lncRNAdb v2.0: expanding the reference database for functional long noncoding RNAs
Published 2014 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
lncRNAdb v2.0: expanding the reference database for functional long noncoding RNAs
Authors
Keywords
-
Journal
NUCLEIC ACIDS RESEARCH
Volume 43, Issue D1, Pages D168-D173
Publisher
Oxford University Press (OUP)
Online
2014-10-21
DOI
10.1093/nar/gku988
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- lnCeDB: Database of Human Long Noncoding RNA Acting as Competing Endogenous RNA
- (2014) Shaoli Das et al. PLoS One
- A meta-analysis of the genomic and transcriptomic composition of complex life
- (2013) Gangiang Liu et al. CELL CYCLE
- Structure and function of long noncoding RNAs in epigenetic regulation
- (2013) Tim R Mercer et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein–RNA interaction networks from large-scale CLIP-Seq data
- (2013) Jun-Hao Li et al. NUCLEIC ACIDS RESEARCH
- Widespread purifying selection on RNA structure in mammals
- (2013) Martin A. Smith et al. NUCLEIC ACIDS RESEARCH
- NONCODEv4: exploring the world of long non-coding RNA genes
- (2013) Chaoyong Xie et al. NUCLEIC ACIDS RESEARCH
- The Xist lncRNA Exploits Three-Dimensional Genome Architecture to Spread Across the X Chromosome
- (2013) J. M. Engreitz et al. SCIENCE
- Pinstripe: a suite of programs for integrating transcriptomic and proteomic datasets identifies novel proteins and improves differentiation of protein-coding and non-coding genes
- (2012) Dennis K. Gascoigne et al. BIOINFORMATICS
- Long noncoding RNAs are rarely translated in two human cell lines
- (2012) B. Banfai et al. GENOME RESEARCH
- The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
- (2012) T. Derrien et al. GENOME RESEARCH
- GENCODE: The reference human genome annotation for The ENCODE Project
- (2012) J. Harrow et al. GENOME RESEARCH
- Noncanonical microRNAs and endogenous siRNAs in normal and psoriatic human skin
- (2012) Jing Xia et al. HUMAN MOLECULAR GENETICS
- Landscape of transcription in human cells
- (2012) Sarah Djebali et al. NATURE
- Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
- (2012) Cole Trapnell et al. Nature Protocols
- ChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIP-Seq data
- (2012) Jian-Hua Yang et al. NUCLEIC ACIDS RESEARCH
- DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs
- (2012) Maria D. Paraskevopoulou et al. NUCLEIC ACIDS RESEARCH
- The evolution of RNAs with multiple functions
- (2011) Marcel E. Dinger et al. BIOCHIMIE
- A ceRNA Hypothesis: The Rosetta Stone of a Hidden RNA Language?
- (2011) Leonardo Salmena et al. CELL
- Ribosome Profiling of Mouse Embryonic Stem Cells Reveals the Complexity and Dynamics of Mammalian Proteomes
- (2011) Nicholas T. Ingolia et al. CELL
- Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
- (2011) M. N. Cabili et al. GENES & DEVELOPMENT
- Molecular Mechanisms of Long Noncoding RNAs
- (2011) Kevin C. Wang et al. MOLECULAR CELL
- Targeted RNA sequencing reveals the deep complexity of the human transcriptome
- (2011) Tim R Mercer et al. NATURE BIOTECHNOLOGY
- NONCODE v3.0: integrative annotation of long noncoding RNAs
- (2011) D. Bu et al. NUCLEIC ACIDS RESEARCH
- RNAcentral: A vision for an international database of RNA sequences
- (2011) A. Bateman et al. RNA
- SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer
- (2011) M. E. Askarian-Amiri et al. RNA
- Widespread transcription at neuronal activity-regulated enhancers
- (2010) Tae-Kyung Kim et al. NATURE
- lncRNAdb: a reference database for long noncoding RNAs
- (2010) Paulo P. Amaral et al. NUCLEIC ACIDS RESEARCH
- Most “Dark Matter” Transcripts Are Associated With Known Genes
- (2010) Harm van Bakel et al. PLOS BIOLOGY
- Paraspeckles: nuclear bodies built on long noncoding RNA
- (2009) Charles S. Bond et al. JOURNAL OF CELL BIOLOGY
- Long non-coding RNAs: insights into functions
- (2009) Tim R. Mercer et al. NATURE REVIEWS GENETICS
- Specific expression of long noncoding RNAs in the mouse brain
- (2008) T. R. Mercer et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Eukaryotic Genome as an RNA Machine
- (2008) P. P. Amaral et al. SCIENCE
- Differentiating Protein-Coding and Noncoding RNA: Challenges and Ambiguities
- (2008) Marcel E. Dinger et al. PLoS Computational Biology
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now