A high-sugar diet rapidly enhances susceptibility to colitis via depletion of luminal short-chain fatty acids in mice

Distal versus proximal intestinal short-chain fatty acid release in man

(2018) Evelien PJG Neis et al.   GUT

The Artificial Sweetener Splenda Promotes Gut Proteobacteria, Dysbiosis, and Myeloperoxidase Reactivity in Crohn’s Disease–Like Ileitis

(2018) Alexander Rodriguez-Palacios et al.   INFLAMMATORY BOWEL DISEASES

OUP accepted manuscript

(2018)   Advances in Nutrition

Dynamics of Colon Monocyte and Macrophage Activation During Colitis

(2018) Gareth-Rhys Jones et al.   Frontiers in Immunology

Short-chain fatty acids augment rat duodenal mucosal barrier function

(2017) Wan Salman Wan Saudi et al.   EXPERIMENTAL PHYSIOLOGY

Understanding and Preventing the Global Increase of Inflammatory Bowel Disease

(2017) Gilaad G. Kaplan et al.   GASTROENTEROLOGY

Diet as a Trigger or Therapy for Inflammatory Bowel Diseases

(2017) James D. Lewis et al.   GASTROENTEROLOGY

Worldwide incidence and prevalence of inflammatory bowel disease in the 21st century: a systematic review of population-based studies

(2017) Siew C Ng et al.   LANCET

Distinct Microbial Communities Trigger Colitis Development upon Intestinal Barrier Damage via Innate or Adaptive Immune Cells

(2017) Urmi Roy et al.   Cell Reports

Colonic Butyrate-Producing Communities in Humans: an Overview Using Omics Data

(2017) Marius Vital et al.   mSystems

Reduced Abundance of Butyrate-Producing Bacteria Species in the Fecal Microbial Community in Crohn's Disease

(2016) Kenichiro Takahashi et al.   DIGESTION

Worsening of Bowel Symptoms Through Diet in Patients With Inflammatory Bowel Disease

(2016) Hester Eppinga et al.   INFLAMMATORY BOWEL DISEASES

Diet and Exacerbation of Inflammatory Bowel Disease Symptoms—Food for Thought

(2016) Jimmy K. Limdi et al.   INFLAMMATORY BOWEL DISEASES

A Critical Role for Monocytes/Macrophages During Intestinal Inflammation-associated Lymphangiogenesis

(2016) Felix Becker et al.   INFLAMMATORY BOWEL DISEASES

Dietary Patterns and Risk of Inflammatory Bowel Disease in Europe

(2016) Antoine Racine et al.   INFLAMMATORY BOWEL DISEASES

Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity

(2016) Alexandra Zhernakova et al.   SCIENCE

Preventive rather than therapeutic treatment with high fiber diet attenuates clinical and inflammatory markers of acute and chronic DSS-induced colitis in mice

(2015) Ana Letícia Malheiros Silveira et al.   EUROPEAN JOURNAL OF NUTRITION

Short-chain fatty acid sensing in rat duodenum

(2015) Yasutada Akiba et al.   JOURNAL OF PHYSIOLOGY-LONDON

Metabolite-sensing receptors GPR43 and GPR109A facilitate dietary fibre-induced gut homeostasis through regulation of the inflammasome

(2015) Laurence Macia et al.   Nature Communications

The Treatment-Naive Microbiome in New-Onset Crohn’s Disease

(2014) Dirk Gevers et al.   Cell Host & Microbe

Macrophages in intestinal homeostasis and inflammation

(2014) Calum C. Bain et al.   IMMUNOLOGICAL REVIEWS

Artificial sweeteners induce glucose intolerance by altering the gut microbiota

(2014) Jotham Suez et al.   NATURE

The dynamics of gut-associated microbial communities during inflammation

(2013) Sebastian E Winter et al.   EMBO REPORTS

A Prospective Study of Long-term Intake of Dietary Fiber and Risk of Crohn's Disease and Ulcerative Colitis

(2013) Ashwin N. Ananthakrishnan et al.   GASTROENTEROLOGY

A decrease of the butyrate-producing speciesRoseburia hominisandFaecalibacterium prausnitziidefines dysbiosis in patients with ulcerative colitis

(2013) Kathleen Machiels et al.   GUT

Long-term intake of dietary fat and risk of ulcerative colitis and Crohn's disease

(2013) Ashwin N Ananthakrishnan et al.   GUT

G Protein-Coupled Receptor 43 Moderates Gut Inflammation Through Cytokine Regulation from Mononuclear Cells

(2013) Ryuta Masui et al.   INFLAMMATORY BOWEL DISEASES

Gut Microbiota Affects Sensitivity to Acute DSS-induced Colitis Independently of Host Genotype

(2013) Brigitta M. Brinkman et al.   INFLAMMATORY BOWEL DISEASES

The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates

(2012) Erwin G Zoetendal et al.   ISME Journal

Etiology of inflammatory bowel disease: A unified hypothesis

(2012) Xiaofa Qin   WORLD JOURNAL OF GASTROENTEROLOGY

Experimental Inflammatory Bowel Disease: Insights into the Host-Microbiota Dialog

(2011) Maya Saleh et al.   IMMUNITY

Cross-feeding between bifidobacteria and butyrate-producing colon bacteria explains bifdobacterial competitiveness, butyrate production, and gas production

(2011) Luc De Vuyst et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Environmental factors in inflammatory bowel disease: A case-control study based on a Danish inception cohort

(2011) Tanja Stenbaek Hansen et al.   Journal of Crohns & Colitis

Bifidobacteria can protect from enteropathogenic infection through production of acetate

(2011) Shinji Fukuda et al.   NATURE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Inflammatory Bowel Disease

(2009) Clara Abraham et al.   NEW ENGLAND JOURNAL OF MEDICINE