Energy limitation of cyanophage development: implications for marine carbon cycling

Energetic cost of building a virus

(2017) Gita Mahmoudabadi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diel cycling and long-term persistence of viruses in the ocean’s euphotic zone

(2017) Frank O. Aylward et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Viruses Inhibit CO 2 Fixation in the Most Abundant Phototrophs on Earth

(2016) Richard J. Puxty et al.   CURRENT BIOLOGY

Physiological and ecological drivers of early spring blooms of a coastal phytoplankter

(2016) Kristen R. Hunter-Cevera et al.   SCIENCE

The genomic content and context of auxiliary metabolic genes in marine cyanomyoviruses

(2016) Lisa T. Crummett et al.   VIROLOGY

Spontaneous Deletion of an “ORFanage” Region Facilitates Host Adaptation in a “Photosynthetic” Cyanophage

(2015) Richard J. Puxty et al.   PLoS One

Microbial community transcriptional networks are conserved in three domains at ocean basin scales

(2015) Frank O. Aylward et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Prochlorococcus: the structure and function of collective diversity

(2014) Steven J. Biller et al.   NATURE REVIEWS MICROBIOLOGY

Shedding new light on viral photosynthesis

(2014) Richard J. Puxty et al.   PHOTOSYNTHESIS RESEARCH

Multispecies diel transcriptional oscillations in open ocean heterotrophic bacterial assemblages

(2014) E. A. Ottesen et al.   SCIENCE

Marine Viruses Exploit Their Host's Two-Component Regulatory System in Response to Resource Limitation

(2012) Qinglu Zeng et al.   CURRENT BIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Positive Regulation of psbA Gene Expression by cis-Encoded Antisense RNAs in Synechocystis sp. PCC 6803

(2012) I. Sakurai et al.   PLANT PHYSIOLOGY

Strategies for psbA gene expression in cyanobacteria, green algae and higher plants: From transcription to PSII repair

(2011) Paula Mulo et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

cis-Antisense RNA, Another Level of Gene Regulation in Bacteria

(2011) J. Georg et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å

(2011) Yasufumi Umena et al.   NATURE

Phage auxiliary metabolic genes and the redirection of cyanobacterial host carbon metabolism

(2011) L. R. Thompson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

An antisense RNA in a lytic cyanophage links psbA to a gene encoding a homing endonuclease

(2010) Andrew D Millard et al.   ISME Journal

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

A Free-Standing Homing Endonuclease Targets an Intron Insertion Site in the psbA Gene of Cyanophages

(2009) Qinglu Zeng et al.   CURRENT BIOLOGY

Carrying photosynthesis genes increases ecological fitness of cyanophagein silico

(2009) Ferdi L. Hellweger   ENVIRONMENTAL MICROBIOLOGY

Simultaneous Inactivation of Sigma Factors B and D Interferes with Light Acclimation of the Cyanobacterium Synechocystis sp. Strain PCC 6803

(2009) M. Pollari et al.   JOURNAL OF BACTERIOLOGY

Ecological Genomics of Marine Picocyanobacteria

(2009) D. J. Scanlan et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

Function and evolution of the psbA gene family in marine Synechococcus: Synechococcus sp. WH7803 as a case study

(2008) Laurence Garczarek et al.   ISME Journal

Dissection of the Bacteriophage T4 Late Promoter Complex

(2008) Sergei Nechaev et al.   JOURNAL OF MOLECULAR BIOLOGY

A proteomic approach to the identification of the major virion structural proteins of the marine cyanomyovirus S-PM2

(2008) M. R. J. Clokie et al.   MICROBIOLOGY-SGM

Modeling the Fitness Consequences of a Cyanophage-Encoded Photosynthesis Gene

(2008) Jason G. Bragg et al.   PLoS One