Fungal evolution: cellular, genomic and metabolic complexity

Comparative genomics of Rhizophagus irregularis , R. cerebriforme , R. diaphanus and Gigaspora rosea highlights specific genetic features in Glomeromycotina

(2019) Emmanuelle Morin et al.   NEW PHYTOLOGIST

Transcriptomic atlas of mushroom development reveals conserved genes behind complex multicellularity in fungi

(2019) Krisztina Krizsán et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chromosome rearrangements shape the diversification of secondary metabolism in the cyclosporin producing fungus Tolypocladium inflatum

(2019) Rodrigo A. Olarte et al.   BMC GENOMICS

Horizontal gene transfer as an indispensable driver for Neocallimastigomycota evolution into a distinct gut-dwelling fungal lineage

(2019) Chelsea L. Murphy et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Horizontal gene transfer allowed the emergence of broad host range entomopathogens

(2019) Qiangqiang Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolutionary and functional patterns of shared gene neighbourhood in fungi

(2019) Marina Marcet-Houben et al.   Nature Microbiology

Fungal evolution: diversity, taxonomy and phylogeny of the Fungi

(2019) Miguel A. Naranjo‐Ortiz et al.   BIOLOGICAL REVIEWS

Psychoactive plant- and mushroom-associated alkaloids from two behavior modifying cicada pathogens

(2019) Greg R. Boyce et al.   Fungal Ecology

Interspecific Gene Exchange as a Driver of Adaptive Evolution in Fungi

(2018) Alice Feurtey et al.   Annual Review of Microbiology

The Oxylipin Pathways: Biochemistry and Function

(2018) Claus Wasternack et al.   Annual Review of Plant Biology

Complex multicellularity in fungi: evolutionary convergence, single origin, or both?

(2018) László G. Nagy et al.   BIOLOGICAL REVIEWS

Pangenome analyses of the wheat pathogen Zymoseptoria tritici reveal the structural basis of a highly plastic eukaryotic genome

(2018) Clémence Plissonneau et al.   BMC BIOLOGY

Widespread signatures of selection for secreted peptidases in a fungal plant pathogen

(2018) Parvathy Krishnan et al.   BMC EVOLUTIONARY BIOLOGY

Genomic evidence for intraspecific hybridization in a clonal and extremely halotolerant yeast

(2018) Cene Gostinčar et al.   BMC GENOMICS

Armillaria

(2018) György Sipos et al.   CURRENT BIOLOGY

Patterns of Conservation and Diversification in the Fungal Polarization Network

(2018) Eveline T Diepeveen et al.   Genome Biology and Evolution

Protein Activity of the Fusarium fujikuroi Rhodopsins CarO and OpsA and Their Relation to Fungus–Plant Interaction

(2018) Alexander Adam et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Fungal Morphogenesis, from the Polarized Growth of Hyphae to Complex Reproduction and Infection Structures

(2018) Meritxell Riquelme et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Adaptation of S. cerevisiae to Fermented Food Environments Reveals Remarkable Genome Plasticity and the Footprints of Domestication

(2018) Jean-Luc Legras et al.   MOLECULAR BIOLOGY AND EVOLUTION

Arbuscular mycorrhizal fungi: intraspecific diversity and pangenomes

(2018) Stephanie Mathieu et al.   NEW PHYTOLOGIST

High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis

(2018) Eric C. H. Chen et al.   NEW PHYTOLOGIST

Population genomics of Fusarium graminearum reveals signatures of divergent evolution within a major cereal pathogen

(2018) Amy C. Kelly et al.   PLoS One

Whole genome comparison of Aspergillus flavus L-morphotype strain NRRL 3357 (type) and S-morphotype strain AF70

(2018) Matthew K. Gilbert et al.   PLoS One

Multiple large-scale gene and genome duplications during the evolution of hexapods

(2018) Zheng Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Chytrid-like Parasites of Algae Amoeboradix gromovi gen. et sp. nov. and Sanchytrium tribonematis Belong to a New Fungal Lineage

(2018) Sergey A. Karpov et al.   PROTIST

Mitonuclear interactions may contribute to fitness of fungal hybrids

(2018) Luana Giordano et al.   Scientific Reports

On spiking behaviour of oyster fungi Pleurotus djamor

(2018) Andrew Adamatzky   Scientific Reports

Evolutionary novelty in gravity sensing through horizontal gene transfer and high-order protein assembly

(2018) Tu Anh Nguyen et al.   PLOS BIOLOGY

Distinct Roles of Velvet Complex in the Development, Stress Tolerance, and Secondary Metabolism in Pestalotiopsis microspora, a Taxol Producer

(2018) Oren Akhberdi et al.   Genes

Influences of environmental factors on fruiting body induction, development and maturation in mushroom-forming fungi

(2018) Yuichi Sakamoto   Fungal Biology Reviews

Genomics and transcriptomics to study fruiting body development: An update

(2018) Minou Nowrousian   Fungal Biology Reviews

Pan-Parastagonospora Comparative Genome Analysis—Effector Prediction and Genome Evolution

(2018) Robert A Syme et al.   Genome Biology and Evolution

Comparative analysis of five Mucor species transcriptomes

(2018) Lebreton Annie et al.   GENOMICS

Genome evolution across 1,011 Saccharomyces cerevisiae isolates

(2018) Jackson Peter et al.   NATURE

The birth, evolution and death of metabolic gene clusters in fungi

(2018) Antonis Rokas et al.   NATURE REVIEWS MICROBIOLOGY

Harman and norharman, metabolites of entomopathogenic fungus Conidiobolus coronatus (Entomopthorales), disorganize development of Galleria mellonella (Lepidoptera) and affect serotonin-regulating enzymes

(2018) Anna Katarzyna Wrońska et al.   PLoS One

Brettanomyces bruxellensis population survey reveals a diploid-triploid complex structured according to substrate of isolation and geographical distribution

(2018) Marta Avramova et al.   Scientific Reports

Characterisation of pathogen-specific regions and novel effector candidates in Fusarium oxysporum f. sp. cepae

(2018) Andrew D. Armitage et al.   Scientific Reports

How fungi defend themselves against microbial competitors and animal predators

(2018) Markus Künzler   PLoS Pathogens

Evolutionary Emergence of Drug Resistance in Candida Opportunistic Pathogens

(2018) Ewa Ksiezopolska et al.   Genes

Complex fungi

(2018) Ursula Kües et al.   Fungal Biology Reviews

Trichoderma atroviride from Predator to Prey: Role of the Mitogen-Activated Protein Kinase Tmk3 in Fungal Chemical Defense against Fungivory by Drosophila melanogaster Larvae

(2018) Karina Atriztán-Hernández et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Fungal secondary metabolism: regulation, function and drug discovery

(2018) Nancy P. Keller   NATURE REVIEWS MICROBIOLOGY

Functional and evolutionary characterization of a secondary metabolite gene cluster in budding yeasts

(2018) David J. Krause et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Danger signals activate a putative innate immune system during regeneration in a filamentous fungus

(2018) Elizabeth Medina-Castellanos et al.   PLoS Genetics

First steps towards mitochondrial pan-genomics: detailed analysis of Fusarium graminearum mitogenomes

(2018) Balázs Brankovics et al.   PeerJ

Leveraging single-cell genomics to expand the fungal tree of life

(2018) Steven R. Ahrendt et al.   Nature Microbiology

Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle

(2018) Claude Murat et al.   Nature Ecology & Evolution

Woronin body-based sealing of septal pores

(2017) Gero Steinberg et al.   FUNGAL GENETICS AND BIOLOGY

How light affects the life of Botrytis

(2017) Julia Schumacher   FUNGAL GENETICS AND BIOLOGY

CRISPR system in filamentous fungi: Current achievements and future directions

(2017) Huaxiang Deng et al.   GENE

Genome Diversity and Evolution in the Budding Yeasts (Saccharomycotina)

(2017) Bernard A. Dujon et al.   GENETICS

Environmental Escherichia coli : ecology and public health implications-a review

(2017) J. Jang et al.   JOURNAL OF APPLIED MICROBIOLOGY

Molecular Phylogeny and Ultrastructure of Aphelidium desmodesmi , a New Species in Aphelida (Opisthosporidia)

(2017) Peter M. Letcher et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

A chromosome 4 trisomy contributes to increased fluconazole resistance in a clinical isolate of Candida albicans

(2017) Matthew Z. Anderson et al.   MICROBIOLOGY-SGM

The Influence of Polyploidy on the Evolution of Yeast Grown in a Sub-Optimal Carbon Source

(2017) Amber L. Scott et al.   MOLECULAR BIOLOGY AND EVOLUTION

Mechanism of nuclear movements in a multinucleated cell

(2017) Romain Gibeaux et al.   MOLECULAR BIOLOGY OF THE CELL

Light sensing by opsins and fungal ecology: NOP-1 modulates entry into sexual reproduction in response to environmental cues

(2017) Zheng Wang et al.   MOLECULAR ECOLOGY

Structural character evolution in Pucciniomycotina: mitosis, septa, and hyphal branch initiation in two Helicogloea species

(2017) David J. McLaughlin et al.   MYCOLOGIA

Yeasts in Pucciniomycotina

(2017) Franz Oberwinkler   MYCOLOGICAL PROGRESS

Widespread adenine N6-methylation of active genes in fungi

(2017) Stephen J Mondo et al.   NATURE GENETICS

Evolution and genome architecture in fungal plant pathogens

(2017) Mareike Möller et al.   NATURE REVIEWS MICROBIOLOGY

Functional horizontal gene transfer from bacteria to eukaryotes

(2017) Filip Husnik et al.   NATURE REVIEWS MICROBIOLOGY

Fertile Prototaxites taiti : a basal ascomycete with inoperculate, polysporous asci lacking croziers

(2017) Rosmarie Honegger et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A Global Coexpression Network Approach for Connecting Genes to Specialized Metabolic Pathways in Plants

(2017) Jennifer H. Wisecaver et al.   PLANT CELL

Exploring the genomic diversity of black yeasts and relatives ( Chaetothyriales , Ascomycota )

(2017) M.M. Teixeira et al.   STUDIES IN MYCOLOGY

Hybridization and emergence of virulence in opportunistic human yeast pathogens

(2017) Verónica Mixão et al.   YEAST

Innovation and constraint leading to complex multicellularity in the Ascomycota

(2017) Tu Anh Nguyen et al.   Nature Communications

Sequencing genomes from mixed DNA samples - evaluating the metagenome skimming approach in lichenized fungi

(2017) Anjuli Meiser et al.   Scientific Reports

Functional distinction of hyphal compartments

(2017) Martin Tegelaar et al.   Scientific Reports

Genomic Data Quality Impacts Automated Detection of Lateral Gene Transfer in Fungi

(2017) Pierre-Yves Dupont et al.   G3-Genes Genomes Genetics

Insight into the Recent Genome Duplication of the Halophilic Yeast Hortaea werneckii : Combining an Improved Genome with Gene Expression and Chromatin Structure

(2017) Sunita Sinha et al.   G3-Genes Genomes Genetics

The ancestral levels of transcription and the evolution of sexual phenotypes in filamentous fungi

(2017) Frances Trail et al.   PLoS Genetics

Genome Diversity and Evolution in the Budding Yeasts (Saccharomycotina)

(2017) Bernard A. Dujon et al.   GENETICS

Global analysis of biosynthetic gene clusters reveals vast potential of secondary metabolite production in Penicillium species

(2017) Jens Christian Nielsen et al.   Nature Microbiology

Genome expansion and lineage-specific genetic innovations in the forest pathogenic fungi Armillaria

(2017) György Sipos et al.   Nature Ecology & Evolution

Early diverging lineages within Cryptomycota and Chytridiomycota dominate the fungal communities in ice-covered lakes of the McMurdo Dry Valleys, Antarctica

(2017) Keilor Rojas-Jimenez et al.   Scientific Reports

The Case of the Missing Ancient Fungal Polyploids

(2016) Matthew A. Campbell et al.   AMERICAN NATURALIST

Coordinated process of polarized growth in filamentous fungi

(2016) Norio Takeshita   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Domestication and Divergence of Saccharomyces cerevisiae Beer Yeasts

(2016) Brigida Gallone et al.   CELL

Expansion of Signal Transduction Pathways in Fungi by Extensive Genome Duplication

(2016) Luis M. Corrochano et al.   CURRENT BIOLOGY

Interspecific hybridization impacts host range and pathogenicity of filamentous microbes

(2016) Jasper RL Depotter et al.   CURRENT OPINION IN MICROBIOLOGY

Exchange of core chromosomes and horizontal transfer of lineage-specific chromosomes in Fusarium oxysporum

(2016) Ido Vlaardingerbroek et al.   ENVIRONMENTAL MICROBIOLOGY

Horizontal acquisition of toxic alkaloid synthesis in a clade of plant associated fungi

(2016) Marina Marcet-Houben et al.   FUNGAL GENETICS AND BIOLOGY

Chromosome-Specific and Global Effects of Aneuploidy in Saccharomyces cerevisiae

(2016) S. E. Dodgson et al.   GENETICS

Phylogenetic Resolution of Deep Eukaryotic and Fungal Relationships Using Highly Conserved Low-Copy Nuclear Genes

(2016) Ren Ren et al.   Genome Biology and Evolution

Global deceleration of gene evolution following recent genome hybridizations in fungi

(2016) Sira Sriswasdi et al.   GENOME RESEARCH

LaeA and VeA are involved in growth morphology, asexual development, and mycotoxin production in Alternaria alternata

(2016) N. Estiarte et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Population genomics reveals that within-fungus polymorphism is common and maintained in populations of the mycorrhizal fungus Rhizophagus irregularis

(2016) Tania Wyss et al.   ISME Journal

Key role of LaeA and velvet complex proteins on expression of β-lactam and PR-toxin genes in Penicillium chrysogenum: cross-talk regulation of secondary metabolite pathways

(2016) Juan F. Martín   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Production of cross-kingdom oxylipins by pathogenic fungi: An update on their role in development and pathogenicity

(2016) Gregory J. Fischer et al.   JOURNAL OF MICROBIOLOGY

Dynamic Evolution of Nitric Oxide Detoxifying Flavohemoglobins, a Family of Single-Protein Metabolic Modules in Bacteria and Eukaryotes

(2016) Jennifer H. Wisecaver et al.   MOLECULAR BIOLOGY AND EVOLUTION

Clustered nuclei maintain autonomy and nucleocytoplasmic ratio control in a syncytium

(2016) Samantha E. R. Dundon et al.   MOLECULAR BIOLOGY OF THE CELL

New insights from an old mutant: SPADIX4 governs fruiting body development but not hyphal fusion in Sordaria macrospora

(2016) Ines Teichert et al.   MOLECULAR GENETICS AND GENOMICS

Hyphal tip cytoplasmic organization in four zygomycetous fungi

(2016) Karen E. Fisher et al.   MYCOLOGIA

A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data

(2016) Joseph W. Spatafora et al.   MYCOLOGIA

Plant metabolic clusters - from genetics to genomics

(2016) Hans-Wilhelm Nützmann et al.   NEW PHYTOLOGIST

The Role of Hybridization in the Evolution and Emergence of New Fungal Plant Pathogens

(2016) Eva H. Stukenbrock   PHYTOPATHOLOGY

Basidiomycete yeasts in the cortex of ascomycete macrolichens

(2016) Toby Spribille et al.   SCIENCE

Signal exchange and integration during self-fusion in filamentous fungi

(2016) André Fleißner et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

The good, the bad and the tasty: The many roles of mushrooms

(2016) K.M.J. de Mattos-Shipley et al.   STUDIES IN MYCOLOGY

Transfer of DNA from Bacteria to Eukaryotes

(2016) Benoît Lacroix et al.   mBio

The Evolution of Orphan Regions in Genomes of a Fungal Pathogen of Wheat

(2016) Clémence Plissonneau et al.   mBio

The pangenome of an agronomically important crop plant Brassica oleracea

(2016) Agnieszka A. Golicz et al.   Nature Communications

Whole Genome Analysis of 132 Clinical Saccharomyces cerevisiae Strains Reveals Extensive Ploidy Variation

(2016) Yuan O. Zhu et al.   G3-Genes Genomes Genetics

The Adenylate-Forming Enzymes AfeA and TmpB Are Involved in Aspergillus nidulans Self-Communication during Asexual Development

(2016) Gabriela Soid-Raggi et al.   Frontiers in Microbiology

A Survey of the Gene Repertoire of Gigaspora rosea Unravels Conserved Features among Glomeromycota for Obligate Biotrophy

(2016) Nianwu Tang et al.   Frontiers in Microbiology

Evolutionary pressures on microbial metabolic strategies in the chemostat

(2016) Meike T. Wortel et al.   Scientific Reports

Evolutionary formation of gene clusters by reorganization: the meleagrin/roquefortine paradigm in different fungi

(2015) Juan F. Martín et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Genome mining of ascomycetous fungi reveals their genetic potential for ergot alkaloid production

(2015) Nina Gerhards et al.   ARCHIVES OF MICROBIOLOGY

Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus

(2015) Michael H Perlin et al.   BMC GENOMICS

Adaptive Horizontal Gene Transfers between Multiple Cheese-Associated Fungi

(2015) Jeanne Ropars et al.   CURRENT BIOLOGY

Damage response involves mechanisms conserved across plants, animals and fungi

(2015) M. A. Hernández-Oñate et al.   CURRENT GENETICS

Polyploidy and genome evolution in plants

(2015) Pamela S Soltis et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

The two-speed genomes of filamentous pathogens: waltz with plants

(2015) Suomeng Dong et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Cell fusion in Neurospora crassa

(2015) Stephanie Herzog et al.   CURRENT OPINION IN MICROBIOLOGY

Nuclear autonomy in multinucleate fungi

(2015) Samantha E Roberts et al.   CURRENT OPINION IN MICROBIOLOGY

Life as a moving fluid: fate of cytoplasmic macromolecules in dynamic fungal syncytia

(2015) Marcus Roper et al.   CURRENT OPINION IN MICROBIOLOGY

Shift and adapt: the costs and benefits of karyotype variations

(2015) Aleeza C Gerstein et al.   CURRENT OPINION IN MICROBIOLOGY

Phylogenomics and evolution of secondary metabolism in plant-associated fungi

(2015) Joseph W Spatafora et al.   CURRENT OPINION IN PLANT BIOLOGY

Genome analyses suggest the presence of polyploidy and recent human-driven expansions in eight global populations of the honeybee pathogenNosema ceranae

(2015) Adrian Pelin et al.   ENVIRONMENTAL MICROBIOLOGY

Aneuploid proliferation defects in yeast are not driven by copy number changes of a few dosage-sensitive genes

(2015) Megan E. Bonney et al.   GENES & DEVELOPMENT

Parasexual Ploidy Reduction Drives Population Heterogeneity Through Random and Transient Aneuploidy in Candida albicans

(2015) Meleah A. Hickman et al.   GENETICS

Genome Sequencing of Multiple Isolates Highlights Subtelomeric Genomic Diversity withinFusarium fujikuroi

(2015) Matteo Chiara et al.   Genome Biology and Evolution

Contrasting Genomic Diversity in Two Closely Related Postharvest Pathogens:Penicillium digitatumandPenicillium expansum

(2015) Irene Julca et al.   Genome Biology and Evolution

Studying Genome Heterogeneity within the Arbuscular Mycorrhizal Fungal Cytoplasm

(2015) Eva Boon et al.   Genome Biology and Evolution

Genome-Wide Analysis of Adaptive Molecular Evolution in the Carnivorous Plant Utricularia gibba

(2015) Lorenzo Carretero-Paulet et al.   Genome Biology and Evolution

The 100-genomes strains, anS. cerevisiaeresource that illuminates its natural phenotypic and genotypic variation and emergence as an opportunistic pathogen

(2015) Pooja K. Strope et al.   GENOME RESEARCH

Ancestral whole-genome duplication in the marine chelicerate horseshoe crabs

(2015) N J Kenny et al.   HEREDITY

The expanding implications of polyploidy

(2015) Kevin P. Schoenfelder et al.   JOURNAL OF CELL BIOLOGY

dipSPAdes: Assembler for Highly Polymorphic Diploid Genomes

(2015) Yana Safonova et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Whole genome duplications in plants: an overview fromArabidopsis

(2015) Juan Carlos del Pozo et al.   JOURNAL OF EXPERIMENTAL BOTANY

A “Developmental Hourglass” in Fungi

(2015) Xuanjin Cheng et al.   MOLECULAR BIOLOGY AND EVOLUTION

Evolutionary Advantage Conferred by an Eukaryote-to-Eukaryote Gene Transfer Event in Wine Yeasts

(2015) Souhir Marsit et al.   MOLECULAR BIOLOGY AND EVOLUTION

Ploidy variation in multinucleate cells changes under stress

(2015) Cori A. Anderson et al.   MOLECULAR BIOLOGY OF THE CELL

The VELVET Complex in the Gray Mold Fungus Botrytis cinerea: Impact of BcLAE1 on Differentiation, Secondary Metabolism, and Virulence

(2015) Julia Schumacher et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Cytology and molecular phylogenetics of Monoblepharidomycetes provide evidence for multiple independent origins of the hyphal habit in the Fungi

(2015) Jaclyn M. Dee et al.   MYCOLOGIA

Translating biosynthetic gene clusters into fungal armor and weaponry

(2015) Nancy P Keller   Nature Chemical Biology

Horizontal gene transfer: building the web of life

(2015) Shannon M. Soucy et al.   NATURE REVIEWS GENETICS

Homokaryotic vs heterokaryotic mycelium in arbuscular mycorrhizal fungi: different techniques, different results?

(2015) Jeanne Ropars et al.   NEW PHYTOLOGIST

Genome-scale phylogenetic analysis finds extensive gene transfer among fungi

(2015) Gergely J. Szöllősi et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Towards plant pangenomics

(2015) Agnieszka A. Golicz et al.   PLANT BIOTECHNOLOGY JOURNAL

Horizontal DNA transfer from bacteria to eukaryotes and a lesson from experimental transfers

(2015) Katsunori Suzuki et al.   RESEARCH IN MICROBIOLOGY

The rhodopsin–guanylyl cyclase of the aquatic fungusBlastocladiella emersoniienables fast optical control of cGMP signaling

(2015) Ulrike Scheib et al.   Science Signaling

Phylogenetic classification of yeasts and related taxa within Pucciniomycotina

(2015) Q.-M. Wang et al.   STUDIES IN MYCOLOGY

Multigene phylogeny and taxonomic revision of yeasts and related fungi in the Ustilaginomycotina

(2015) Q.-M. Wang et al.   STUDIES IN MYCOLOGY

Black Queen evolution: the role of leakiness in structuring microbial communities

(2015) J. Jeffrey Morris   TRENDS IN GENETICS

Polyploid Titan Cells Produce Haploid and Aneuploid Progeny To Promote Stress Adaptation

(2015) Aleeza C. Gerstein et al.   mBio

The CarO rhodopsin of the fungus Fusarium fujikuroi is a light-driven proton pump that retards spore germination

(2015) Jorge García-Martínez et al.   Scientific Reports

Beyond the Whole-Genome Duplication: Phylogenetic Evidence for an Ancient Interspecies Hybridization in the Baker's Yeast Lineage

(2015) Marina Marcet-Houben et al.   PLOS BIOLOGY

The Genomic Aftermath of Hybridization in the Opportunistic Pathogen Candida metapsilosis

(2015) Leszek P. Pryszcz et al.   PLoS Genetics

Rapidly Evolving Genes Are Key Players in Host Specialization and Virulence of the Fungal Wheat Pathogen Zymoseptoria tritici (Mycosphaerella graminicola)

(2015) Stephan Poppe et al.   PLoS Pathogens

Dimensions of Horizontal Gene Transfer in Eukaryotic Microbial Pathogens

(2015) Emile Gluck-Thaler et al.   PLoS Pathogens

HGT-Finder: A New Tool for Horizontal Gene Transfer Finding and Application to Aspergillus genomes

(2015) Marcus Nguyen et al.   Toxins

Cellular compartmentalization of secondary metabolism

(2015) H. Corby Kistler et al.   Frontiers in Microbiology

Fungal natural products—the mushroom perspective

(2015) Marc Stadler et al.   Frontiers in Microbiology

Fungal metabolic gene clusters—caravans traveling across genomes and environments

(2015) Jennifer H. Wisecaver et al.   Frontiers in Microbiology

Parasexual Ploidy Reduction Drives Population Heterogeneity Through Random and Transient Aneuploidy in Candida albicans

(2015) Meleah A. Hickman et al.   GENETICS

The rhodopsin–guanylyl cyclase of the aquatic fungusBlastocladiella emersoniienables fast optical control of cGMP signaling

(2015) Ulrike Scheib et al.   Science Signaling

How do Agaricomycetes shape their fruiting bodies? 1. Morphological aspects of development

(2015) Ursula Kües et al.   Fungal Biology Reviews

A CRISPR-Cas9 System for Genetic Engineering of Filamentous Fungi

(2015) Christina S. Nødvig et al.   PLoS One

Horizontal Gene Transfer in Eukaryotic Plant Pathogens

(2014) Darren Soanes et al.   Annual Review of Phytopathology

Manipulation of fungal development as source of novel secondary metabolites for biotechnology

(2014) Jennifer Gerke et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The scope for nuclear selection within Termitomyces fungi associated with fungus-growing termites is limited

(2014) Tania Nobre et al.   BMC EVOLUTIONARY BIOLOGY

Comparative transcriptomics of the model mushroom Coprinopsis cinerea reveals tissue-specific armories and a conserved circuitry for sexual development

(2014) David Plaza et al.   BMC GENOMICS

Fungal photobiology: visible light as a signal for stress, space and time

(2014) Kevin K. Fuller et al.   CURRENT GENETICS

The Spitzenkörper: a choreographer of fungal growth and morphogenesis

(2014) Meritxell Riquelme et al.   CURRENT OPINION IN MICROBIOLOGY

Coordinated and Distinct Functions of Velvet Proteins in Fusarium verticillioides

(2014) Nan Lan et al.   EUKARYOTIC CELL

Ecological and evolutionary implications of hyphal anastomosis in arbuscular mycorrhizal fungi

(2014) Pierre-Luc Chagnon   FEMS MICROBIOLOGY ECOLOGY

Adaptation ofCandida albicansto growth on sorbose via monosomy of chromosome 5 accompanied by duplication of another chromosome carrying a gene responsible for sorbose utilization

(2014) Anatoliy Kravets et al.   FEMS YEAST RESEARCH

Widespread horizontal transfer of the cerato-ulmin gene between Ophiostoma novo-ulmi and Geosmithia species

(2014) Priscilla P. Bettini et al.   Fungal Biology

Distribution and evolution of het gene homologs in the basidiomycota

(2014) M.A. Van der Nest et al.   FUNGAL GENETICS AND BIOLOGY

New Insights Into the Roles of NADPH Oxidases in Sexual Development and Ascospore Germination in Sordaria macrospora

(2014) D. E. Dirschnabel et al.   GENETICS

Vegetative Incompatibility Loci with Dedicated Roles in Allorecognition Restrict Mycovirus Transmission in Chestnut Blight Fungus

(2014) Dong-Xiu Zhang et al.   GENETICS

Phylogenomic Study Indicates Widespread Lateral Gene Transfer in Entamoeba and Suggests a Past Intimate Relationship with Parabasalids

(2014) Jessica R. Grant et al.   Genome Biology and Evolution

Genome Comparison of Candida orthopsilosis Clinical Strains Reveals the Existence of Hybrids between Two Distinct Subspecies

(2014) Leszek P. Pryszcz et al.   Genome Biology and Evolution

Genetic and phenotypic intra-species variation inCandida albicans

(2014) Matthew P. Hirakawa et al.   GENOME RESEARCH

Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads

(2014) Rei Kajitani et al.   GENOME RESEARCH

Time to flower: interplay between photoperiod and the circadian clock

(2014) Mikael Johansson et al.   JOURNAL OF EXPERIMENTAL BOTANY

An eight-gene molecular phylogeny of the Kickxellomycotina, including the first phylogenetic placement of Asellariales

(2014) Eric D. Tretter et al.   MYCOLOGIA

Sex in the Mucoralean Fungi

(2014) Soo Chan Lee et al.   MYCOSES

Traversing the fungal terpenome

(2014) Maureen B. Quin et al.   NATURAL PRODUCT REPORTS

Ionic Nature of Burn-Induced Variation Potential in Wheat Leaves

(2014) Lyubov Katicheva et al.   PLANT AND CELL PHYSIOLOGY

Nitrogen and Carbon Reallocation in Fungal Mycelia during Decomposition of Boreal Forest Litter

(2014) Johanna B. Boberg et al.   PLoS One

Molecular Phylogeny and Ultrastructure of Aphelidium aff. melosirae (Aphelida, Opisthosporidia)

(2014) Sergey A. Karpov et al.   PROTIST

The rise of operon-like gene clusters in plants

(2014) Svetlana Boycheva et al.   TRENDS IN PLANT SCIENCE

Rapid Mechanisms for Generating Genome Diversity: Whole Ploidy Shifts, Aneuploidy, and Loss of Heterozygosity

(2014) R. J. Bennett et al.   Cold Spring Harbor Perspectives in Medicine

Genome Sequence of Saccharomyces carlsbergensis , the World’s First Pure Culture Lager Yeast

(2014) Andrea Walther et al.   G3-Genes Genomes Genetics

A Tetraploid Intermediate Precedes Aneuploid Formation in Yeasts Exposed to Fluconazole

(2014) Benjamin D. Harrison et al.   PLOS BIOLOGY

HAM-5 Functions As a MAP Kinase Scaffold during Cell Fusion in Neurospora crassa

(2014) Wilfried Jonkers et al.   PLoS Genetics

Insights into the Dekkera bruxellensis Genomic Landscape: Comparative Genomics Reveals Variations in Ploidy and Nutrient Utilisation Potential amongst Wine Isolates

(2014) Anthony R. Borneman et al.   PLoS Genetics

The Evolution of Fungal Metabolic Pathways

(2014) Jennifer H. Wisecaver et al.   PLoS Genetics

Morphology, phylogeny, and ecology of the aphelids (Aphelidea, Opisthokonta) and proposal for the new superphylum Opisthosporidia

(2014) Sergey A. Karpov et al.   Frontiers in Microbiology

Extracellular ATP activates MAPK and ROS signaling during injury response in the fungus Trichoderma atroviride

(2014) Elizabeth Medina-Castellanos et al.   Frontiers in Plant Science

The evolutionary-developmental origins of multicellularity

(2013) K. J. Niklas   AMERICAN JOURNAL OF BOTANY

Tip Growth in Filamentous Fungi: A Road Trip to the Apex

(2013) Meritxell Riquelme   Annual Review of Microbiology

Biology, Epidemiology, and Control ofHeterobasidionSpecies Worldwide

(2013) Matteo Garbelotto et al.   Annual Review of Phytopathology

Molecular tools for functional genomics in filamentous fungi: Recent advances and new strategies

(2013) Dewei Jiang et al.   BIOTECHNOLOGY ADVANCES

High-throughput genome sequencing of lichenizing fungi to assess gene loss in the ammonium transporter/ammonia permease gene family

(2013) Tami R McDonald et al.   BMC GENOMICS

Comprehensive annotation of secondary metabolite biosynthetic genes and gene clusters of Aspergillus nidulans, A. fumigatus, A. niger and A. oryzae

(2013) Diane O Inglis et al.   BMC MICROBIOLOGY

Chitin, Chitosan, and Glycated Chitosan Regulate Immune Responses: The Novel Adjuvants for Cancer Vaccine

(2013) Xiaosong Li et al.   Clinical & Developmental Immunology

Nuclear Repulsion Enables Division Autonomy in a Single Cytoplasm

(2013) Cori A. Anderson et al.   CURRENT BIOLOGY

Discovery of a Sexual Cycle in Aspergillus lentulus, a Close Relative of A. fumigatus

(2013) Sameira S. Swilaiman et al.   EUKARYOTIC CELL

Rapid genotypic change and plasticity in arbuscular mycorrhizal fungi is caused by a host shift and enhanced by segregation

(2013) Caroline Angelard et al.   ISME Journal

Stress adaptation in a pathogenic fungus

(2013) A. J. P. Brown et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Gene duplication as a major force in evolution

(2013) SANTOSHKUMAR MAGADUM et al.   JOURNAL OF GENETICS

The impact of automated filtering of BLAST-determined homologs in the phylogenetic detection of horizontal gene transfer from a transcriptome assembly

(2013) Jennifer H. Wisecaver et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Functional and phylogenetic implications of septal pore ultrastructure in the ascoma of Neolecta vitellina

(2013) Rosanne A. Healy et al.   MYCOLOGIA

Combined molecular and morphological data for improving phylogenetic hypothesis in Dacrymycetes

(2013) Takashi Shirouzu et al.   MYCOLOGIA

Evolution of fungal sexual reproduction

(2013) Joseph Heitman et al.   MYCOLOGIA

Examining new phylogenetic markers to uncover the evolutionary history of early-diverging fungi: comparing MCM7, TSR1 and rRNA genes for single- and multi-gene analyses of the Kickxellomycotina

(2013) E.D. Tretter et al.   PERSOONIA

Gravitropism inPhycomyces: violation of the so-called resultant law - evidence for two response components

(2013) M. Göttig et al.   PLANT BIOLOGY

Dating the Diversification of the Major Lineages of Ascomycota (Fungi)

(2013) María Prieto et al.   PLoS One

Trans-Kingdom Horizontal DNA Transfer from Bacteria to Yeast Is Highly Plastic Due to Natural Polymorphisms in Auxiliary Nonessential Recipient Genes

(2013) Kazuki Moriguchi et al.   PLoS One

Induced Fungal Resistance to Insect Grazing: Reciprocal Fitness Consequences and Fungal Gene Expression in the Drosophila-Aspergillus Model System

(2013) Silvia Caballero Ortiz et al.   PLoS One

Whole Genome Duplication and Enrichment of Metal Cation Transporters Revealed by De Novo Genome Sequencing of Extremely Halotolerant Black Yeast Hortaea werneckii

(2013) Metka Lenassi et al.   PLoS One

Characterization of Chromosome Stability in Diploid, Polyploid and Hybrid Yeast Cells

(2013) Rajaraman Kumaran et al.   PLoS One

Physical linkage of metabolic genes in fungi is an adaptation against the accumulation of toxic intermediate compounds

(2013) K. L. McGary et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Complex history of the amphibian-killing chytrid fungus revealed with genome resequencing data

(2013) Erica Bree Rosenblum et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nuclear dynamics in a fungal chimera

(2013) M. Roper et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fungal metabolic plasticity and sexual development mediate induced resistance to arthropod fungivory

(2013) K. Doll et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Ploidy variation as an adaptive mechanism in human pathogenic fungi

(2013) Carl A. Morrow et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Saccharomyces diversity and evolution: a budding model genus

(2013) Chris Todd Hittinger   TRENDS IN GENETICS

Light Sensing in Aspergillus fumigatus Highlights the Case for Establishing New Models for Fungal Photobiology

(2013) A. Idnurm   mBio

The new modern era of yeast genomics: community sequencing and the resulting annotation of multiple Saccharomyces cerevisiae strains at the Saccharomyces Genome Database

(2013) Stacia R. Engel et al.   Database-The Journal of Biological Databases and Curation

Chromosomal Copy Number Variation, Selection and Uneven Rates of Recombination Reveal Cryptic Genome Diversity Linked to Pathogenicity

(2013) Rhys A. Farrer et al.   PLoS Genetics

Insights to fungal biology through LaeA sleuthing

(2013) Sachin Jain et al.   Fungal Biology Reviews

Regulation of transcription by light in Neurospora crassa: A model for fungal photobiology?

(2013) María Olmedo et al.   Fungal Biology Reviews

Development of thallus axes in Usnea longissima (Parmeliaceae, Ascomycota), a fruticose lichen showing diffuse growth

(2012) W. B. Sanders et al.   AMERICAN JOURNAL OF BOTANY

The chromatin code of fungal secondary metabolite gene clusters

(2012) Agnieszka Gacek et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Apoptosis-like programmed cell death in the grey mould fungusBotrytis cinerea: genes and their role in pathogenicity

(2012) Neta Shlezinger et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Tropical fungal diversity: closing the gap between species estimates and species discovery

(2012) M. Catherine Aime et al.   BIODIVERSITY AND CONSERVATION

Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus

(2012) Marina Marcet-Houben et al.   BMC GENOMICS

Physiological Significance of Network Organization in Fungi

(2012) Anna Simonin et al.   EUKARYOTIC CELL

Peroxisomal and Mitochondrial β-Oxidation Pathways Influence the Virulence of the Pathogenic Fungus Cryptococcus neoformans

(2012) Matthias Kretschmer et al.   EUKARYOTIC CELL

Titan Cells Confer Protection from Phagocytosis in Cryptococcus neoformans Infections

(2012) Laura H. Okagaki et al.   EUKARYOTIC CELL

When aspergillosis hits the fan: Disease transmission and fungal biomass in diseased versus healthy sea fans (Gorgonia ventalina)

(2012) Carlos Toledo-Hernández et al.   Fungal Ecology

Aneuploidy causes proteotoxic stress in yeast

(2012) A. B. Oromendia et al.   GENES & DEVELOPMENT

Two Separate Gene Clusters Encode the Biosynthetic Pathway for the Meroterpenoids Austinol and Dehydroaustinol in Aspergillus nidulans

(2012) Hsien-Chun Lo et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

De novo sequencing, assembly and analysis of the genome of the laboratory strain Saccharomyces cerevisiae CEN.PK113-7D, a model for modern industrial biotechnology

(2012) Jurgen F Nijkamp et al.   Microbial Cell Factories

Evolutionary Role of Interspecies Hybridization and Genetic Exchanges in Yeasts

(2012) Lucia Morales et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Multiple modes for gatekeeping at fungal cell-to-cell channels

(2012) Gregory Jedd et al.   MOLECULAR MICROBIOLOGY

An Aspergillus nidulans bZIP response pathway hardwired for defensive secondary metabolism operates through aflR

(2012) Wen-Bing Yin et al.   MOLECULAR MICROBIOLOGY

The velvet complex governs mycotoxin production and virulence ofFusarium oxysporumon plant and mammalian hosts

(2012) Manuel S. López-Berges et al.   MOLECULAR MICROBIOLOGY

Hyphal heterogeneity inAspergillus oryzaeis the result of dynamic closure of septa by Woronin bodies

(2012) Robert-Jan Bleichrodt et al.   MOLECULAR MICROBIOLOGY

Explorations of catalytic domains in non-ribosomal peptide synthetase enzymology

(2012) Gene H. Hur et al.   NATURAL PRODUCT REPORTS

Emerging fungal threats to animal, plant and ecosystem health

(2012) Matthew C. Fisher et al.   NATURE

The genetic basis of flowering responses to seasonal cues

(2012) Fernando Andrés et al.   NATURE REVIEWS GENETICS

Regulation of fungal secondary metabolism

(2012) Axel A. Brakhage   NATURE REVIEWS MICROBIOLOGY

Ecological and genetic factors linked to contrasting genome dynamics in seed plants

(2012) A. R. Leitch et al.   NEW PHYTOLOGIST

Hybridization of Neotyphodium endophytes enhances competitive ability of the host grass

(2012) S. Saari et al.   NEW PHYTOLOGIST

Surface tip-to-base Ca2+ and H+ ionic fluxes are involved in apical growth and graviperception of the Phycomyces stage I sporangiophore

(2012) Branka D. Živanović   PLANTA

Heterokaryon Incompatibility Is Suppressed Following Conidial Anastomosis Tube Fusion in a Fungal Plant Pathogen

(2012) Francine H. Ishikawa et al.   PLoS One

The Sfp-Type 4′-Phosphopantetheinyl Transferase Ppt1 of Fusarium fujikuroi Controls Development, Secondary Metabolism and Pathogenicity

(2012) Philipp Wiemann et al.   PLoS One

An injury-response mechanism conserved across kingdoms determines entry of the fungus Trichoderma atroviride into development

(2012) M. A. Hernandez-Onate et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fusion of two divergent fungal individuals led to the recent emergence of a unique widespread pathogen species

(2012) E. H. Stukenbrock et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Polyploidy in fungi: evolution after whole-genome duplication

(2012) W. Albertin et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Trichothecene toxicity in eukaryotes: Cellular and molecular mechanisms in plants and animals

(2012) Chanemougasoundharam Arunachalam et al.   TOXICOLOGY LETTERS

Genetic Diversity and Genomic Plasticity of Cryptococcus neoformans AD Hybrid Strains

(2012) Wenjun Li et al.   G3-Genes Genomes Genetics

Apoptotic-like programed cell death in fungi: the benefits in filamentous species

(2012) Neta Shlezinger et al.   Frontiers in Oncology

The Fungi: 1, 2, 3 … 5.1 million species?

(2011) Meredith Blackwell   AMERICAN JOURNAL OF BOTANY

Invasive Mycoses: Diagnostic Challenges

(2011) Luis Ostrosky-Zeichner   AMERICAN JOURNAL OF MEDICINE

Sex in Fungi

(2011) Min Ni et al.   Annual Review of Genetics

Somatic Hybridization in the Uredinales

(2011) Robert F. Park et al.   Annual Review of Phytopathology

A multigene phylogeny of Olpidium and its implications for early fungal evolution

(2011) Satoshi Sekimoto et al.   BMC EVOLUTIONARY BIOLOGY

Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: a highly specialized approach to carbohydrate degradation depicted at genome level

(2011) Evy Battaglia et al.   BMC GENOMICS

Nuclear and Genome Dynamics in Multinucleate Ascomycete Fungi

(2011) Marcus Roper et al.   CURRENT BIOLOGY

Whole-Genome Sequencing of Sake Yeast Saccharomyces cerevisiae Kyokai no. 7

(2011) T. Akao et al.   DNA RESEARCH

Identification and Characterization of Genes Required for Cell-to-Cell Fusion in Neurospora crassa

(2011) Ci Fu et al.   EUKARYOTIC CELL

Oxylipins in fungi

(2011) Florian Brodhun et al.   FEBS Journal

Horizontal gene transfer in fungi

(2011) David A. Fitzpatrick   FEMS MICROBIOLOGY LETTERS

Form follows function – The versatile fungal cytoskeleton

(2011) Alexander Lichius et al.   Fungal Biology

Architecture and development of the Neurospora crassa hypha – a model cell for polarized growth

(2011) Meritxell Riquelme et al.   Fungal Biology

The hyphal tip structure of Basidiobolus sp.: A zygomycete fungus of uncertain phylogeny

(2011) Robert W. Roberson et al.   Fungal Biology

Evaluating Phylogenetic Congruence in the Post-Genomic Era

(2011) Jessica W. Leigh et al.   Genome Biology and Evolution

The making of a new pathogen: Insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species

(2011) E. H. Stukenbrock et al.   GENOME RESEARCH

Transcriptional regulatory elements in fungal secondary metabolism

(2011) Wenbing Yin et al.   JOURNAL OF MICROBIOLOGY

A Consistent Phylogenetic Backbone for the Fungi

(2011) I. Ebersberger et al.   MOLECULAR BIOLOGY AND EVOLUTION

Cdc42/Rho GTPases in fungi: variations on a common theme

(2011) Steven D. Harris   MOLECULAR MICROBIOLOGY

Phylogeny and character evolution in the jelly fungi (Tremellomycetes, Basidiomycota, Fungi)

(2011) Ana M. Millanes et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Identification of Novel Hybrids Between Cryptococcus neoformans var. grubii VNI and Cryptococcus gattii VGII

(2011) Mojgan Aminnejad et al.   MYCOPATHOLOGIA

Heterozygosis and Pathogenicity of Cryptococcus neoformans AD-Hybrid Isolates

(2011) M. Cogliati et al.   MYCOPATHOLOGIA

Discovery of novel intermediate forms redefines the fungal tree of life

(2011) Meredith D. M. Jones et al.   NATURE

Ancestral polyploidy in seed plants and angiosperms

(2011) Yuannian Jiao et al.   NATURE

How does a hypha grow? The biophysics of pressurized growth in fungi

(2011) Roger R. Lew   NATURE REVIEWS MICROBIOLOGY

Polarized growth in fungi: Symmetry breaking and hyphal formation

(2011) Robert A. Arkowitz et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Whole-Genome Comparison Reveals Novel Genetic Elements That Characterize the Genome of Industrial Strains of Saccharomyces cerevisiae

(2011) Anthony R. Borneman et al.   PLoS Genetics

Genomic Transition to Pathogenicity in Chytrid Fungi

(2011) Suzanne Joneson et al.   PLoS Pathogens

Tipping the Balance: Sclerotinia sclerotiorum Secreted Oxalic Acid Suppresses Host Defenses by Manipulating the Host Redox Environment

(2011) Brett Williams et al.   PLoS Pathogens

Gene transfer into the fungi

(2011) Thomas A. Richards et al.   Fungal Biology Reviews

Sex in Penicillium series Roqueforti

(2011) Jos Houbraken et al.   IMA Fungus

Multinucleate Spores Contribute to Evolutionary Longevity of Asexual Glomeromycota

(2010) Jean‐Luc Jany et al.   AMERICAN NATURALIST

Horizontal Transfer of a Large and Highly Toxic Secondary Metabolic Gene Cluster between Fungi

(2010) Jason C. Slot et al.   CURRENT BIOLOGY

Basidiomycete Mating Type Genes and Pheromone Signaling

(2010) Marjatta Raudaskoski et al.   EUKARYOTIC CELL

Sordaria macrospora, a model organism to study fungal cellular development

(2010) Ines Engh et al.   EUROPEAN JOURNAL OF CELL BIOLOGY

Regulation of fruiting body photomorphogenesis in Coprinopsis cinerea

(2010) Takashi Kamada et al.   FUNGAL GENETICS AND BIOLOGY

Photobiology in the Zygomycota: Multiple photoreceptor genes for complex responses to light

(2010) Luis M. Corrochano et al.   FUNGAL GENETICS AND BIOLOGY

Compartmentalization and molecular traffic in secondary metabolism: A new understanding of established cellular processes

(2010) Ludmila V. Roze et al.   FUNGAL GENETICS AND BIOLOGY

The lipid language of plant–fungal interactions

(2010) Shawn A. Christensen et al.   FUNGAL GENETICS AND BIOLOGY

Perithecium morphogenesis in Sordaria macrospora

(2010) Kathryn M. Lord et al.   FUNGAL GENETICS AND BIOLOGY

Fungal secondary metabolites – Strategies to activate silent gene clusters

(2010) Axel A. Brakhage et al.   FUNGAL GENETICS AND BIOLOGY

Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control

(2010) D. E. Neafsey et al.   GENOME RESEARCH

The Evolution of Sex: a Perspective from the Fungal Kingdom

(2010) S. C. Lee et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

The ham-5, rcm-1 and rco-1 genes regulate hyphal fusion in Neurospora crassa

(2010) M. S. Aldabbous et al.   MICROBIOLOGY-SGM

FSY1, a horizontally transferred gene in the Saccharomyces cerevisiae EC1118 wine yeast strain, encodes a high-affinity fructose/H+ symporter

(2010) V. Galeote et al.   MICROBIOLOGY-SGM

The diversity and evolution of circadian clock proteins in fungi

(2010) Leonidas Salichos et al.   MYCOLOGIA

Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis

(2010) Francis Martin et al.   NATURE

Genome sequence of the model mushroom Schizophyllum commune

(2010) Robin A Ohm et al.   NATURE BIOTECHNOLOGY

Yeast evolutionary genomics

(2010) Bernard Dujon   NATURE REVIEWS GENETICS

Evolution and Diversity of a Fungal Self/Nonself Recognition Locus

(2010) Charles Hall et al.   PLoS One

Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)

(2010) J. E. Stajich et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Selection of Variovorax paradoxus-like bacteria in the mycosphere and the role of fungal-released compounds

(2010) F.G.H. Boersma et al.   SOIL BIOLOGY & BIOCHEMISTRY

An efficient gene deletion procedure for the mushroom-forming basidiomycete Schizophyllum commune

(2010) Robin A. Ohm et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

LaeA Control of Velvet Family Regulatory Proteins for Light-Dependent Development and Fungal Cell-Type Specificity

(2010) Özlem Sarikaya Bayram et al.   PLoS Genetics

Cryptococcus neoformans Overcomes Stress of Azole Drugs by Formation of Disomy in Specific Multiple Chromosomes

(2010) Edward Sionov et al.   PLoS Pathogens

Gene Transfer and Diversification of Microbial Eukaryotes

(2009) Jan O. Andersson   Annual Review of Microbiology

AoSO protein accumulates at the septal pore in response to various stresses in the filamentous fungus Aspergillus oryzae

(2009) Jun-ichi Maruyama et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

The role of sex in fungal evolution

(2009) Clifford Zeyl   CURRENT OPINION IN MICROBIOLOGY

Horizontal Chromosome Transfer, a Mechanism for the Evolution and Differentiation of a Plant-Pathogenic Fungus

(2009) Yasunori Akagi et al.   EUKARYOTIC CELL

Complex Nature of the Genome in a Wine Spoilage Yeast,Dekkera bruxellensis

(2009) Linda Hellborg et al.   EUKARYOTIC CELL

Mechanisms that promote bacterial fitness in fungal-affected soil microhabitats

(2009) Rashid Nazir et al.   FEMS MICROBIOLOGY ECOLOGY

Chitosan permeabilizes the plasma membrane and kills cells of Neurospora crassa in an energy dependent manner

(2009) J. Palma-Guerrero et al.   FUNGAL GENETICS AND BIOLOGY

Working outside the protein-synthesis rules: insights into non-ribosomal peptide synthesis

(2009) Mohamed A. Marahiel   JOURNAL OF PEPTIDE SCIENCE

Distribution of Hybrid Fungal Symbionts and Environmental Stress

(2009) Cyd E. Hamilton et al.   MICROBIAL ECOLOGY

Epigenome manipulation as a pathway to new natural product scaffolds and their congeners

(2009) Robert H. Cichewicz   NATURAL PRODUCT REPORTS

Diversity, regulation, and evolution of the gibberellin biosynthetic pathway in fungi compared to plants and bacteria

(2009) Christiane Bömke et al.   PHYTOCHEMISTRY

Ancient Horizontal Gene Transfer from Bacteria Enhances Biosynthetic Capabilities of Fungi

(2009) Imke Schmitt et al.   PLoS One

Eukaryote-to-eukaryote gene transfer events revealed by the genome sequence of the wine yeast Saccharomyces cerevisiae EC1118

(2009) M. Novo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A key role for vesicles in fungal secondary metabolism

(2009) A. Chanda et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Biosynthesis of oxylipins in non-mammals

(2009) Alexandra Andreou et al.   PROGRESS IN LIPID RESEARCH

The Environmental Clade LKM11 and Rozella Form the Deepest Branching Clade of Fungi

(2009) Enrique Lara et al.   PROTIST

The Ascomycota Tree of Life: A Phylum-wide Phylogeny Clarifies the Origin and Evolution of Fundamental Reproductive and Ecological Traits

(2009) Conrad L. Schoch et al.   SYSTEMATIC BIOLOGY

Acquisition of prokaryotic genes by fungal genomes

(2009) Marina Marcet-Houben et al.   TRENDS IN GENETICS

Regulation and compartmentalization of β-lactam biosynthesis

(2009) Juan F. Martín et al.   Microbial Biotechnology

Trikaryon formation and nuclear selection in pairings between heterokaryons and homokaryons of the root rot pathogen Heterobasidion parviporum

(2009) Timothy Y. James et al.  

Septal pore complex morphology in the Agaricomycotina (Basidiomycota) with emphasis on the Cantharellales and Hymenochaetales

(2009) Kenneth G.A. van Driel et al.  

Maize Inbreds Exhibit High Levels of Copy Number Variation (CNV) and Presence/Absence Variation (PAV) in Genome Content

(2009) Nathan M. Springer et al.   PLoS Genetics

The Genome of Nectria haematococca: Contribution of Supernumerary Chromosomes to Gene Expansion

(2009) Jeffrey J. Coleman et al.   PLoS Genetics

Hyphal morphogenesis in Aspergillus nidulans

(2009) William R. Rittenour et al.   Fungal Biology Reviews

The social evolution of somatic fusion

(2008) Duur K. Aanen et al.   BIOESSAYS

EVOLUTIONARY SIGNIFICANCE OF IMBALANCED NUCLEAR RATIOS WITHIN HETEROKARYONS OF THE BASIDIOMYCETE FUNGUSHETEROBASIDION PARVIPORUM

(2008) Timothy Y. James et al.   EVOLUTION

Aneuploidy: Cells Losing Their Balance

(2008) Eduardo M. Torres et al.   GENETICS

Selection of bacterial populations in the mycosphere of Laccaria proxima: is type III secretion involved?

(2008) Jan Aaldrik Warmink et al.   ISME Journal

Imaging complex nutrient dynamics in mycelial networks

(2008) M.D. FRICKER et al.   JOURNAL OF MICROSCOPY

Recent Fungal Diseases of Crop Plants: Is Lateral Gene Transfer a Common Theme?

(2008) Richard P. Oliver et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Branching of fungal hyphae: regulation, mechanisms and comparison with other branching systems

(2008) Steven D. Harris   MYCOLOGIA

Discovery of a sexual cycle in the opportunistic fungal pathogen Aspergillus fumigatus

(2008) Céline M. O’Gorman et al.   NATURE

Turning a hobby into a job: How duplicated genes find new functions

(2008) Gavin C. Conant et al.   NATURE REVIEWS GENETICS

Dealing with incongruence in phylogenomic analyses

(2008) N. Galtier et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Oxylipins: Structurally diverse metabolites from fatty acid oxidation

(2008) Alina Mosblech et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

The evolution of gene collectives: How natural selection drives chemical innovation

(2008) M. A. Fischbach et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Apoptosis pathways in fungal growth, development and ageing

(2008) Andrea Hamann et al.   TRENDS IN MICROBIOLOGY

The Parasexual Cycle in Candida albicans Provides an Alternative Pathway to Meiosis for the Formation of Recombinant Strains

(2008) Anja Forche et al.   PLOS BIOLOGY

Evidence for horizontal transfer of a secondary metabolite gene cluster between fungi

(2008) Nora Khaldi et al.   GENOME BIOLOGY

Metabolic diversity of lichen-forming ascomycetous fungi: culturing, polyketide and shikimatemetabolite production, and PKS genes

(2007) Elfie Stocker-Wörgötter   NATURAL PRODUCT REPORTS

Gene surfing in expanding populations

(2007) Oskar Hallatschek et al.   THEORETICAL POPULATION BIOLOGY