNA Targeting by miR-210: A Possible Network Regulating γ-Globin Gene Expression
- (2017) Jessica Gasparello et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Altered long non-coding RNA expression profile in rabbit atria with atrial fibrillation: TCONS_00075467 modulates atrial electrical remodeling by sponging miR-328 to regulate CACNA1C
- (2017) Zhan Li et al. JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY
- Safety and activity of microRNA-loaded minicells in patients with recurrent malignant pleural mesothelioma: a first-in-man, phase 1, open-label, dose-escalation study
- (2017) Nico van Zandwijk et al. LANCET ONCOLOGY
- ParSel: Parallel Selection of Micro-RNAs for Survival Classification in Cancers
- (2017) Debajyoti Sinha et al. Molecular Informatics
- Plasma microRNA-451 as a novel hemolytic marker for β0-thalassemia/HbE disease
- (2017) Kamonlak Leecharoenkiat et al. Molecular Medicine Reports
- Expression of BC1 Impairs Spatial Learning and Memory in Alzheimer’s Disease Via APP Translation
- (2017) Tongmei Zhang et al. MOLECULAR NEUROBIOLOGY
- A Peptide Nucleic Acid against MicroRNA miR-145-5p Enhances the Expression of the Cystic Fibrosis Transmembrane Conductance Regulator (CFTR) in Calu-3 Cells
- (2017) Enrica Fabbri et al. MOLECULES
- GRID-seq reveals the global RNA–chromatin interactome
- (2017) Xiao Li et al. NATURE BIOTECHNOLOGY
- Thiol-linked alkylation of RNA to assess expression dynamics
- (2017) Veronika A Herzog et al. NATURE METHODS
- Noncoding RNAs in neurodegeneration
- (2017) Evgenia Salta et al. NATURE REVIEWS NEUROSCIENCE
- Micro-RNA expression in muscle and fiber morphometry in myotonic dystrophy type 1
- (2017) Chiara Fritegotto et al. NEUROLOGICAL SCIENCES
- OUP accepted manuscript
- (2017) NUCLEIC ACIDS RESEARCH
- Identification of active miRNA promoters from nuclear run-on RNA sequencing
- (2017) Qi Liu et al. NUCLEIC ACIDS RESEARCH
- mirDIP 4.1—integrative database of human microRNA target predictions
- (2017) Tomas Tokar et al. NUCLEIC ACIDS RESEARCH
- Mirnovo: genome-free prediction of microRNAs from small RNA sequencing data and single-cells using decision forests
- (2017) Dimitrios M. Vitsios et al. NUCLEIC ACIDS RESEARCH
- IntaRNA 2.0: enhanced and customizable prediction of RNA–RNA interactions
- (2017) Martin Mann et al. NUCLEIC ACIDS RESEARCH
- From benchmarking HITS-CLIP peak detection programs to a new method for identification of miRNA-binding sites from Ago2-CLIP data
- (2017) Silvia Bottini et al. NUCLEIC ACIDS RESEARCH
- CSCD: a database for cancer-specific circular RNAs
- (2017) Siyu Xia et al. NUCLEIC ACIDS RESEARCH
- miRTarBase update 2018: a resource for experimentally validated microRNA-target interactions
- (2017) Chih-Hung Chou et al. NUCLEIC ACIDS RESEARCH
- MINTbase v2.0: a comprehensive database for tRNA-derived fragments that includes nuclear and mitochondrial fragments from all The Cancer Genome Atlas projects
- (2017) Venetia Pliatsika et al. NUCLEIC ACIDS RESEARCH
- DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions
- (2017) Dimitra Karagkouni et al. NUCLEIC ACIDS RESEARCH
- Down-regulation of miR-9* in the peripheral leukocytes of Huntington’s disease patients
- (2017) Kuo-Hsuan Chang et al. Orphanet Journal of Rare Diseases
- LncATLAS database for subcellular localization of long noncoding RNAs
- (2017) David Mas-Ponte et al. RNA
- The long noncoding RNA Wisper controls cardiac fibrosis and remodeling
- (2017) Rudi Micheletti et al. Science Translational Medicine
- Prognostic value of miRNA-155 expression in B-cell Non-Hodgkin's lymphoma
- (2017) Ahmed M. L. Bedewy et al. Turkish Journal of Hematology
- MicroRNA-9 downregulates the ANO1 chloride channel and contributes to cystic fibrosis lung pathology
- (2017) Florence Sonneville et al. Nature Communications
- NRDTD: a database for clinically or experimentally supported non-coding RNAs and drug targets associations
- (2017) Xing Chen et al. Database-The Journal of Biological Databases and Curation
- The long noncoding RNA HOTAIR promotes Parkinson's disease by upregulating LRRK2 expression
- (2017) Sheng Wang et al. Oncotarget
- Non-coding RNA: a potential biomarker and therapeutic target for sepsis
- (2017) Tie-Ning Zhang et al. Oncotarget
- LncRNA BANCR facilitates vascular smooth muscle cell proliferation and migration through JNK pathway
- (2017) He Li et al. Oncotarget
- miRsig: a consensus-based network inference methodology to identify pan-cancer miRNA-miRNA interaction signatures
- (2017) Joseph J. Nalluri et al. Scientific Reports
- miR-196a Enhances Neuronal Morphology through Suppressing RANBP10 to Provide Neuroprotection in Huntington's Disease
- (2017) Lu-Shiun Her et al. Theranostics
- Live-cell mapping of organelle-associated RNAs via proximity biotinylation combined with protein-RNA crosslinking
- (2017) Pornchai Kaewsapsak et al. eLife
- Bronchial Epithelial Cells from Cystic Fibrosis Patients Express a Specific Long Non-coding RNA Signature upon Pseudomonas aeruginosa Infection
- (2017) Viviane Balloy et al. Frontiers in Cellular and Infection Microbiology
- isomiR2Function: An Integrated Workflow for Identifying MicroRNA Variants in Plants
- (2017) Kun Yang et al. Frontiers in Plant Science
- Changes in lncRNAs and related genes in β-thalassemia minor and β-thalassemia major
- (2017) Jing Ma et al. Frontiers of Medicine
- Identification of miRNA, lncRNA and mRNA-associated ceRNA networks and potential biomarker for MELAS with mitochondrial DNA A3243G mutation
- (2017) Wei Wang et al. Scientific Reports
- Increased plasma levels of lncRNA H19 and LIPCAR are associated with increased risk of coronary artery disease in a Chinese population
- (2017) Zhen Zhang et al. Scientific Reports
- microRNA-181b is increased in cystic fibrosis cells and impairs lipoxin A4 receptor-dependent mechanisms of inflammation resolution and antimicrobial defense
- (2017) Anna Maria Pierdomenico et al. Scientific Reports
- A phase I dose-escalation study of apatorsen (OGX-427), an antisense inhibitor targeting heat shock protein 27 (Hsp27), in patients with castration-resistant prostate cancer and other advanced cancers
- (2016) K. N. Chi et al. ANNALS OF ONCOLOGY
- lnCaNet: pan-cancer co-expression network for human lncRNA and cancer genes
- (2016) Yining Liu et al. BIOINFORMATICS
- miRNAmeConverter: an R/bioconductor package for translating mature miRNA names to different miRBase versions
- (2016) Stefan J. Haunsberger et al. BIOINFORMATICS
- IsomiR Bank: a research resource for tracking IsomiRs
- (2016) Yuanwei Zhang et al. BIOINFORMATICS
- Long Noncoding RNA MHRT Protects Cardiomyocytes against H2O2-Induced Apoptosis
- (2016) Jianying Zhang et al. Biomolecules & Therapeutics
- Comprehensive characterization of tissue-specific circular RNAs in the human and mouse genomes
- (2016) Siyu Xia et al. BRIEFINGS IN BIOINFORMATICS
- RNA Duplex Map in Living Cells Reveals Higher-Order Transcriptome Structure
- (2016) Zhipeng Lu et al. CELL
- The long noncoding RNA NRF regulates programmed necrosis and myocardial injury during ischemia and reperfusion by targeting miR-873
- (2016) K Wang et al. CELL DEATH AND DIFFERENTIATION
- Pitx2 Adjacent Noncoding RNA
- (2016) Andrew P. Holmes et al. Circulation-Arrhythmia and Electrophysiology
- Polymorphisms in the long non-coding RNA CDKN2B-AS1 may contribute to higher systolic blood pressure levels in hypertensive patients
- (2016) Burcu Bayoglu et al. CLINICAL BIOCHEMISTRY
- MicroRNA screening identifies a link between NOVA1 expression and a low level of IKAP in familial dysautonomia
- (2016) Mylène Hervé et al. Disease Models & Mechanisms
- Profiling and validation of circulating microRNAs for cardiovascular events in patients presenting with ST-segment elevation myocardial infarction
- (2016) Philipp Jakob et al. EUROPEAN HEART JOURNAL
- Long Noncoding RNA-GAS5Novelty and Significance
- (2016) Yang-Ning-Zhi Wang et al. HYPERTENSION
- MiRTDL: A Deep Learning Approach for miRNA Target Prediction
- (2016) Shuang Cheng et al. IEEE-ACM Transactions on Computational Biology and Bioinformatics
- Elevated levels of miR-210 correlate with anemia in β-thalassemia/HbE patients
- (2016) Panjaree Siwaponanan et al. INTERNATIONAL JOURNAL OF HEMATOLOGY
- Phase I study of MRX34, a liposomal miR-34a mimic, administered twice weekly in patients with advanced solid tumors
- (2016) Muhammad S. Beg et al. INVESTIGATIONAL NEW DRUGS
- ExoCarta: A Web-Based Compendium of Exosomal Cargo
- (2016) Shivakumar Keerthikumar et al. JOURNAL OF MOLECULAR BIOLOGY
- An Investigational RNAi Therapeutic Targeting Glycolate Oxidase Reduces Oxalate Production in Models of Primary Hyperoxaluria
- (2016) Abigail Liebow et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- Long noncoding RNA dysregulation in ischemic heart failure
- (2016) Simona Greco et al. Journal of Translational Medicine
- Circulating “LncPPARδ” From Monocytes as a Novel Biomarker for Coronary Artery Diseases
- (2016) Yue Cai et al. MEDICINE
- In Vivo Mapping of Eukaryotic RNA Interactomes Reveals Principles of Higher-Order Organization and Regulation
- (2016) Jong Ghut Ashley Aw et al. MOLECULAR CELL
- Global Mapping of Human RNA-RNA Interactions
- (2016) Eesha Sharma et al. MOLECULAR CELL
- miR-27a and miR-27b regulate autophagic clearance of damaged mitochondria by targeting PTEN-induced putative kinase 1 (PINK1)
- (2016) Jaekwang Kim et al. Molecular Neurodegeneration
- Long Non-coding RNA BGas Regulates the Cystic Fibrosis Transmembrane Conductance Regulator
- (2016) Sheena M Saayman et al. MOLECULAR THERAPY
- The long noncoding RNA Chaer defines an epigenetic checkpoint in cardiac hypertrophy
- (2016) Zhihua Wang et al. NATURE MEDICINE
- C-C motif-ligand 2 inhibition with emapticap pegol (NOX-E36) in type 2 diabetic patients with albuminuria
- (2016) Jan Menne et al. NEPHROLOGY DIALYSIS TRANSPLANTATION
- FARNA: knowledgebase of inferred functions of non-coding RNA transcripts
- (2016) Tanvir Alam et al. NUCLEIC ACIDS RESEARCH
- YM500v3: a database for small RNA sequencing in human cancer research
- (2016) I-Fang Chung et al. NUCLEIC ACIDS RESEARCH
- miRTar2GO: a novel rule-based model learning method for cell line specific microRNA target prediction that integrates Ago2 CLIP-Seq and validated microRNA–target interaction data
- (2016) Alireza Ahadi et al. NUCLEIC ACIDS RESEARCH
- LNCediting: a database for functional effects of RNA editing in lncRNAs
- (2016) Jing Gong et al. NUCLEIC ACIDS RESEARCH
- ChIPBase v2.0: decoding transcriptional regulatory networks of non-coding RNAs and protein-coding genes from ChIP-seq data
- (2016) Ke-Ren Zhou et al. NUCLEIC ACIDS RESEARCH
- tRF2Cancer: A web server to detect tRNA-derived small RNA fragments (tRFs) and their expression in multiple cancers
- (2016) Ling-Ling Zheng et al. NUCLEIC ACIDS RESEARCH
- Distribution of miRNA expression across human tissues
- (2016) Nicole Ludwig et al. NUCLEIC ACIDS RESEARCH
- Circular RNA profile in gliomas revealed by identification tool UROBORUS
- (2016) Xiaofeng Song et al. NUCLEIC ACIDS RESEARCH
- Non-coding RNAs in Development and Disease: Background, Mechanisms, and Therapeutic Approaches
- (2016) Julia Beermann et al. PHYSIOLOGICAL REVIEWS
- Long noncoding RNA Chast promotes cardiac remodeling
- (2016) Janika Viereck et al. Science Translational Medicine
- Noncoding RNAs and Duchenne muscular dystrophy
- (2016) Mark M Perry et al. Epigenomics
- Mapping RNA–RNA interactome and RNA structure in vivo by MARIO
- (2016) Tri C. Nguyen et al. Nature Communications
- Reciprocal Changes of Circulating Long Non-Coding RNAs ZFAS1 and CDR1AS Predict Acute Myocardial Infarction
- (2016) Ying Zhang et al. Scientific Reports
- iSeeRNA: identification of long intergenic non-coding RNA transcripts from transcriptome sequencing data
- (2016) Kun Sun et al. BMC GENOMICS
- miTALOS v2: Analyzing Tissue Specific microRNA Function
- (2016) Martin Preusse et al. PLoS One
- miR-196a Ameliorates Cytotoxicity and Cellular Phenotype in Transgenic Huntington’s Disease Monkey Neural Cells
- (2016) Tanut Kunkanjanawan et al. PLoS One
- circRNADb: A comprehensive database for human circular RNAs with protein-coding annotations
- (2016) Xiaoping Chen et al. Scientific Reports
- Acfs: accurate circRNA identification and quantification from RNA-Seq data
- (2016) Xintian You et al. Scientific Reports
- Annocript: a flexible pipeline for the annotation of transcriptomes able to identify putative long noncoding RNAs
- (2015) F. Musacchia et al. BIOINFORMATICS
- Specific identification and quantification of circular RNAs from sequencing data
- (2015) Jun Cheng et al. BIOINFORMATICS
- Chimira: analysis of small RNA sequencing data and microRNA modifications: Fig. 1.
- (2015) Dimitrios M. Vitsios et al. BIOINFORMATICS
- DREAM: a webserver for the identification of editing sites in mature miRNAs using deep sequencing data
- (2015) Shahar Alon et al. BIOINFORMATICS
- Long non-coding RNA-DANCR in human circulating monocytes: a potential biomarker associated with postmenopausal osteoporosis
- (2015) Xiang Tong et al. BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY
- LncRNA2Function: a comprehensive resource for functional investigation of human lncRNAs based on RNA-seq data
- (2015) Qinghua Jiang et al. BMC GENOMICS
- miR-10b-5p expression in Huntington’s disease brain relates to age of onset and the extent of striatal involvement
- (2015) Andrew G Hoss et al. BMC Medical Genomics
- Comprehensive Genomic Characterization of Long Non-coding RNAs across Human Cancers
- (2015) Xiaohui Yan et al. CANCER CELL
- TANRIC: An Interactive Open Platform to Explore the Function of lncRNAs in Cancer
- (2015) Jun Li et al. CANCER RESEARCH
- A Micropeptide Encoded by a Putative Long Noncoding RNA Regulates Muscle Performance
- (2015) Douglas M. Anderson et al. CELL
- Long Noncoding RNAs and MicroRNAs in Cardiovascular Pathophysiology
- (2015) T. Thum et al. CIRCULATION RESEARCH
- Plasma long non-coding RNA, CoroMarker, a novel biomarker for diagnosis of coronary artery disease
- (2015) Yujia Yang et al. CLINICAL SCIENCE
- Plasma miR-1, miR-208, miR-499 as potential predictive biomarkers for acute myocardial infarction: An independent study of Han population
- (2015) Xian Liu et al. EXPERIMENTAL GERONTOLOGY
- Transcriptome Analysis of Canine Cardiac Fat Pads: Involvement of Two Novel Long Non-Coding RNAs in Atrial Fibrillation Neural Remodeling
- (2015) Weizong Wang et al. JOURNAL OF CELLULAR BIOCHEMISTRY
- Mipomersen preferentially reduces small low-density lipoprotein particle number in patients with hypercholesterolemia
- (2015) Raul D. Santos et al. Journal of Clinical Lipidology
- Expression of circulating microRNA-1 and microRNA-133 in pediatric patients with tachycardia
- (2015) LING SUN et al. Molecular Medicine Reports
- The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3
- (2015) Colleen A. McHugh et al. NATURE
- Fluorescent in situ sequencing (FISSEQ) of RNA for gene expression profiling in intact cells and tissues
- (2015) Je Hyuk Lee et al. Nature Protocols
- SomamiR 2.0: a database of cancer somatic mutations altering microRNA–ceRNA interactions
- (2015) Anindya Bhattacharya et al. NUCLEIC ACIDS RESEARCH
- CircNet: a database of circular RNAs derived from transcriptome sequencing data
- (2015) Yu-Chen Liu et al. NUCLEIC ACIDS RESEARCH
- DIANA-miRPath v3.0: deciphering microRNA function with experimental support
- (2015) Ioannis S. Vlachos et al. NUCLEIC ACIDS RESEARCH
- NCLscan: accurate identification of non-co-linear transcripts (fusion,trans-splicing and circular RNA) with a good balance between sensitivity and precision
- (2015) Trees-Juen Chuang et al. NUCLEIC ACIDS RESEARCH
- CANTATAdb: A Collection of Plant Long Non-Coding RNAs
- (2015) Michał W. Szcześniak et al. PLANT AND CELL PHYSIOLOGY
- Expression analysis of the long non-coding RNA antisense to Uchl1 (AS Uchl1) during dopaminergic cells' differentiation in vitro and in neurochemical models of Parkinson's disease
- (2015) Claudia Carrieri et al. Frontiers in Cellular Neuroscience
- APF lncRNA regulates autophagy and myocardial infarction by targeting miR-188-3p
- (2015) Kun Wang et al. Nature Communications
- A functional variant in miR-605 modifies the age of onset in Li-Fraumeni syndrome
- (2015) Badr Id Said et al. Cancer Genetics
- miRGate: a curated database of human, mouse and rat miRNA–mRNA targets
- (2015) Eduardo Andrés-León et al. Database-The Journal of Biological Databases and Curation
- RNAi therapy targeting KRAS in combination with chemotherapy for locally advanced pancreatic cancer patients
- (2015) Talia Golan et al. Oncotarget
- Predicting effective microRNA target sites in mammalian mRNAs
- (2015) Vikram Agarwal et al. eLife
- Statistically based splicing detection reveals neural enrichment and tissue-specific induction of circular RNA during human fetal development
- (2015) Linda Szabo et al. GENOME BIOLOGY
- Single-cell RNA-seq transcriptome analysis of linear and circular RNAs in mouse preimplantation embryos
- (2015) Xiaoying Fan et al. GENOME BIOLOGY
- CIRI: an efficient and unbiased algorithm for de novo circular RNA identification
- (2015) Yuan Gao et al. GENOME BIOLOGY
- Phase I clinical trial of adoptive cellular immunotherapy with APN401 in patients with solid tumors
- (2015) Pierre Triozzi et al. Journal for ImmunoTherapy of Cancer
- MicroRNA Profiling of Atrial Fibrillation in Canines: MiR-206 Modulates Intrinsic Cardiac Autonomic Nerve Remodeling by Regulating SOD1
- (2015) Yujiao Zhang et al. PLoS One
- Transcriptome Analysis of Ullrich Congenital Muscular Dystrophy Fibroblasts Reveals a Disease Extracellular Matrix Signature and Key Molecular Regulators
- (2015) Sonia Paco et al. PLoS One
- lncRScan-SVM: A Tool for Predicting Long Non-Coding RNAs Using Support Vector Machine
- (2015) Lei Sun et al. PLoS One
- Expression of microRNA-93 and Interleukin-8 duringPseudomonas aeruginosa–Mediated Induction of Proinflammatory Responses
- (2014) Enrica Fabbri et al. AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY
- Identification of candidate long non-coding RNAs in response to myocardial infarction
- (2014) Jennifer Zangrando et al. BMC GENOMICS
- The Long Noncoding RNA CHRF Regulates Cardiac Hypertrophy by Targeting miR-489
- (2014) Kun Wang et al. CIRCULATION RESEARCH
- Long Noncoding RNAs in Patients With Acute Myocardial Infarction
- (2014) Mélanie Vausort et al. CIRCULATION RESEARCH
- Circulating Long Noncoding RNA, LIPCAR, Predicts Survival in Patients With Heart Failure
- (2014) Regalla Kumarswamy et al. CIRCULATION RESEARCH
- Assessment of microRNAs in patients with unstable angina pectoris
- (2014) Tanja Zeller et al. EUROPEAN HEART JOURNAL
- Inhibition of miR-34b and miR-34c enhances α-synuclein expression in Parkinson's disease
- (2014) Savan Kabaria et al. FEBS LETTERS
- The ROS-sensitive microRNA-9/9* controls the expression of mitochondrial tRNA-modifying enzymes and is involved in the molecular mechanism of MELAS syndrome
- (2014) Salvador Meseguer et al. HUMAN MOLECULAR GENETICS
- Long noncoding RNA are aberrantly expressed in vivo in the cystic fibrosis bronchial epithelium
- (2014) Paul J. McKiernan et al. INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY
- Anti–microRNA-21 oligonucleotides prevent Alport nephropathy progression by stimulating metabolic pathways
- (2014) Ivan G. Gomez et al. JOURNAL OF CLINICAL INVESTIGATION
- First-in-Human Phase I Study of the Liposomal RNA Interference Therapeutic Atu027 in Patients With Advanced Solid Tumors
- (2014) Beate Schultheis et al. JOURNAL OF CLINICAL ONCOLOGY
- Serum miR-206 and other muscle-specific microRNAs as non-invasive biomarkers for Duchenne muscular dystrophy
- (2014) Jun Hu et al. JOURNAL OF NEUROCHEMISTRY
- Novel Long Noncoding RNAs (lncRNAs) in Myogenesis: amiR-31Overlapping lncRNA Transcript Controls Myoblast Differentiation
- (2014) Monica Ballarino et al. MOLECULAR AND CELLULAR BIOLOGY
- An Evolutionarily Conserved Long Noncoding RNA TUNA Controls Pluripotency and Neural Lineage Commitment
- (2014) Nianwei Lin et al. MOLECULAR CELL
- Detecting and characterizing circular RNAs
- (2014) William R Jeck et al. NATURE BIOTECHNOLOGY
- The rise of regulatory RNA
- (2014) Kevin V. Morris et al. NATURE REVIEWS GENETICS
- RNAi screening comes of age: improved techniques and complementary approaches
- (2014) Stephanie E. Mohr et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- lncRNAdb v2.0: expanding the reference database for functional long noncoding RNAs
- (2014) Xiu Cheng Quek et al. NUCLEIC ACIDS RESEARCH
- miRdentify: high stringency miRNA predictor identifies several novel animal miRNAs
- (2014) Thomas B. Hansen et al. NUCLEIC ACIDS RESEARCH
- Genomic analysis of RNA localization
- (2014) J Matthew Taliaferro et al. RNA Biology
- Annotation of long non-coding RNAs expressed in Collaborative Cross founder mice in response to respiratory virus infection reveals a new class of interferon-stimulated transcripts
- (2014) Laurence Josset et al. RNA Biology
- circBase: a database for circular RNAs
- (2014) Petar Glažar et al. RNA
- miR-16-1 Promotes the Aberrantα-Synuclein Accumulation in Parkinson Disease via Targeting Heat Shock Protein 70
- (2014) Zhelin Zhang et al. TheScientificWorldJOURNAL
- Altered microRNA Expression Patterns in Hepatoblastoma Patients
- (2014) Armando Magrelli et al. Translational Oncology
- miR-7 and miR-153 protect neurons against MPP+-induced cell death via upregulation of mTOR pathway
- (2014) Apostolia Fragkouli et al. Frontiers in Cellular Neuroscience
- microTSS: accurate microRNA transcription start site identification reveals a significant number of divergent pri-miRNAs
- (2014) Georgios Georgakilas et al. Nature Communications
- CARL lncRNA inhibits anoxia-induced mitochondrial fission and apoptosis in cardiomyocytes by impairing miR-539-dependent PHB2 downregulation
- (2014) Kun Wang et al. Nature Communications
- microRNA-128a dysregulation in transgenic Huntington’s disease monkeys
- (2014) Jannet Kocerha et al. Molecular Brain
- MDRL lncRNA Regulates the Processing of miR-484 Primary Transcript by Targeting miR-361
- (2014) Kun Wang et al. PLoS Genetics
- Considerations when investigating lncRNA function in vivo
- (2014) Andrew R Bassett et al. eLife
- Non-coding RNA: a new frontier in regulatory biology
- (2014) Xiang-Dong Fu National Science Review
- miR-196a Ameliorates Phenotypes of Huntington Disease in Cell, Transgenic Mouse, and Induced Pluripotent Stem Cell Models
- (2013) Pei-Hsun Cheng et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Eteplirsen for the treatment of Duchenne muscular dystrophy
- (2013) Jerry R. Mendell et al. ANNALS OF NEUROLOGY
- Hypoxia-Inducible Factor 1 and Cardiovascular Disease
- (2013) Gregg L. Semenza Annual Review of Physiology
- MicroRNA-124 targets CCNA2 and regulates cell cycle in STHdhQ111/HdhQ111 cells
- (2013) Eashita Das et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Biogenesis and function of non-coding RNAs in muscle differentiation and in Duchenne muscular dystrophy
- (2013) Shyam Twayana et al. BIOCHEMICAL SOCIETY TRANSACTIONS
- miRCancer: a microRNA-cancer association database constructed by text mining on literature
- (2013) B. Xie et al. BIOINFORMATICS
- PHDcleav: a SVM based method for predicting human Dicer cleavage sites using sequence and secondary structure of miRNA precursors
- (2013) Firoz Ahmed et al. BMC BIOINFORMATICS
- Circulating cardio-enriched microRNAs are associated with long-term prognosis following myocardial infarction
- (2013) Olof Gidlöf et al. BMC Cardiovascular Disorders
- PASmiR: a literature-curated database for miRNA molecular regulation in plant response to abiotic stress
- (2013) Shihua Zhang et al. BMC PLANT BIOLOGY
- Non-coding RNAs in homeostasis, disease and stress responses: an evolutionary perspective
- (2013) P. P. Amaral et al. Briefings in Functional Genomics
- Novel Long Noncoding RNAs Are Regulated by Angiotensin II in Vascular Smooth Muscle Cells
- (2013) Amy Leung et al. CIRCULATION RESEARCH
- Computational Approaches in Detecting Non- Coding RNA
- (2013) Chunyu Wang et al. CURRENT GENOMICS
- A signature of circulating microRNAs differentiates takotsubo cardiomyopathy from acute myocardial infarction
- (2013) M. Jaguszewski et al. EUROPEAN HEART JOURNAL
- isomiRex: Web-based identification of microRNAs, isomiR variations and differential expression using next-generation sequencing datasets
- (2013) Gaurav Sablok et al. FEBS LETTERS
- Long Noncoding RNAs: Past, Present, and Future
- (2013) J. T. Y. Kung et al. GENETICS
- Regulation of the SK3 channel by microRNA-499—Potential role in atrial fibrillation
- (2013) Tian-You Ling et al. HEART RHYTHM
- Circulating miR-133a and miR-423-5p fail as biomarkers for left ventricular remodeling after myocardial infarction
- (2013) Christophe Bauters et al. INTERNATIONAL JOURNAL OF CARDIOLOGY
- MicroRNA-26 governs profibrillatory inward-rectifier potassium current changes in atrial fibrillation
- (2013) Xiaobin Luo et al. JOURNAL OF CLINICAL INVESTIGATION
- Regulation of Cystic Fibrosis Transmembrane Conductance Regulator by MicroRNA-145, -223, and -494 Is Altered in F508 Cystic Fibrosis Airway Epithelium
- (2013) I. K. Oglesby et al. JOURNAL OF IMMUNOLOGY
- BRIC-seq: A genome-wide approach for determining RNA stability in mammalian cells
- (2013) Naoto Imamachi et al. METHODS
- Circular RNAs are a large class of animal RNAs with regulatory potency
- (2013) Sebastian Memczak et al. NATURE
- The Genotype-Tissue Expression (GTEx) project
- (2013) John Lonsdale et al. NATURE GENETICS
- MicroRNA-494 reduces DJ-1 expression and exacerbates neurodegeneration
- (2013) Ran Xiong et al. NEUROBIOLOGY OF AGING
- Treatment of HCV Infection by Targeting MicroRNA
- (2013) Harry L.A. Janssen et al. NEW ENGLAND JOURNAL OF MEDICINE
- starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein–RNA interaction networks from large-scale CLIP-Seq data
- (2013) Jun-Hao Li et al. NUCLEIC ACIDS RESEARCH
- miRNEST 2.0: a database of plant and animal microRNAs
- (2013) Michał W. Szcześniak et al. NUCLEIC ACIDS RESEARCH
- CoRAL: predicting non-coding RNAs from small RNA-sequencing data
- (2013) Yuk Yee Leung et al. NUCLEIC ACIDS RESEARCH
- PolymiRTS Database 3.0: linking polymorphisms in microRNAs and their target sites with human diseases and biological pathways
- (2013) Anindya Bhattacharya et al. NUCLEIC ACIDS RESEARCH
- miR-411 is up-regulated in FSHD myoblasts and suppresses myogenic factors
- (2013) Naoe Harafuji et al. Orphanet Journal of Rare Diseases
- MicroRNA-486-3p Regulates γ-Globin Expression in Human Erythroid Cells by Directly Modulating BCL11A
- (2013) Valentina Lulli et al. PLoS One
- miReader: Discovering Novel miRNAs in Species without Sequenced Genome
- (2013) Ashwani Jha et al. PLoS One
- RNA-CODE: A Noncoding RNA Classification Tool for Short Reads in NGS Data Lacking Reference Genomes
- (2013) Cheng Yuan et al. PLoS One
- Diagnostic Potential of Plasmatic MicroRNA Signatures in Stable and Unstable Angina
- (2013) Yuri D'Alessandra et al. PLoS One
- Dystromirs as Serum Biomarkers for Monitoring the Disease Severity in Duchenne Muscular Dystrophy
- (2013) Irina T. Zaharieva et al. PLoS One
- Mutant KRAS is a druggable target for pancreatic cancer
- (2013) E. Zorde Khvalevsky et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Dysregulation of the long non-coding RNA transcriptome in a Rett syndrome mouse model
- (2013) Paolo Petazzi et al. RNA Biology
- Quantitative Transcriptomics using Designed Primer-based Amplification
- (2013) Vipul Bhargava et al. Scientific Reports
- Pervasive Transcription of the Human Genome Produces Thousands of Previously Unidentified Long Intergenic Noncoding RNAs
- (2013) Matthew J. Hangauer et al. PLoS Genetics
- Circ2Traits: a comprehensive database for circular RNA potentially associated with disease and traits
- (2013) Suman Ghosal et al. Frontiers in Genetics
- hsa-miR-503 Is Downregulated in � Thalassemia Major
- (2012) Papai Roy et al. ACTA HAEMATOLOGICA
- Interactive exploration of RNA22 microRNA target predictions
- (2012) Phillipe Loher et al. BIOINFORMATICS
- SM2miR: a database of the experimentally validated small molecules' effects on microRNA expression
- (2012) X. Liu et al. BIOINFORMATICS
- An RNA Mapping DataBase for curating RNA structure mapping experiments
- (2012) Pablo Cordero et al. BIOINFORMATICS
- miR-EdiTar: a database of predicted A-to-I edited miRNA target sites
- (2012) Alessandro Laganà et al. BIOINFORMATICS
- ncPRO-seq: a tool for annotation and profiling of ncRNAs in sRNA-seq data
- (2012) Chong-Jian Chen et al. BIOINFORMATICS
- The UEA sRNA workbench: a suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets
- (2012) M. B. Stocks et al. BIOINFORMATICS
- Triplexator: Detecting nucleic acid triple helices in genomic and transcriptomic data
- (2012) F. A. Buske et al. GENOME RESEARCH
- The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
- (2012) T. Derrien et al. GENOME RESEARCH
- MicroRNA-205 regulates the expression of Parkinson's disease-related leucine-rich repeat kinase 2 protein
- (2012) Hyun Jin Cho et al. HUMAN MOLECULAR GENETICS
- MirPlex: A Tool for Identifying miRNAs in High-Throughput sRNA Datasets Without a Genome
- (2012) Daniel Mapleson et al. JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION
- Deep-Sequencing Analysis Reveals that the miR-199a2/214 Cluster within DNM3os Represents the Vast Majority of Aberrantly Expressed MicroRNAs in Sézary Syndrome
- (2012) Yongjun Qin et al. JOURNAL OF INVESTIGATIVE DERMATOLOGY
- Loss of miR-29 in Myoblasts Contributes to Dystrophic Muscle Pathogenesis
- (2012) Lijun Wang et al. MOLECULAR THERAPY
- Targeting nuclear RNA for in vivo correction of myotonic dystrophy
- (2012) Thurman M. Wheeler et al. NATURE
- Modular regulatory principles of large non-coding RNAs
- (2012) Mitchell Guttman et al. NATURE
- Landscape of transcription in human cells
- (2012) Sarah Djebali et al. NATURE
- Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells
- (2012) Daniel Ramsköld et al. NATURE BIOTECHNOLOGY
- LNCipedia: a database for annotated human lncRNA transcript sequences and structures
- (2012) Pieter-Jan Volders et al. NUCLEIC ACIDS RESEARCH
- YM500: a small RNA sequencing (smRNA-seq) database for microRNA research
- (2012) Wei-Chung Cheng et al. NUCLEIC ACIDS RESEARCH
- Circular RNAs Are the Predominant Transcript Isoform from Hundreds of Human Genes in Diverse Cell Types
- (2012) Julia Salzman et al. PLoS One
- MiR-101 and miR-144 Regulate the Expression of the CFTR Chloride Channel in the Lung
- (2012) Fatemat Hassan et al. PLoS One
- miRandola: Extracellular Circulating MicroRNAs Database
- (2012) Francesco Russo et al. PLoS One
- A microRNA network regulates expression and biosynthesis of wild-type and F508 mutant cystic fibrosis transmembrane conductance regulator
- (2012) S. Ramachandran et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Circular RNAs are abundant, conserved, and associated with ALU repeats
- (2012) W. R. Jeck et al. RNA
- A Pathogenic Mechanism in Huntington's Disease Involves Small CAG-Repeated RNAs with Neurotoxic Activity
- (2012) Mónica Bañez-Coronel et al. PLoS Genetics
- Long non-coding RNAs in cancer progression
- (2012) Keiko Tano et al. Frontiers in Genetics
- miRT: A Database of Validated Transcription Start Sites of Human MicroRNAs
- (2012) Malay Bhattacharyya et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- ViennaRNA Package 2.0
- (2011) Ronny Lorenz et al. Algorithms for Molecular Biology
- microRNA regulation of expression of the cystic fibrosis transmembrane conductance regulator gene
- (2011) Austin E. Gillen et al. BIOCHEMICAL JOURNAL
- Prediction of microRNA targets in Caenorhabditis elegans using a self-organizing map
- (2011) Liisa Heikkinen et al. BIOINFORMATICS
- Phase 2 randomized study of p53 antisense oligonucleotide (cenersen) plus idarubicin with or without cytarabine in refractory and relapsed acute myeloid leukemia
- (2011) Jorge Cortes et al. CANCER
- The Art of MicroRNA Research
- (2011) Eva van Rooij CIRCULATION RESEARCH
- miRNAs as serum biomarkers for Duchenne muscular dystrophy
- (2011) Davide Cacchiarelli et al. EMBO Molecular Medicine
- Disrupted microRNA expression caused by Mecp2 loss in a mouse model of Rett syndrome
- (2011) Rocio G. Urdinguio et al. Epigenetics
- Oxidative stress activation of miR-125b is part of the molecular switch for Hailey-Hailey disease manifestation
- (2011) Sonia Manca et al. EXPERIMENTAL DERMATOLOGY
- Novel representation of RNA secondary structure used to improve prediction algorithms
- (2011) Q. Zou et al. GENETICS AND MOLECULAR RESEARCH
- The research strategies for probing the function of long noncoding RNAs
- (2011) Biao Yan et al. GENOMICS
- Hsa-miR-34b is a plasma-stable microRNA that is elevated in pre-manifest Huntington's disease
- (2011) Philip Michael Gaughwin et al. HUMAN MOLECULAR GENETICS
- The Role of microRNAs in the Biology of Rare Diseases
- (2011) Marco Salvatore et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Diagnostic and prognostic impact of six circulating microRNAs in acute coronary syndrome
- (2011) Christian Widera et al. JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY
- Phase I/II Trial of Custirsen (OGX-011), an Inhibitor of Clusterin, in Combination with a Gemcitabine and Platinum Regimen in Patients with Previously Untreated Advanced Non-small Cell Lung Cancer
- (2011) Janessa J. Laskin et al. Journal of Thoracic Oncology
- MicroRNAs 103 and 107 regulate insulin sensitivity
- (2011) Mirko Trajkovski et al. NATURE
- lincRNAs act in the circuitry controlling pluripotency and differentiation
- (2011) Mitchell Guttman et al. NATURE
- Targeted RNA sequencing reveals the deep complexity of the human transcriptome
- (2011) Tim R Mercer et al. NATURE BIOTECHNOLOGY
- Long non-coding RNAs in Huntington's disease neurodegeneration
- (2011) Rory Johnson NEUROBIOLOGY OF DISEASE
- mirConnX: condition-specific mRNA-microRNA network integrator
- (2011) G. T. Huang et al. NUCLEIC ACIDS RESEARCH
- DARIO: a ncRNA detection and analysis tool for next-generation sequencing experiments
- (2011) Mario Fasold et al. NUCLEIC ACIDS RESEARCH
- miRanalyzer: an update on the detection and analysis of microRNAs in high-throughput sequencing experiments
- (2011) M. Hackenberg et al. NUCLEIC ACIDS RESEARCH
- NONCODE v3.0: integrative annotation of long noncoding RNAs
- (2011) D. Bu et al. NUCLEIC ACIDS RESEARCH
- psRNATarget: a plant small RNA target analysis server
- (2011) Xinbin Dai et al. NUCLEIC ACIDS RESEARCH
- Identification of Muscle-Specific MicroRNAs in Serum of Muscular Dystrophy Animal Models: Promising Novel Blood-Based Markers for Muscular Dystrophy
- (2011) Hideya Mizuno et al. PLoS One
- Regulation of miR-146a by RelA/NFkB and p53 in STHdhQ111/HdhQ111 Cells, a Cell Model of Huntington's Disease
- (2011) Jayeeta Ghose et al. PLoS One
- Cross-linking, ligation, and sequencing of hybrids reveals RNA-RNA interactions in yeast
- (2011) G. Kudla et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- MicroRNA profiling reveals that miR-21, miR486 and miR-214 are upregulated and involved in cell survival in Sézary syndrome
- (2011) M G Narducci et al. Cell Death & Disease
- Analysis of theMicro-RNA-133andPITX3genes in Parkinson's disease
- (2010) Lorena de Mena et al. AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS
- miR-29 Is a Major Regulator of Genes Associated with Pulmonary Fibrosis
- (2010) Leah Cushing et al. AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY
- MicroRNA expression in Sezary syndrome: identification, function, and diagnostic potential
- (2010) E. Ballabio et al. BLOOD
- dbDEMC: a database of differentially expressed miRNAs in human cancers
- (2010) Zhen Yang et al. BMC GENOMICS
- MicroRNA-328 Contributes to Adverse Electrical Remodeling in Atrial Fibrillation
- (2010) Yanjie Lu et al. CIRCULATION
- Circulating MicroRNAs in Patients With Coronary Artery Disease
- (2010) Stephan Fichtlscherer et al. CIRCULATION RESEARCH
- Circulating MicroRNA-208b and MicroRNA-499 Reflect Myocardial Damage in Cardiovascular Disease
- (2010) Maarten F. Corsten et al. Circulation-Cardiovascular Genetics
- MicroRNA profiling of multiple osteochondromas: identification of disease-specific and normal cartilage signatures
- (2010) M Zuntini et al. CLINICAL GENETICS
- A translational study of circulating cell-free microRNA-1 in acute myocardial infarction
- (2010) Yunhui Cheng et al. CLINICAL SCIENCE
- Overexpression of microRNA-206 in the skeletal muscle from myotonic dystrophy type 1 patients
- (2010) Stefano Gambardella et al. Journal of Translational Medicine
- Inosine cyanoethylation identifies A-to-I RNA editing sites in the human transcriptome
- (2010) Masayuki Sakurai et al. Nature Chemical Biology
- 17A, a novel non-coding RNA, regulates GABA B alternative splicing and signaling in response to inflammatory stimuli and in Alzheimer disease
- (2010) Sara Massone et al. NEUROBIOLOGY OF DISEASE
- miRGator v2.0 : an integrated system for functional investigation of microRNAs
- (2010) S. Cho et al. NUCLEIC ACIDS RESEARCH
- mirTools: microRNA profiling and discovery based on high-throughput sequencing
- (2010) Erle Zhu et al. NUCLEIC ACIDS RESEARCH
- MAGIA, a web-based tool for miRNA and Genes Integrated Analysis
- (2010) G. Sales et al. NUCLEIC ACIDS RESEARCH
- MapSplice: Accurate mapping of RNA-seq reads for splice junction discovery
- (2010) Kai Wang et al. NUCLEIC ACIDS RESEARCH
- Human accelerated region 1 noncoding RNA is repressed by REST in Huntington's disease
- (2010) Rory Johnson et al. PHYSIOLOGICAL GENOMICS
- ExprTarget: An Integrative Approach to Predicting Human MicroRNA Targets
- (2010) Eric R. Gamazon et al. PLoS One
- The Origins of the RNA World
- (2010) M. P. Robertson et al. Cold Spring Harbor Perspectives in Biology
- TargetMiner: microRNA target prediction with systematic identification of tissue-specific negative examples
- (2009) Sanghamitra Bandyopadhyay et al. BIOINFORMATICS
- mimiRNA: a microRNA expression profiler and classification resource designed to identify functional correlations between microRNAs and their targets
- (2009) William Ritchie et al. BIOINFORMATICS
- Infernal 1.0: inference of RNA alignments
- (2009) E. P. Nawrocki et al. BIOINFORMATICS
- HHMMiR: efficient de novo prediction of microRNAs using hierarchical hidden Markov models
- (2009) Sabah Kadri et al. BMC BIOINFORMATICS
- MicroPC (μPC): A comprehensive resource for predicting and comparing plant microRNAs
- (2009) Wuttichai Mhuantong et al. BMC GENOMICS
- Downregulation of miR-133 and miR-590 contributes to nicotine-induced atrial remodelling in canines
- (2009) Hongli Shan et al. CARDIOVASCULAR RESEARCH
- Origins and Mechanisms of miRNAs and siRNAs
- (2009) Richard W. Carthew et al. CELL
- Common micro-RNA signature in skeletal muscle damage and regeneration induced by Duchenne muscular dystrophy and acute ischemia
- (2009) Simona Greco et al. FASEB JOURNAL
- Long noncoding RNAs: functional surprises from the RNA world
- (2009) J. E. Wilusz et al. GENES & DEVELOPMENT
- Cold-induced silencing by long antisense transcripts of an Arabidopsis Polycomb target
- (2009) Szymon Swiezewski et al. NATURE
- Long non-coding RNAs: insights into functions
- (2009) Tim R. Mercer et al. NATURE REVIEWS GENETICS
- Biogenesis of small RNAs in animals
- (2009) V. Narry Kim et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- SeqBuster, a bioinformatic tool for the processing and analysis of small RNAs datasets, reveals ubiquitous miRNA modifications in human embryonic cells
- (2009) Lorena Pantano et al. NUCLEIC ACIDS RESEARCH
- MirZ: an integrated microRNA expression atlas and target prediction resource
- (2009) J. Hausser et al. NUCLEIC ACIDS RESEARCH
- MicroRNA and mRNA integrated analysis (MMIA): a web tool for examining biological functions of microRNA expression
- (2009) Seungyoon Nam et al. NUCLEIC ACIDS RESEARCH
- Evidence for X-Chromosomal Schizophrenia Associated with microRNA Alterations
- (2009) Jinong Feng et al. PLoS One
- MicroRNA-92a Controls Angiogenesis and Functional Recovery of Ischemic Tissues in Mice
- (2009) A. Bonauer et al. SCIENCE
- MicroRNA-206 Delays ALS Progression and Promotes Regeneration of Neuromuscular Synapses in Mice
- (2009) A. H. Williams et al. SCIENCE
- Fast Mapping of Short Sequences with Mismatches, Insertions and Deletions Using Index Structures
- (2009) Steve Hoffmann et al. PLoS Computational Biology
- CID-miRNA: A web server for prediction of novel miRNA precursors in human genome
- (2008) Sonika Tyagi et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- MicroRNA prediction with a novel ranking algorithm based on random walks
- (2008) Y. Xu et al. BIOINFORMATICS
- MicroRNA-206 Is Highly Expressed in Newly Formed Muscle Fibers: Implications Regarding Potential for Muscle Regeneration and Maturation in Muscular Dystrophy
- (2008) Katsutoshi Yuasa et al. CELL STRUCTURE AND FUNCTION
- A ncRNA Modulates Histone Modification and mRNA Induction in the Yeast GAL Gene Cluster
- (2008) Jonathan Houseley et al. MOLECULAR CELL
- RNA-Seq: a revolutionary tool for transcriptomics
- (2008) Zhong Wang et al. NATURE REVIEWS GENETICS
- The Vienna RNA Websuite
- (2008) A. R. Gruber et al. NUCLEIC ACIDS RESEARCH
- miRecords: an integrated resource for microRNA-target interactions
- (2008) F. Xiao et al. NUCLEIC ACIDS RESEARCH
- miR2Disease: a manually curated database for microRNA deregulation in human disease
- (2008) Q. Jiang et al. NUCLEIC ACIDS RESEARCH
- Dysregulation of microRNAs after myocardial infarction reveals a role of miR-29 in cardiac fibrosis
- (2008) E. van Rooij et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Regulation of neural macroRNAs by the transcriptional repressor REST
- (2008) R. Johnson et al. RNA
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now