Coordinated proteome change precedes cell lysis and death in a mat-forming cyanobacterium
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Title
Coordinated proteome change precedes cell lysis and death in a mat-forming cyanobacterium
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Journal
ISME Journal
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2023-11-01
DOI
10.1038/s41396-023-01545-3
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Note: Only part of the references are listed.- Global mapping reveals increase in lacustrine algal blooms over the past decade
- (2022) Xuejiao Hou et al. Nature Geoscience
- Alternative functions of CRISPR–Cas systems in the evolutionary arms race
- (2022) Prarthana Mohanraju et al. NATURE REVIEWS MICROBIOLOGY
- A hyperpromiscuous antitoxin protein domain for the neutralization of diverse toxin domains
- (2022) Tatsuaki Kurata et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Evolutionary plasticity and functional versatility of CRISPR systems
- (2022) Eugene V. Koonin et al. PLOS BIOLOGY
- Ecological Interactions of Cyanobacteria and Heterotrophs Enhances the Robustness of Cyanobacterial Consortium for Carbon Sequestration
- (2022) Maryam Ataeian et al. Frontiers in Microbiology
- The Critical Role of Environmental Synergies in the Creation of Bionanohybrid Microbes
- (2022) Robert J. Barnes et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- The diverse arsenal of type III CRISPR–Cas-associated CARF and SAVED effectors
- (2022) Jurre A. Steens et al. BIOCHEMICAL SOCIETY TRANSACTIONS
- Prokaryote toxin–antitoxin modules: Complex regulation of an unclear function
- (2021) Pieter De Bruyn et al. PROTEIN SCIENCE
- Examining the Evidence for Regulated and Programmed Cell Death in Cyanobacteria. How Significant Are Different Forms of Cell Death in Cyanobacteria Population Dynamics?
- (2021) Daniel J. Franklin Frontiers in Microbiology
- Functional basis of electron transport within photosynthetic complex I
- (2021) Katherine H. Richardson et al. Nature Communications
- Microbiota associated with the large-scale outdoor cultivation of the cyanobacterium Synechococcus sp. PCC 7002
- (2021) Fiona K. Davies et al. Algal Research-Biomass Biofuels and Bioproducts
- Proteome and strain analysis of cyanobacterium Candidatus “Phormidium alkaliphilum” reveals traits for success in biotechnology
- (2021) Maryam Ataeian et al. iScience
- Structural insights into NDH-1 mediated cyclic electron transfer
- (2020) Chunli Zhang et al. Nature Communications
- Dynamic changes in community composition of Scenedesmus-seeded artificial, engineered microalgal biofilms
- (2020) Alexandre J. Paquette et al. Algal Research-Biomass Biofuels and Bioproducts
- The tale of caspase homologues and their evolutionary outlook: deciphering programmed cell death in cyanobacteria
- (2020) Samujjal Bhattacharjee et al. JOURNAL OF EXPERIMENTAL BOTANY
- Activation and self-inactivation mechanisms of the cyclic oligoadenylate-dependent CRISPR ribonuclease Csm6
- (2020) Carmela Garcia-Doval et al. Nature Communications
- Programmed cell death as a black queen in microbial communities
- (2020) Andrew Ndhlovu et al. MOLECULAR ECOLOGY
- More Is Not Always Better: Evaluation of 1D and 2D-LC-MS/MS Methods for Metaproteomics
- (2019) Tjorven Hinzke et al. Frontiers in Microbiology
- Direct capture and conversion of CO 2 from air by growing a cyanobacterial consortium at pH up to 11.2
- (2019) Maryam Ataeian et al. BIOTECHNOLOGY AND BIOENGINEERING
- Origins and evolution of CRISPR-Cas systems
- (2019) Eugene V. Koonin et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Post-stress bacterial cell death mediated by reactive oxygen species
- (2019) Yuzhi Hong et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- In search of blue
- (2019) Kai Kupferschmidt SCIENCE
- The Effect of Dissimilatory Manganese Reduction on Lactate Fermentation and Microbial Community Assembly
- (2019) Breda Novotnik et al. Frontiers in Microbiology
- MetaBAT 2: an adaptive binning algorithm for robust and efficient genome reconstruction from metagenome assemblies
- (2019) Dongwan D. Kang et al. PeerJ
- GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database
- (2019) Pierre-Alain Chaumeil et al. BIOINFORMATICS
- A shared core microbiome in soda lakes separated by large distances
- (2019) Jackie K. Zorz et al. Nature Communications
- An Integrated Pipeline for Annotation and Visualization of Metagenomic Contigs
- (2019) Xiaoli Dong et al. Frontiers in Genetics
- Programmed Cell Death-Like and Accompanying Release of Microcystin in Freshwater Bloom-Forming Cyanobacterium Microcystis: From Identification to Ecological Relevance
- (2019) Chenlin Hu et al. Toxins
- Energy limitation of cyanophage development: implications for marine carbon cycling
- (2018) Richard J. Puxty et al. ISME Journal
- Toxins, Targets, and Triggers: An Overview of Toxin-Antitoxin Biology
- (2018) Alexander Harms et al. MOLECULAR CELL
- Cyanobacterial blooms
- (2018) Jef Huisman et al. NATURE REVIEWS MICROBIOLOGY
- Structural adaptations of photosynthetic complex I enable ferredoxin-dependent electron transfer
- (2018) Jan M. Schuller et al. SCIENCE
- A Hard Day’s Night: Cyanobacteria in Diel Cycles
- (2018) David G. Welkie et al. TRENDS IN MICROBIOLOGY
- metaSPAdes: a new versatile metagenomic assembler
- (2017) Sergey Nurk et al. GENOME RESEARCH
- dRep: a tool for fast and accurate genomic comparisons that enables improved genome recovery from metagenomes through de-replication
- (2017) Matthew R Olm et al. ISME Journal
- The Role of Reactive Oxygen Species in Antibiotic-Mediated Killing of Bacteria
- (2017) Heleen Van Acker et al. TRENDS IN MICROBIOLOGY
- Assessing species biomass contributions in microbial communities via metaproteomics
- (2017) Manuel Kleiner et al. Nature Communications
- Draft genome sequence of Dethiobacter alkaliphilus strain AHT1T, a gram-positive sulfidogenic polyextremophile
- (2017) Emily Denise Melton et al. Standards in Genomic Sciences
- Contaminations in mass cultivation of cyanobacteria: Highly resilient Colpoda steinii leads to rapid crash of Synechocystis sp. cultures and is inhibited by partially anoxic conditions
- (2017) Clemens Troschl et al. Algal Research-Biomass Biofuels and Bioproducts
- Fast and Simple Analysis of MiSeq Amplicon Sequencing Data with MetaAmp
- (2017) Xiaoli Dong et al. Frontiers in Microbiology
- BBMerge – Accurate paired shotgun read merging via overlap
- (2017) Brian Bushnell et al. PLoS One
- Coupling immunity and programmed cell suicide in prokaryotes: Life-or-death choices
- (2016) Eugene V. Koonin et al. BIOESSAYS
- Programmed Cell Death in Unicellular Phytoplankton
- (2016) Kay D. Bidle CURRENT BIOLOGY
- The common bloom-forming cyanobacterium Microcystis is prone to a wide array of microbial antagonists
- (2016) Jeroen Van Wichelen et al. HARMFUL ALGAE
- Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
- (2016) Simon Roux et al. NATURE
- The NDH-1L-PSI Supercomplex Is Important for Efficient Cyclic Electron Transport in Cyanobacteria
- (2016) Fudan Gao et al. PLANT PHYSIOLOGY
- Chemosynthetic symbionts of marine invertebrate animals are capable of nitrogen fixation
- (2016) Jillian M. Petersen et al. Nature Microbiology
- Cyanobacterial Blue Color Formation during Lysis under Natural Conditions
- (2015) Suzue Arii et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
- (2015) Dinghua Li et al. BIOINFORMATICS
- CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
- (2015) Donovan H. Parks et al. GENOME RESEARCH
- An updated evolutionary classification of CRISPR–Cas systems
- (2015) Kira S. Makarova et al. NATURE REVIEWS MICROBIOLOGY
- Escherichia coli antitoxin MazE as transcription factor: insights into MazE-DNA binding
- (2015) Valentina Zorzini et al. NUCLEIC ACIDS RESEARCH
- Comparative genomic analyses reveal a vast, novel network of nucleotide-centric systems in biological conflicts, immunity and signaling
- (2015) A. Maxwell Burroughs et al. NUCLEIC ACIDS RESEARCH
- Die for the community: an overview of programmed cell death in bacteria
- (2015) N Allocati et al. Cell Death & Disease
- Photosystem I cyclic electron flow via chloroplast NADH dehydrogenase-like complex performs a physiological role for photosynthesis at low light
- (2015) Wataru Yamori et al. Scientific Reports
- VirSorter: mining viral signal from microbial genomic data
- (2015) Simon Roux et al. PeerJ
- MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
- (2015) Dongwan D. Kang et al. PeerJ
- Transcriptomic and proteomic dynamics in the metabolism of a diazotrophic cyanobacterium, Cyanothece sp. PCC 7822 during a diurnal light–dark cycle
- (2015) David Welkie et al. BMC GENOMICS
- Programmed death in a unicellular organism has species-specific fitness effects
- (2014) P. M. Durand et al. Biology Letters
- Reactive oxygen species and the bacterial response to lethal stress
- (2014) Xilin Zhao et al. CURRENT OPINION IN MICROBIOLOGY
- The Highly Conserved MraZ Protein Is a Transcriptional Regulator in Escherichia coli
- (2014) J. M. Eraso et al. JOURNAL OF BACTERIOLOGY
- Obtaining genomes from uncultivated environmental microorganisms using FACS–based single-cell genomics
- (2014) Christian Rinke et al. Nature Protocols
- Fermentation couples Chloroflexi and sulfate-reducing bacteria to Cyanobacteria in hypersaline microbial mats
- (2014) Jackson Z. Lee et al. Frontiers in Microbiology
- Isotopic biosignatures in carbonate-rich, cyanobacteria-dominated microbial mats of the Cariboo Plateau, B.C.
- (2013) A. L. Brady et al. Geobiology
- Programmed cell death in the marine cyanobacterium Trichodesmium mediates carbon and nitrogen export
- (2013) Edo Bar-Zeev et al. ISME Journal
- Harmful Cyanobacterial Blooms: Causes, Consequences, and Controls
- (2013) Hans W. Paerl et al. MICROBIAL ECOLOGY
- Bacterial programmed cell death: making sense of a paradox
- (2013) Kenneth W. Bayles NATURE REVIEWS MICROBIOLOGY
- Characterization of a Chromosomal Type II Toxin–Antitoxin System mazEaFa in the Cyanobacterium Anabaena sp. PCC 7120
- (2013) Degang Ning et al. PLoS One
- A Role for Programmed Cell Death in the Microbial Loop
- (2013) Mónica V. Orellana et al. PLoS One
- Altruism can evolve when relatedness is low: evidence from bacteria committing suicide upon phage infection
- (2013) D. Refardt et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Cyclic electron flow is redox-controlled but independent of state transition
- (2013) Hiroko Takahashi et al. Nature Communications
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom
- (2012) H. Teeling et al. SCIENCE
- Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water
- (2010) THORSTEN STOECK et al. MOLECULAR ECOLOGY
- Improving indicator species analysis by combining groups of sites
- (2010) Miquel De Cáceres et al. OIKOS
- Universal sample preparation method for proteome analysis
- (2009) Jacek R Wiśniewski et al. NATURE METHODS
- Escherichia coli MazF Leads to the Simultaneous Selective Synthesis of Both “Death Proteins” and “Survival Proteins”
- (2009) Shahar Amitai et al. PLoS Genetics
- Dethiobacter alkaliphilus gen. nov. sp. nov., and Desulfurivibrio alkaliphilus gen. nov. sp. nov.: two novel representatives of reductive sulfur cycle from soda lakes
- (2008) D. Yu. Sorokin et al. EXTREMOPHILES
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