Microbiome-based interventions to modulate gut ecology and the immune system
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Title
Microbiome-based interventions to modulate gut ecology and the immune system
Authors
Keywords
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Journal
Mucosal Immunology
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2022-09-30
DOI
10.1038/s41385-022-00564-1
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Note: Only part of the references are listed.- Exploring the role of gut microbiota in host feeding behavior among breeds in swine
- (2022) Yuqing He et al. BMC MICROBIOLOGY
- Bifidobacterium longum subsp. infantis EVC001 Administration Is Associated with a Significant Reduction in the Incidence of Necrotizing Enterocolitis in Very Low Birth Weight Infants
- (2022) Joseph Tobias et al. JOURNAL OF PEDIATRICS
- Multi-omics analyses of the ulcerative colitis gut microbiome link Bacteroides vulgatus proteases with disease severity
- (2022) Robert H. Mills et al. Nature Microbiology
- Anaerobic single‐cell dispensing facilitates the cultivation of human gut bacteria
- (2022) Afrizal Afrizal et al. ENVIRONMENTAL MICROBIOLOGY
- Immune regulation by fungal strain diversity in inflammatory bowel disease
- (2022) Xin V. Li et al. NATURE
- Human gut bacteria produce ΤΗ17-modulating bile acid metabolites
- (2022) Donggi Paik et al. NATURE
- Cross-cohort gut microbiome associations with immune checkpoint inhibitor response in advanced melanoma
- (2022) Karla A. Lee et al. NATURE MEDICINE
- Gut microbiota and fermentation-derived branched chain hydroxy acids mediate health benefits of yogurt consumption in obese mice
- (2022) Noëmie Daniel et al. Nature Communications
- A single-cell nanocoating of probiotics for enhanced amelioration of antibiotic-associated diarrhea
- (2022) Jiezhou Pan et al. Nature Communications
- Analysis of colonic mucosa-associated microbiota using endoscopically collected lavage
- (2022) Eiji Miyauchi et al. Scientific Reports
- Metagenomic strain detection with SameStr: identification of a persisting core gut microbiota transferable by fecal transplantation
- (2022) Daniel Podlesny et al. Microbiome
- Targeted suppression of human IBD-associated gut microbiota commensals by phage consortia for treatment of intestinal inflammation
- (2022) Sara Federici et al. CELL
- Rethinking healthy eating in light of the gut microbiome
- (2022) Anissa M. Armet et al. Cell Host & Microbe
- Maternal gut microbiota Bifidobacterium promotes placental morphogenesis, nutrient transport and fetal growth in mice
- (2022) Jorge Lopez-Tello et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Helminth-induced reprogramming of the stem cell compartment inhibits type 2 immunity
- (2022) Danielle Karo-Atar et al. JOURNAL OF EXPERIMENTAL MEDICINE
- Within-host evolution of a gut pathobiont facilitates liver translocation
- (2022) Yi Yang et al. NATURE
- The microbiome and gut homeostasis
- (2022) Jee-Yon Lee et al. SCIENCE
- Effects of Dietary Fibers on Short-Chain Fatty Acids and Gut Microbiota Composition in Healthy Adults: A Systematic Review
- (2022) Valentina Vinelli et al. Nutrients
- A taxonomic note on the genus Prevotella: Description of four novel genera and emended description of the genera Hallella and Xylanibacter
- (2022) Thomas C.A. Hitch et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- The International Scientific Association for Probiotics and Prebiotics (ISAPP) consensus statement on fermented foods
- (2021) Maria L. Marco et al. Nature Reviews Gastroenterology & Hepatology
- Anomalous collapses of Nares Strait ice arches leads to enhanced export of Arctic sea ice
- (2021) G. W. K. Moore et al. Nature Communications
- Lessons learned from the prenatal microbiome controversy
- (2021) Martin J. Blaser et al. Microbiome
- A philosophical perspective on the prenatal in utero microbiome debate
- (2021) Jens Walter et al. Microbiome
- Association of Maternal Microbiota and Diet in Cord Blood Cytokine and Immunoglobulin Profiles
- (2021) Karla Rio-Aige et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Fecal microbiota transplant overcomes resistance to anti–PD-1 therapy in melanoma patients
- (2021) Diwakar Davar et al. SCIENCE
- Elevated rates of horizontal gene transfer in the industrialized human microbiome
- (2021) Mathieu Groussin et al. CELL
- Recent advances in culture-based gut microbiome research
- (2021) Thomas C.A. Hitch et al. INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY
- A Microbiota-Directed Food Intervention for Undernourished Children
- (2021) Robert Y. Chen et al. NEW ENGLAND JOURNAL OF MEDICINE
- Dietary Fibre Modulates the Gut Microbiota
- (2021) Peter Cronin et al. Nutrients
- Strain engraftment competition and functional augmentation in a multi-donor fecal microbiota transplantation trial for obesity
- (2021) Brooke C. Wilson et al. Microbiome
- Berberine, a potential prebiotic to indirectly promote Akkermansia growth through stimulating gut mucin secretion
- (2021) Chaoran Dong et al. BIOMEDICINE & PHARMACOTHERAPY
- Immunomodulatory roles of microbiota-derived short-chain fatty acids in bacterial infections
- (2021) Reza Ranjbar et al. BIOMEDICINE & PHARMACOTHERAPY
- Bifidobacteria-mediated immune system imprinting early in life
- (2021) Bethany M. Henrick et al. CELL
- Gut-microbiota-targeted diets modulate human immune status
- (2021) Hannah C. Wastyk et al. CELL
- Fecal filtrate transplantation protects against necrotizing enterocolitis
- (2021) Anders Brunse et al. ISME Journal
- Bioaccumulation of therapeutic drugs by human gut bacteria
- (2021) Martina Klünemann et al. NATURE
- Gut microbiota signatures are associated with toxicity to combined CTLA-4 and PD-1 blockade
- (2021) Miles C. Andrews et al. NATURE MEDICINE
- Design of synthetic human gut microbiome assembly and butyrate production
- (2021) Ryan L. Clark et al. Nature Communications
- Mediterranean Diet to Prevent the Development of Colon Diseases: A Meta-Analysis of Gut Microbiota Studies
- (2021) Oscar Illescas et al. Nutrients
- The Probiotic Strain H. alvei HA4597® Improves Weight Loss in Overweight Subjects under Moderate Hypocaloric Diet: A Proof-of-Concept, Multicenter Randomized, Double-Blind Placebo-Controlled Study
- (2021) Pierre Déchelotte et al. Nutrients
- How to Apply FMT More Effectively, Conveniently and Flexible – A Comparison of FMT Methods
- (2021) Adorján Varga et al. Frontiers in Cellular and Infection Microbiology
- The Influence of Cesarean Section on the Composition and Development of Gut Microbiota During the First 3 Months of Life
- (2021) Gao Long et al. Frontiers in Microbiology
- Prebiotic Inulin and Sodium Butyrate Attenuate Obesity-Induced Intestinal Barrier Dysfunction by Induction of Antimicrobial Peptides
- (2021) Julia Beisner et al. Frontiers in Immunology
- Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome
- (2021) Stephen Nayfach et al. Nature Microbiology
- A rationally designed oral vaccine induces immunoglobulin A in the murine gut that directs the evolution of attenuated Salmonella variants
- (2021) Médéric Diard et al. Nature Microbiology
- Oral administration of maternal vaginal microbes at birth to restore gut microbiome development in infants born by caesarean section: A pilot randomised placebo-controlled trial
- (2021) Brooke C. Wilson et al. EBioMedicine
- MiMiC: a bioinformatic approach for generation of synthetic communities from metagenomes
- (2021) Neeraj Kumar et al. Microbial Biotechnology
- Safety of pasteurised Akkermansia muciniphila as a novel food pursuant to Regulation (EU) 2015/2283
- (2021) et al. EFSA Journal
- E. coli enhance colonization resistance against Salmonella Typhimurium by competing for galactitol, a context-dependent limiting carbon source
- (2021) Claudia Eberl et al. Cell Host & Microbe
- Human gut bacterial metabolism drives Th17 activation and colitis
- (2021) Margaret Alexander et al. Cell Host & Microbe
- Klebsiella oxytoca causes colonization resistance against multidrug-resistant K. pneumoniae in the gut via cooperative carbohydrate competition
- (2021) Lisa Osbelt et al. Cell Host & Microbe
- Recent understanding of human milk oligosaccharides in establishing infant gut microbiome and roles in immune system
- (2021) Ravindra Pal Singh et al. FOOD RESEARCH INTERNATIONAL
- Engineering Bacteroides thetaiotaomicron to produce non-native butyrate based on a genome-scale metabolic model-guided design
- (2021) Kangsan Kim et al. METABOLIC ENGINEERING
- Role of the gut microbiome in cardiovascular drug response: The potential for clinical application
- (2021) Heidi E. Steiner et al. PHARMACOTHERAPY
- High-coverage metabolomics uncovers microbiota-driven biochemical landscape of interorgan transport and gut-brain communication in mice
- (2021) Yunjia Lai et al. Nature Communications
- Identification and characterization of a novel Enterococcus bacteriophage with potential to ameliorate murine colitis
- (2021) Junko Nishio et al. Scientific Reports
- Distinct B cell subsets in Peyer’s patches convey probiotic effects by Limosilactobacillus reuteri
- (2021) Hao-Yu Liu et al. Microbiome
- Quantitative sequencing clarifies the role of disruptor taxa, oral microbiota, and strict anaerobes in the human small-intestine microbiome
- (2021) Jacob T. Barlow et al. Microbiome
- Bifidobacterium species associated with breastfeeding produce aromatic lactic acids in the infant gut
- (2021) Martin F. Laursen et al. Nature Microbiology
- Mycobiota-induced IgA antibodies regulate fungal commensalism in the gut and are dysregulated in Crohn’s disease
- (2021) Itai Doron et al. Nature Microbiology
- Lyophilised oral faecal microbiota transplantation for ulcerative colitis (LOTUS): a randomised, double-blind, placebo-controlled trial
- (2021) Craig Haifer et al. Lancet Gastroenterology & Hepatology
- Commensal Bifidobacterium Strains Enhance the Efficacy of Neo-Epitope Based Cancer Vaccines
- (2021) Michele Tomasi et al. Vaccines
- Surface-Displayed Amuc_1100 From Akkermansia muciniphila on Lactococcus lactis ZHY1 Improves Hepatic Steatosis and Intestinal Health in High-Fat-Fed Zebrafish
- (2021) Feng-Li Zhang et al. Frontiers in Nutrition
- Establishing or Exaggerating Causality for the Gut Microbiome: Lessons from Human Microbiota-Associated Rodents
- (2020) Jens Walter et al. CELL
- Precision Microbiome Modulation with Discrete Dietary Fiber Structures Directs Short-Chain Fatty Acid Production
- (2020) Edward C. Deehan et al. Cell Host & Microbe
- Oral butyrate does not affect innate immunity and islet autoimmunity in individuals with longstanding type 1 diabetes: a randomised controlled trial
- (2020) Pieter F. de Groot et al. DIABETOLOGIA
- Global chemical effects of the microbiome include new bile-acid conjugations
- (2020) Robert A. Quinn et al. NATURE
- Conserved and variable responses of the gut microbiome to resistant starch type 2
- (2020) Zachary A. Bendiks et al. NUTRITION RESEARCH
- Fecal microbiota transplantation to maintain remission in Crohn’s disease: a pilot randomized controlled study
- (2020) Harry Sokol et al. Microbiome
- Effects of Antibiotic Pretreatment of an Ulcerative Colitis-Derived Fecal Microbial Community on the Integration of Therapeutic Bacteria In Vitro
- (2020) Kaitlyn Oliphant et al. mSystems
- The role of the gut microbiome on the efficacy of immune checkpoint inhibitors in Japanese responder patients with advanced non-small cell lung cancer
- (2020) Yuki Katayama et al. Translational Lung Cancer Research
- Interaction Between the Microbiota, Epithelia, and Immune Cells in the Intestine
- (2020) Hisako Kayama et al. Annual Review of Immunology
- Propionic Acid Shapes the Multiple Sclerosis Disease Course by an Immunomodulatory Mechanism
- (2020) Alexander Duscha et al. CELL
- Ursodeoxycholic Acid (UDCA) Mitigates the Host Inflammatory Response during Clostridioides difficile Infection by Altering Gut Bile Acids
- (2020) Jenessa A. Winston et al. INFECTION AND IMMUNITY
- Propionate supplementation promotes the expansion of peripheral regulatory T-Cells in patients with end-stage renal disease
- (2020) Fabian Meyer et al. JOURNAL OF NEPHROLOGY
- Colonic microbiota is associated with inflammation and host epigenomic alterations in inflammatory bowel disease
- (2020) F. J. Ryan et al. Nature Communications
- Large-scale genome-wide analysis links lactic acid bacteria from food with the gut microbiome
- (2020) Edoardo Pasolli et al. Nature Communications
- Current Sampling Methods for Gut Microbiota: A Call for More Precise Devices
- (2020) Qiang Tang et al. Frontiers in Cellular and Infection Microbiology
- Consumption of Fermented Foods Is Associated with Systematic Differences in the Gut Microbiome and Metabolome
- (2020) Bryn C. Taylor et al. mSystems
- Matching between Donors and Ulcerative Colitis Patients Is Important for Long-Term Maintenance after Fecal Microbiota Transplantation
- (2020) Koki Okahara et al. Journal of Clinical Medicine
- The Spatial Heterogeneity of the Gut Limits Predation and Fosters Coexistence of Bacteria and Bacteriophages
- (2020) Marta Lourenço et al. Cell Host & Microbe
- An ecological framework to understand the efficacy of fecal microbiota transplantation
- (2020) Yandong Xiao et al. Nature Communications
- Modulation of Macrophage Function by Lactobacillus-Conditioned Medium
- (2020) Yashaswini Seenappanahalli Nanjundaiah et al. Frontiers in Cell and Developmental Biology
- Live Biotherapeutic Products, A Road Map for Safety Assessment
- (2020) Alice Rouanet et al. Frontiers in Medicine
- Bifidobacterium breve UCC2003 Induces a Distinct Global Transcriptomic Program in Neonatal Murine Intestinal Epithelial Cells
- (2020) Raymond Kiu et al. iScience
- Maternal Fecal Microbiota Transplantation in Cesarean-Born Infants Rapidly Restores Normal Gut Microbial Development: A Proof-of-Concept Study
- (2020) Katri Korpela et al. CELL
- Effects of Diet-Modulated Autologous Fecal Microbiota Transplantation on Weight Regain
- (2020) Ehud Rinott et al. GASTROENTEROLOGY
- Re-Evaluating the Evidence for Faecal Microbiota Transplantation ‘Super-Donors’ in Inflammatory Bowel Disease
- (2020) Scott W Olesen et al. Journal of Crohns & Colitis
- Effect of Lactobacillus rhamnosus GG on Energy Metabolism, Leptin Resistance, and Gut Microbiota in Mice with Diet-Induced Obesity
- (2020) Yu-Chieh Cheng et al. Nutrients
- Compositional and functional differences of the mucosal microbiota along the intestine of healthy individuals
- (2020) Stefania Vaga et al. Scientific Reports
- Comparison of gut microbiota in exclusively breast-fed and formula-fed babies: a study of 91 term infants
- (2020) Jingran Ma et al. Scientific Reports
- Gut microbiota modulation with long-chain corn bran arabinoxylan in adults with overweight and obesity is linked to an individualized temporal increase in fecal propionate
- (2020) Nguyen K. Nguyen et al. Microbiome
- The early life education of the immune system: Moms, microbes and (missed) opportunities
- (2020) Nitya Jain Gut Microbes
- Opportunities and Challenges in Development of Live Biotherapeutic Products To Fight Infections
- (2020) Q R Ducarmon et al. JOURNAL OF INFECTIOUS DISEASES
- The effect of Tauroursodeoxycholic acid (TUDCA) and gut microbiota on murine gallbladder stone formation
- (2020) Qifan Lu et al. Annals of Hepatology
- Effects of ursodeoxycholic acid on the gut microbiome and colorectal adenoma development
- (2019) Talima Pearson et al. Cancer Medicine
- The ketogenic diet influences taxonomic and functional composition of the gut microbiota in children with severe epilepsy
- (2019) Marie Lindefeldt et al. npj Biofilms and Microbiomes
- Dietary Arginine Regulates Severity of Experimental Colitis and Affects the Colonic Microbiome
- (2019) Kshipra Singh et al. Frontiers in Cellular and Infection Microbiology
- A human gut bacterial genome and culture collection for improved metagenomic analyses
- (2019) Samuel C. Forster et al. NATURE BIOTECHNOLOGY
- The Short Chain Fatty Acid Butyrate Imprints an Antimicrobial Program in Macrophages
- (2019) Julie Schulthess et al. IMMUNITY
- Structural weakening of the colonic mucus barrier is an early event in ulcerative colitis pathogenesis
- (2019) Sjoerd van der Post et al. GUT
- Distinct Genetic and Functional Traits of Human Intestinal Prevotella copri Strains Are Associated with Different Habitual Diets
- (2019) Francesca De Filippis et al. Cell Host & Microbe
- Expansion of Bacteriophages Is Linked to Aggravated Intestinal Inflammation and Colitis
- (2019) Lasha Gogokhia et al. Cell Host & Microbe
- Production of a Functional Factor, p40, by Lactobacillus rhamnosus GG Is Promoted by Intestinal Epithelial Cell-secreted Extracellular Vesicles
- (2019) Luyao Yang et al. INFECTION AND IMMUNITY
- Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer
- (2019) Jakob Wirbel et al. NATURE MEDICINE
- Progesterone Increases Bifidobacterium Relative Abundance during Late Pregnancy
- (2019) Meital Nuriel-Ohayon et al. Cell Reports
- Metabolites of lactic acid bacteria present in fermented foods are highly potent agonists of human hydroxycarboxylic acid receptor 3
- (2019) Anna Peters et al. PLoS Genetics
- Elucidation of Akkermansia muciniphila Probiotic Traits Driven by Mucin Depletion
- (2019) Jongoh Shin et al. Frontiers in Microbiology
- Stereotypes About Enterotype: the Old and New Ideas
- (2019) Mingyue Cheng et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- A Multi-omics Approach to Unraveling the Microbiome-Mediated Effects of Arabinoxylan Oligosaccharides in Overweight Humans
- (2019) Alfonso Benítez-Páez et al. mSystems
- A complex human gut microbiome cultured in an anaerobic intestine-on-a-chip
- (2019) Sasan Jalili-Firoozinezhad et al. Nature Biomedical Engineering
- Multiple levels of the unknown in microbiome research
- (2019) Andrew Maltez Thomas et al. BMC BIOLOGY
- Dynamic Modulation of the Gut Microbiota and Metabolome by Bacteriophages in a Mouse Model
- (2019) Bryan B. Hsu et al. Cell Host & Microbe
- Propionate alleviates high fat diet‐induced lipid dysmetabolism by modulating gut microbiota in mice
- (2019) Bo Song et al. JOURNAL OF APPLIED MICROBIOLOGY
- Human placenta has no microbiome but can contain potential pathogens
- (2019) Marcus C. de Goffau et al. NATURE
- Supplementation with Akkermansia muciniphila in overweight and obese human volunteers: a proof-of-concept exploratory study
- (2019) Clara Depommier et al. NATURE MEDICINE
- Bifidobacterium dentium Fortifies the Intestinal Mucus Layer via Autophagy and Calcium Signaling Pathways
- (2019) Melinda A. Engevik et al. mBio
- Durable Long-Term Bacterial Engraftment following Encapsulated Fecal Microbiota Transplantation To Treat Clostridium difficile Infection
- (2019) Christopher Staley et al. mBio
- Dietary Fibers from Fruits and Vegetables and Their Health Benefits via Modulation of Gut Microbiota
- (2019) Jiefen Cui et al. COMPREHENSIVE REVIEWS IN FOOD SCIENCE AND FOOD SAFETY
- Stunted microbiota and opportunistic pathogen colonization in caesarean-section birth
- (2019) Yan Shao et al. NATURE
- A library of human gut bacterial isolates paired with longitudinal multiomics data enables mechanistic microbiome research
- (2019) M. Poyet et al. NATURE MEDICINE
- Diet–microbiota interactions and personalized nutrition
- (2019) Aleksandra A. Kolodziejczyk et al. NATURE REVIEWS MICROBIOLOGY
- Effects of microbiota-directed foods in gnotobiotic animals and undernourished children
- (2019) Jeanette L. Gehrig et al. SCIENCE
- Incidence of necrotising enterocolitis before and after introducing routine prophylactic Lactobacillus and Bifidobacterium probiotics
- (2019) Claire Robertson et al. Archives of Disease in Childhood-Fetal and Neonatal Edition
- Breast milk-derived human milk oligosaccharides promote Bifidobacterium interactions within a single ecosystem
- (2019) Melissa A. E. Lawson et al. ISME Journal
- Effect of exercise and butyrate supplementation on microbiota composition and lipid metabolism
- (2019) Chunxia Yu et al. JOURNAL OF ENDOCRINOLOGY
- Framework for rational donor selection in fecal microbiota transplant clinical trials
- (2019) Claire Duvallet et al. PLoS One
- A high-sugar diet rapidly enhances susceptibility to colitis via depletion of luminal short-chain fatty acids in mice
- (2019) Michael Laffin et al. Scientific Reports
- Microbial bile acid metabolites modulate gut RORγ+ regulatory T cell homeostasis
- (2019) Xinyang Song et al. NATURE
- Chronic inflammation in the etiology of disease across the life span
- (2019) David Furman et al. NATURE MEDICINE
- Early life nutrition influences susceptibility to chronic inflammatory colitis in later life
- (2019) Delphine Ley et al. Scientific Reports
- OUP accepted manuscript
- (2018) AMERICAN JOURNAL OF CLINICAL NUTRITION
- The Long-Term Impact of High Levels of Alpha-Melanocyte-Stimulating Hormone in Energy Balance Among Obese Adolescents
- (2018) Ana Claudia Pelissari Kravchychyn et al. ANNALS OF NUTRITION AND METABOLISM
- The Gut Microbiota Mediates the Anti-Seizure Effects of the Ketogenic Diet
- (2018) Christine A. Olson et al. CELL
- Strain Tracking Reveals the Determinants of Bacterial Engraftment in the Human Gut Following Fecal Microbiota Transplantation
- (2018) Christopher S. Smillie et al. Cell Host & Microbe
- An Integrated Understanding of the Rapid Metabolic Benefits of a Carbohydrate-Restricted Diet on Hepatic Steatosis in Humans
- (2018) Adil Mardinoglu et al. Cell Metabolism
- To engraft or not to engraft: an ecological framework for gut microbiome modulation with live microbes
- (2018) Jens Walter et al. CURRENT OPINION IN BIOTECHNOLOGY
- Prevotella-to-Bacteroides ratio predicts body weight and fat loss success on 24-week diets varying in macronutrient composition and dietary fiber: results from a post-hoc analysis
- (2018) Mads F. Hjorth et al. INTERNATIONAL JOURNAL OF OBESITY
- Supplementation of p40, a Lactobacillus rhamnosus GG-derived protein, in early life promotes epidermal growth factor receptor-dependent intestinal development and long-term health outcomes
- (2018) Xi Shen et al. Mucosal Immunology
- Aryl hydrocarbon receptor and intestinal immunity
- (2018) Bruno Lamas et al. Mucosal Immunology
- An exclusive metabolic niche enables strain engraftment in the gut microbiota
- (2018) Elizabeth Stanley Shepherd et al. NATURE
- Bilophila wadsworthia aggravates high fat diet induced metabolic dysfunctions in mice
- (2018) Jane M. Natividad et al. Nature Communications
- The Western Diet–Microbiome-Host Interaction and Its Role in Metabolic Disease
- (2018) Marit Zinöcker et al. Nutrients
- Discovery and characterization of a prevalent human gut bacterial enzyme sufficient for the inactivation of a family of plant toxins
- (2018) Nitzan Koppel et al. eLife
- Probiotic Bifidobacterium strains and galactooligosaccharides improve intestinal barrier function in obese adults but show no synergism when used together as synbiotics
- (2018) Janina A. Krumbeck et al. Microbiome
- Microbiome: Focus on Causation and Mechanism
- (2018) Michael A. Fischbach CELL
- Post-Antibiotic Gut Mucosal Microbiome Reconstitution Is Impaired by Probiotics and Improved by Autologous FMT
- (2018) Jotham Suez et al. CELL
- Environment dominates over host genetics in shaping human gut microbiota
- (2018) Daphna Rothschild et al. NATURE
- Reconstitution of the gut microbiota of antibiotic-treated patients by autologous fecal microbiota transplant
- (2018) Ying Taur et al. Science Translational Medicine
- Dysregulated Microbial Fermentation of Soluble Fiber Induces Cholestatic Liver Cancer
- (2018) Vishal Singh et al. CELL
- A four-strain probiotic exerts positive immunomodulatory effects by enhancing colonic butyrate production in vitro
- (2018) Frédéric Moens et al. INTERNATIONAL JOURNAL OF PHARMACEUTICS
- Temporal development of the gut microbiome in early childhood from the TEDDY study
- (2018) Christopher J. Stewart et al. NATURE
- Fight them or feed them: how the intestinal mucus layer manages the gut microbiota
- (2018) Bjoern O Schroeder Gastroenterology Report
- The Human Microbiome and Child Growth – First 1000 Days and Beyond
- (2018) Ruairi C. Robertson et al. TRENDS IN MICROBIOLOGY
- Breastfeeding, maternal asthma and wheezing in the first year of life: a longitudinal birth cohort study
- (2017) Meghan B. Azad et al. EUROPEAN RESPIRATORY JOURNAL
- Efficacy of Sterile Fecal Filtrate Transfer for Treating Patients With Clostridium difficile Infection
- (2017) Stephan J. Ott et al. GASTROENTEROLOGY
- Low eukaryotic viral richness is associated with faecal microbiota transplantation success in patients with UC
- (2017) Nádia Conceição-Neto et al. GUT
- Prebiotic inulin-type fructans induce specific changes in the human gut microbiota
- (2017) Doris Vandeputte et al. GUT
- Supplementation of Low- and High-fat Diets with Fermentable Fiber Exacerbates Severity of DSS-induced Acute Colitis
- (2017) Jennifer P. Miles et al. INFLAMMATORY BOWEL DISEASES
- Pre-treatment microbial Prevotella-to-Bacteroides ratio, determines body fat loss success during a 6-month randomized controlled diet intervention
- (2017) M F Hjorth et al. INTERNATIONAL JOURNAL OF OBESITY
- Large-scale comparative metagenomics of Blastocystis, a common member of the human gut microbiome
- (2017) Francesco Beghini et al. ISME Journal
- Divergent functional isoforms drive niche specialisation for nutrient acquisition and use in rumen microbiome
- (2017) Francesco Rubino et al. ISME Journal
- Fibre intake and the development of inflammatory bowel disease: A European prospective multi-centre cohort study (EPIC-IBD)
- (2017) Vibeke Andersen et al. Journal of Crohns & Colitis
- Microbial-Derived Butyrate Promotes Epithelial Barrier Function through IL-10 Receptor–Dependent Repression of Claudin-2
- (2017) Leon Zheng et al. JOURNAL OF IMMUNOLOGY
- Tauroursodeoxycholic acid protects bile acid homeostasis under inflammatory conditions and dampens Crohn’s disease-like ileitis
- (2017) Lien Van den Bossche et al. LABORATORY INVESTIGATION
- Mucin Cross-Feeding of Infant Bifidobacteria and Eubacterium hallii
- (2017) Vera Bunesova et al. MICROBIAL ECOLOGY
- Expert consensus document: The International Scientific Association for Probiotics and Prebiotics (ISAPP) consensus statement on the definition and scope of prebiotics
- (2017) Glenn R. Gibson et al. Nature Reviews Gastroenterology & Hepatology
- Lithocholic acid controls adaptive immune responses by inhibition of Th1 activation through the Vitamin D receptor
- (2017) Thijs W. H. Pols et al. PLoS One
- Effect of water flow and chemical environment on microbiota growth and composition in the human colon
- (2017) Jonas Cremer et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Gut microbiome influences efficacy of PD-1–based immunotherapy against epithelial tumors
- (2017) Bertrand Routy et al. SCIENCE
- First Foods and Gut Microbes
- (2017) Martin F. Laursen et al. Frontiers in Microbiology
- Next-generation probiotics: the spectrum from probiotics to live biotherapeutics
- (2017) Paul W. O’Toole et al. Nature Microbiology
- Enterotypes in the landscape of gut microbial community composition
- (2017) Paul I. Costea et al. Nature Microbiology
- Butyrate Supplementation at High Concentrations Alters Enteric Bacterial Communities and Reduces Intestinal Inflammation in Mice Infected with Citrobacter rodentium
- (2017) Janelle A. Jiminez et al. mSphere
- Pili-like proteins of Akkermansia muciniphila modulate host immune responses and gut barrier function
- (2017) Noora Ottman et al. PLoS One
- Lactate-utilizing community is associated with gut microbiota dysbiosis in colicky infants
- (2017) Van T. Pham et al. Scientific Reports
- A Dietary Fiber-Deprived Gut Microbiota Degrades the Colonic Mucus Barrier and Enhances Pathogen Susceptibility
- (2016) Mahesh S. Desai et al. CELL
- Stable Engraftment of Bifidobacterium longum AH1206 in the Human Gut Depends on Individualized Features of the Resident Microbiome
- (2016) María X. Maldonado-Gómez et al. Cell Host & Microbe
- Bile Acids Control Inflammation and Metabolic Disorder through Inhibition of NLRP3 Inflammasome
- (2016) Chuansheng Guo et al. IMMUNITY
- Neonatal colonization of mice with LGG promotes intestinal development and decreases susceptibility to colitis in adulthood
- (2016) F Yan et al. Mucosal Immunology
- Partial restoration of the microbiota of cesarean-born infants via vaginal microbial transfer
- (2016) Maria G Dominguez-Bello et al. NATURE MEDICINE
- CARD9 impacts colitis by altering gut microbiota metabolism of tryptophan into aryl hydrocarbon receptor ligands
- (2016) Bruno Lamas et al. NATURE MEDICINE
- A purified membrane protein from Akkermansia muciniphila or the pasteurized bacterium improves metabolism in obese and diabetic mice
- (2016) Hubert Plovier et al. NATURE MEDICINE
- Core Concept: Prebiotics gain prominence but remain poorly defined
- (2016) Alla Katsnelson PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The maternal microbiota drives early postnatal innate immune development
- (2016) M. Gomez de Aguero et al. SCIENCE
- Population-level analysis of gut microbiome variation
- (2016) Gwen Falony et al. SCIENCE
- A Critical Look at Prebiotics Within the Dietary Fiber Concept
- (2016) Joran Verspreet et al. Annual Review of Food Science and Technology
- Alterations in fecal microbiota composition by probiotic supplementation in healthy adults: a systematic review of randomized controlled trials
- (2016) Nadja B. Kristensen et al. Genome Medicine
- Dietary fat and gut microbiota interactions determine diet-induced obesity in mice
- (2016) Raphaela Kübeck et al. Molecular Metabolism
- Oral Phage Therapy of Acute Bacterial Diarrhea With Two Coliphage Preparations: A Randomized Trial in Children From Bangladesh
- (2016) Shafiqul Alam Sarker et al. EBioMedicine
- Personalized Nutrition by Prediction of Glycemic Responses
- (2015) David Zeevi et al. CELL
- Dietary Fiber-Induced Improvement in Glucose Metabolism Is Associated with Increased Abundance of Prevotella
- (2015) Petia Kovatcheva-Datchary et al. Cell Metabolism
- Findings From a Randomized Controlled Trial of Fecal Transplantation for Patients With Ulcerative Colitis
- (2015) Noortje G. Rossen et al. GASTROENTEROLOGY
- High-level adherence to a Mediterranean diet beneficially impacts the gut microbiota and associated metabolome
- (2015) Francesca De Filippis et al. GUT
- The Intestinal Microbiota Contributes to the Ability of Helminths to Modulate Allergic Inflammation
- (2015) Mario M. Zaiss et al. IMMUNITY
- Towards a more comprehensive concept for prebiotics
- (2015) Laure B. Bindels et al. Nature Reviews Gastroenterology & Hepatology
- Gut biogeography of the bacterial microbiota
- (2015) Gregory P. Donaldson et al. NATURE REVIEWS MICROBIOLOGY
- Two-step enzymatic synthesis of ursodeoxycholic acid with a new 7β-hydroxysteroid dehydrogenase from Ruminococcus torques
- (2015) Ming-Min Zheng et al. PROCESS BIOCHEMISTRY
- Anticancer immunotherapy by CTLA-4 blockade relies on the gut microbiota
- (2015) M. Vetizou et al. SCIENCE
- Gastrointestinal pH and Transit Time Profiling in Healthy Volunteers Using the IntelliCap System Confirms Ileo-Colonic Release of ColoPulse Tablets
- (2015) Jacoba M. Maurer et al. PLoS One
- Randomised clinical trial: a liquid multi-strain probiotic vs. placebo in the irritable bowel syndrome - a 12 week double-blind study
- (2014) G. Sisson et al. ALIMENTARY PHARMACOLOGY & THERAPEUTICS
- Rethinking “Enterotypes”
- (2014) Dan Knights et al. Cell Host & Microbe
- Vitamin B 12 as a Modulator of Gut Microbial Ecology
- (2014) Patrick H. Degnan et al. Cell Metabolism
- Correlation Between Intraluminal Oxygen Gradient and Radial Partitioning of Intestinal Microbiota
- (2014) Lindsey Albenberg et al. GASTROENTEROLOGY
- TLR5-Mediated Sensing of Gut Microbiota Is Necessary for Antibody Responses to Seasonal Influenza Vaccination
- (2014) Jason Z. Oh et al. IMMUNITY
- Immunogenicity Studies of Proteins Forming the T4 Phage Head Surface
- (2014) K. D browska et al. JOURNAL OF VIROLOGY
- The International Scientific Association for Probiotics and Prebiotics consensus statement on the scope and appropriate use of the term probiotic
- (2014) Colin Hill et al. Nature Reviews Gastroenterology & Hepatology
- A Prospective Study of Long-term Intake of Dietary Fiber and Risk of Crohn's Disease and Ulcerative Colitis
- (2013) Ashwin N. Ananthakrishnan et al. GASTROENTEROLOGY
- An increase in theAkkermansiaspp. population induced by metformin treatment improves glucose homeostasis in diet-induced obese mice
- (2013) Na-Ri Shin et al. GUT
- Tryptophan Catabolites from Microbiota Engage Aryl Hydrocarbon Receptor and Balance Mucosal Reactivity via Interleukin-22
- (2013) Teresa Zelante et al. IMMUNITY
- ALactobacillus rhamnosusGG-derived Soluble Protein, p40, Stimulates Ligand Release from Intestinal Epithelial Cells to Transactivate Epidermal Growth Factor Receptor
- (2013) Fang Yan et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Richness of human gut microbiome correlates with metabolic markers
- (2013) Emmanuelle Le Chatelier et al. NATURE
- Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation
- (2013) Nicholas Arpaia et al. NATURE
- Medicines from microbiota
- (2013) Bernat Olle NATURE BIOTECHNOLOGY
- The gastrointestinal mucus system in health and disease
- (2013) Malin E. V. Johansson et al. Nature Reviews Gastroenterology & Hepatology
- Duodenal Infusion of Donor Feces for Recurrent Clostridium difficile
- (2013) Els van Nood et al. NEW ENGLAND JOURNAL OF MEDICINE
- Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity
- (2013) A. Everard et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Long-Term Stability of the Human Gut Microbiota
- (2013) J. J. Faith et al. SCIENCE
- Predicting and Manipulating Cardiac Drug Inactivation by the Human Gut Bacterium Eggerthella lenta
- (2013) H. J. Haiser et al. SCIENCE
- Should We Standardize the 1,700-Year-Old Fecal Microbiota Transplantation?
- (2012) Faming Zhang et al. AMERICAN JOURNAL OF GASTROENTEROLOGY
- Probiotics prevent necrotizing enterocolitis by modulating enterocyte genes that regulate innate immune-mediated inflammation
- (2012) Kriston Ganguli et al. AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY
- Lactocepin Secreted By Lactobacillus Exerts Anti-Inflammatory Effects By Selectively Degrading Proinflammatory Chemokines
- (2012) Marie-Anne von Schillde et al. Cell Host & Microbe
- The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates
- (2012) Erwin G Zoetendal et al. ISME Journal
- Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon
- (2012) Xiaolei Ze et al. ISME Journal
- Gut microbiome composition is linked to whole grain-induced immunological improvements
- (2012) Inés Martínez et al. ISME Journal
- Probiotics for the Prevention and Treatment of Antibiotic-Associated Diarrhea
- (2012) Sydne J. Newberry JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION
- Selective carbohydrate utilization by lactobacilli and bifidobacteria
- (2012) D. Watson et al. JOURNAL OF APPLIED MICROBIOLOGY
- Bifidobacteria Isolated From Infants and Cultured on Human Milk Oligosaccharides Affect Intestinal Epithelial Function
- (2012) Maciej Chichlowski et al. JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION
- Genomic variation landscape of the human gut microbiome
- (2012) Siegfried Schloissnig et al. NATURE
- Comparison with ancestral diets suggests dense acellular carbohydrates promote an inflammatory microbiota, and may be the primary dietary cause of leptin resistance and obesity
- (2012) Ian Spreadbury Diabetes Metabolic Syndrome and Obesity-Targets and Therapy
- High-Dose Ursodeoxycholic Acid Is Associated With the Development of Colorectal Neoplasia in Patients With Ulcerative Colitis and Primary Sclerosing Cholangitis
- (2011) John E Eaton et al. AMERICAN JOURNAL OF GASTROENTEROLOGY
- Carcinogenicity of deoxycholate, a secondary bile acid
- (2011) Carol Bernstein et al. ARCHIVES OF TOXICOLOGY
- Eating For Two: How Metabolism Establishes Interspecies Interactions in the Gut
- (2011) Michael A. Fischbach et al. Cell Host & Microbe
- Aryl Hydrocarbon Receptor-Induced Signals Up-regulate IL-22 Production and Inhibit Inflammation in the Gastrointestinal Tract
- (2011) Ivan Monteleone et al. GASTROENTEROLOGY
- AHR drives the development of gut ILC22 cells and postnatal lymphoid tissues via pathways dependent on and independent of Notch
- (2011) Jacob S Lee et al. NATURE IMMUNOLOGY
- Exposure to Environmental Microorganisms and Childhood Asthma
- (2011) Markus J. Ege et al. NEW ENGLAND JOURNAL OF MEDICINE
- Bacterial biogeography of the human digestive tract
- (2011) Jennifer C. Stearns et al. Scientific Reports
- Importance and regulation of the colonic mucus barrier in a mouse model of colitis
- (2010) J. Petersson et al. AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY
- Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes
- (2010) L. Tasse et al. GENOME RESEARCH
- A dose dependent impact of prebiotic galactooligosaccharides on the intestinal microbiota of healthy adults
- (2010) L.M.G. Davis et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
- A human gut microbial gene catalogue established by metagenomic sequencing
- (2010) Junjie Qin et al. NATURE
- Resistant Starches Types 2 and 4 Have Differential Effects on the Composition of the Fecal Microbiota in Human Subjects
- (2010) Inés Martínez et al. PLoS One
- Lactobacillus casei downregulates commensalsʼ inflammatory signals in Crohnʼs disease mucosa
- (2008) Marta Llopis et al. INFLAMMATORY BOWEL DISEASES
- The Probiotic Lactobacillus GG may Augment Intestinal Host Defense by Regulating Apoptosis and Promoting Cytoprotective Responses in the Developing Murine Gut
- (2008) Patricia W Lin et al. PEDIATRIC RESEARCH
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