Chromosomal Copy Number Variation, Selection and Uneven Rates of Recombination Reveal Cryptic Genome Diversity Linked to Pathogenicity

Complex history of the amphibian-killing chytrid fungus revealed with genome resequencing data

(2013) Erica Bree Rosenblum et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Using False Discovery Rates to Benchmark SNP-callers in next-generation sequencing projects

(2013) Rhys A. Farrer et al.   Scientific Reports

Extending Coalescent Theory to Autotetraploids

(2012) B. Arnold et al.   GENETICS

Hybrid advantage in skin peptide immune defenses of water frogs (Pelophylax esculentus) at risk from emerging pathogens

(2012) Janine M. Daum et al.   INFECTION GENETICS AND EVOLUTION

Novel, panzootic and hybrid genotypes of amphibian chytridiomycosis associated with the bullfrog trade

(2012) LISA M. SCHLOEGEL et al.   MOLECULAR ECOLOGY

Emerging fungal threats to animal, plant and ecosystem health

(2012) Matthew C. Fisher et al.   NATURE

Substrate-Specific Gene Expression in Batrachochytrium dendrobatidis, the Chytrid Pathogen of Amphibians

(2012) Erica Bree Rosenblum et al.   PLoS One

Species-Specific Chitin-Binding Module 18 Expansion in the Amphibian Pathogen Batrachochytrium dendrobatidis

(2012) J. Abramyan et al.   mBio

Genome Analyses of an Aggressive and Invasive Lineage of the Irish Potato Famine Pathogen

(2012) David E. L. Cooke et al.   PLoS Pathogens

Aneuploidy and Drug Resistance in Pathogenic Fungi

(2012) Kyung J. Kwon-Chung et al.   PLoS Pathogens

Evidence for acquisition of virulence effectors in pathogenic chytrids

(2011) Guiling Sun et al.   BMC EVOLUTIONARY BIOLOGY

Variation in chromosome copy number influences the virulence of Cryptococcus neoformans and occurs in isolates from AIDS patients

(2011) Guanggan Hu et al.   BMC GENOMICS

Multiple emergences of genetically diverse amphibian-infecting chytrids include a globalized hypervirulent recombinant lineage

(2011) R. A. Farrer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Aneuploidy Drives Genomic Instability in Yeast

(2011) J. M. Sheltzer et al.   SCIENCE

High-Resolution SNP/CGH Microarrays Reveal the Accumulation of Loss of Heterozygosity in Commonly Used Candida albicans Strains

(2011) Darren Abbey et al.   G3-Genes Genomes Genetics

Genomic Transition to Pathogenicity in Chytrid Fungi

(2011) Suzanne Joneson et al.   PLoS Pathogens

Evolution of Eukaryotic Microbial Pathogens via Covert Sexual Reproduction

(2010) Joseph Heitman   Cell Host & Microbe

Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium

(2010) Li-Jun Ma et al.   NATURE

Cryptococcus neoformans Overcomes Stress of Azole Drugs by Formation of Disomy in Specific Multiple Chromosomes

(2010) Edward Sionov et al.   PLoS Pathogens

Global Emergence ofBatrachochytrium dendrobatidisand Amphibian Chytridiomycosis in Space, Time, and Host

(2009) Matthew C. Fisher et al.   Annual Review of Microbiology

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Mechanistic Plasticity of Sexual Reproduction and Meiosis in the Candida Pathogenic Species Complex

(2009) Jennifer L. Reedy et al.   CURRENT BIOLOGY

Evolution in Candida albicans Populations During a Single Passage Through a Mouse Host

(2009) A. Forche et al.   GENETICS

Amphibian chytridiomycosis in Japan: distribution, haplotypes and possible route of entry into Japan

(2009) KOICHI GOKA et al.   MOLECULAR ECOLOGY

MEROPS: the peptidase database

(2009) Neil D. Rawlings et al.   NUCLEIC ACIDS RESEARCH

Meiosis Drives Extraordinary Genome Plasticity in the Haploid Fungal Plant Pathogen Mycosphaerella graminicola

(2009) Alexander H. J. Wittenberg et al.   PLoS One

Rapid Global Expansion of the Fungal Disease Chytridiomycosis into Declining and Healthy Amphibian Populations

(2009) Timothy Y. James et al.   PLoS Pathogens

LIFE-HISTORY TRADE-OFFS INFLUENCE DISEASE IN CHANGING CLIMATES: STRATEGIES OF AN AMPHIBIAN PATHOGEN

(2008) Douglas C. Woodhams et al.   ECOLOGY

The Parasexual Cycle in Candida albicans Provides an Alternative Pathway to Meiosis for the Formation of Recombinant Strains

(2008) Anja Forche et al.   PLOS BIOLOGY