Comparative mass spectrometry-based metabolomics strategies for the investigation of microbial secondary metabolites
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Comparative mass spectrometry-based metabolomics strategies for the investigation of microbial secondary metabolites
Authors
Keywords
-
Journal
NATURAL PRODUCT REPORTS
Volume 34, Issue 1, Pages 6-24
Publisher
Royal Society of Chemistry (RSC)
Online
2016-09-08
DOI
10.1039/c6np00048g
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- The Chemical Ecology of Predatory Soil Bacteria
- (2016) Brandon L. Findlay ACS Chemical Biology
- Integration of Molecular Networking and In-Silico MS/MS Fragmentation for Natural Products Dereplication
- (2016) Pierre-Marie Allard et al. ANALYTICAL CHEMISTRY
- Advanced Multidimensional Separations in Mass Spectrometry: Navigating the Big Data Deluge
- (2016) Jody C. May et al. Annual Review of Analytical Chemistry
- A roadmap for the XCMS family of software solutions in metabolomics
- (2016) Nathaniel G Mahieu et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- Linking Biosynthetic Gene Clusters to their Metabolites via Pathway- Targeted Molecular Networking
- (2016) Eric P. Trautman et al. CURRENT TOPICS IN MEDICINAL CHEMISTRY
- Biochemometrics for Natural Products Research: Comparison of Data Analysis Approaches and Application to Identification of Bioactive Compounds
- (2016) Joshua J. Kellogg et al. JOURNAL OF NATURAL PRODUCTS
- Natural Products as Sources of New Drugs from 1981 to 2014
- (2016) David J. Newman et al. JOURNAL OF NATURAL PRODUCTS
- Multicomponent Analysis of the Differential Induction of Secondary Metabolite Profiles in Fungal Endophytes
- (2016) Víctor González-Menéndez et al. MOLECULES
- Prospecting for new bacterial metabolites: a glossary of approaches for inducing, activating and upregulating the biosynthesis of bacterial cryptic or silent natural products
- (2016) Joseph Scott Zarins-Tutt et al. NATURAL PRODUCT REPORTS
- The evolution of genome mining in microbes – a review
- (2016) Nadine Ziemert et al. NATURAL PRODUCT REPORTS
- Strategies for target identification of antimicrobial natural products
- (2016) Maya A. Farha et al. NATURAL PRODUCT REPORTS
- New tools for reconstruction and heterologous expression of natural product biosynthetic gene clusters
- (2016) Yunzi Luo et al. NATURAL PRODUCT REPORTS
- Assembly and clustering of natural antibiotics guides target identification
- (2016) Chad W Johnston et al. Nature Chemical Biology
- Liquid chromatography–high-resolution mass spectrometry-based cell metabolomics: Experimental design, recommendations, and applications
- (2016) Blandine Madji Hounoum et al. TRAC-TRENDS IN ANALYTICAL CHEMISTRY
- Mapping Microbial Response Metabolomes for Induced Natural Product Discovery
- (2015) Dagmara K. Derewacz et al. ACS Chemical Biology
- Large-Scale Metabolomics Reveals a Complex Response of Aspergillus nidulans to Epigenetic Perturbation
- (2015) Jessica C. Albright et al. ACS Chemical Biology
- Identification of Thiotetronic Acid Antibiotic Biosynthetic Pathways by Target-directed Genome Mining
- (2015) Xiaoyu Tang et al. ACS Chemical Biology
- Combining Stable Isotope Labeling and Molecular Networking for Biosynthetic Pathway Characterization
- (2015) Andreas Klitgaard et al. ANALYTICAL CHEMISTRY
- Ion Mobility-Mass Spectrometry: Time-Dispersive Instrumentation
- (2015) Jody C. May et al. ANALYTICAL CHEMISTRY
- Lincomycin at Subinhibitory Concentrations Potentiates Secondary Metabolite Production by Streptomyces spp.
- (2015) Yu Imai et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Deconvolving molecular signatures of interactions between microbial colonies
- (2015) Y.-C. Harn et al. BIOINFORMATICS
- Elicitation of secondary metabolism in actinomycetes
- (2015) Usama Ramadan Abdelmohsen et al. BIOTECHNOLOGY ADVANCES
- IPO: a tool for automated optimization of XCMS parameters
- (2015) Gunnar Libiseller et al. BMC BIOINFORMATICS
- Engineered biosynthesis of natural products in heterologous hosts
- (2015) Yunzi Luo et al. CHEMICAL SOCIETY REVIEWS
- Structuring Microbial Metabolic Responses to Multiplexed Stimuli via Self-Organizing Metabolomics Maps
- (2015) Cody R. Goodwin et al. CHEMISTRY & BIOLOGY
- Molecular Networking and Pattern-Based Genome Mining Improves Discovery of Biosynthetic Gene Clusters and their Products from Salinispora Species
- (2015) Katherine R. Duncan et al. CHEMISTRY & BIOLOGY
- Changes in secondary metabolic profiles of Microcystis aeruginosa strains in response to intraspecific interactions
- (2015) Enora Briand et al. ENVIRONMENTAL MICROBIOLOGY
- Current approaches and challenges for the metabolite profiling of complex natural extracts
- (2015) Jean-Luc Wolfender et al. JOURNAL OF CHROMATOGRAPHY A
- Combining Mass Spectrometric Metabolic Profiling with Genomic Analysis: A Powerful Approach for Discovering Natural Products from Cyanobacteria
- (2015) Karin Kleigrewe et al. JOURNAL OF NATURAL PRODUCTS
- Metabolomics-Driven Discovery of a Prenylated Isatin Antibiotic Produced by Streptomyces Species MBT28
- (2015) Changsheng Wu et al. JOURNAL OF NATURAL PRODUCTS
- The Sound of Silence: Activating Silent Biosynthetic Gene Clusters in Marine Microorganisms
- (2015) F. Reen et al. Marine Drugs
- Biological targets and mechanisms of action of natural products from marine cyanobacteria
- (2015) Lilibeth A. Salvador-Reyes et al. NATURAL PRODUCT REPORTS
- Dereplication: racing to speed up the natural products discovery process
- (2015) Susana P. Gaudêncio et al. NATURAL PRODUCT REPORTS
- Computational approaches to natural product discovery
- (2015) Marnix H Medema et al. Nature Chemical Biology
- Correlating chemical sensitivity and basal gene expression reveals mechanism of action
- (2015) Matthew G Rees et al. Nature Chemical Biology
- Reinvigorating natural product combinatorial biosynthesis with synthetic biology
- (2015) Eunji Kim et al. Nature Chemical Biology
- The colibactin warhead crosslinks DNA
- (2015) Maria I. Vizcaino et al. Nature Chemistry
- Hunting microbial metabolites
- (2015) Eric W. Schmidt Nature Chemistry
- Discovery of microbial natural products by activation of silent biosynthetic gene clusters
- (2015) Peter J. Rutledge et al. NATURE REVIEWS MICROBIOLOGY
- MetaboAnalyst 3.0—making metabolomics more meaningful
- (2015) Jianguo Xia et al. NUCLEIC ACIDS RESEARCH
- antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters
- (2015) Tilmann Weber et al. NUCLEIC ACIDS RESEARCH
- Discovery of phosphonic acid natural products by mining the genomes of 10,000 actinomycetes
- (2015) Kou-San Ju et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Integration of high-content screening and untargeted metabolomics for comprehensive functional annotation of natural product libraries
- (2015) Kenji L. Kurita et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Searching molecular structure databases with tandem mass spectra using CSI:FingerID
- (2015) Kai Dührkop et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Antibiotic efficacy is linked to bacterial cellular respiration
- (2015) Michael A. Lobritz et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Thiopeptide antibiotics stimulate biofilm formation inBacillus subtilis
- (2015) Rachel Bleich et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Plant pathogenic anaerobic bacteria use aromatic polyketides to access aerobic territory
- (2015) G. Shabuer et al. SCIENCE
- Using fragmentation trees and mass spectral trees for identifying unknown compounds in metabolomics
- (2015) Arpana Vaniya et al. TRAC-TRENDS IN ANALYTICAL CHEMISTRY
- Prioritization of Natural Extracts by LC–MS-PCA for the Identification of New Photosensitizers for Photodynamic Therapy
- (2014) Norazwana Samat et al. ANALYTICAL CHEMISTRY
- Phenotypic Mapping of Metabolic Profiles Using Self-Organizing Maps of High-Dimensional Mass Spectrometry Data
- (2014) Cody R. Goodwin et al. ANALYTICAL CHEMISTRY
- Interactive XCMS Online: Simplifying Advanced Metabolomic Data Processing and Subsequent Statistical Analyses
- (2014) Harsha Gowda et al. ANALYTICAL CHEMISTRY
- Ion Mobility–Mass Spectrometry of Lasso Peptides: Signature of a Rotaxane Topology
- (2014) Kevin Jeanne Dit Fouque et al. ANALYTICAL CHEMISTRY
- Principal component analysis
- (2014) Rasmus Bro et al. Analytical Methods
- Metabolite identification through multiple kernel learning on fragmentation trees
- (2014) Huibin Shen et al. BIOINFORMATICS
- A simple peak detection and label-free quantitation algorithm for chromatography-mass spectrometry
- (2014) Ken Aoshima et al. BMC BIOINFORMATICS
- A Systematic Analysis of Biosynthetic Gene Clusters in the Human Microbiome Reveals a Common Family of Antibiotics
- (2014) Mohamed S. Donia et al. CELL
- Specialized Metabolites from the Microbiome in Health and Disease
- (2014) Gil Sharon et al. Cell Metabolism
- N-Terminal ArgD Peptides from the Classical Staphylococcus aureus Agr System Have Cytotoxic and Proinflammatory Activities
- (2014) David J. Gonzalez et al. CHEMISTRY & BIOLOGY
- Getting the right answers: understanding metabolomics challenges
- (2014) Stephan Beisken et al. EXPERT REVIEW OF MOLECULAR DIAGNOSTICS
- Distance Geometry Protocol to Generate Conformations of Natural Products to Structurally Interpret Ion Mobility-Mass Spectrometry Collision Cross Sections
- (2014) Sarah M. Stow et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Wavelet-Based Peak Detection and a New Charge Inference Procedure for MS/MS Implemented in ProteoWizard’s msConvert
- (2014) William R. French et al. JOURNAL OF PROTEOME RESEARCH
- MALDI imaging mass spectrometry: Spatial molecular analysis to enable a new age of discovery
- (2014) Megan M. Gessel et al. Journal of Proteomics
- Comparative Metabolomics and Structural Characterizations Illuminate Colibactin Pathway-Dependent Small Molecules
- (2014) Maria I. Vizcaino et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Metabolomic Tools for Secondary Metabolite Discovery from Marine Microbial Symbionts
- (2014) Lynsey Macintyre et al. Marine Drugs
- Accurate Dereplication of Bioactive Secondary Metabolites from Marine-Derived Fungi by UHPLC-DAD-QTOFMS and a MS/HRMS Library
- (2014) Sara Kildgaard et al. Marine Drugs
- Phenol Soluble Modulin (PSM) Variants of Community-Associated Methicillin-ResistantStaphylococcus aureus(MRSA) Captured Using Mass Spectrometry-Based Molecular Networking
- (2014) David J. Gonzalez et al. MOLECULAR & CELLULAR PROTEOMICS
- New kids on the block: novel informatics methods for natural product discovery
- (2014) Franziska Hufsky et al. NATURAL PRODUCT REPORTS
- Ion sources for mass spectrometric identification and imaging of molecular species
- (2014) Chhavi Bhardwaj et al. NATURAL PRODUCT REPORTS
- Secondary metabolomics: the impact of mass spectrometry-based approaches on the discovery and characterization of microbial natural products
- (2014) Daniel Krug et al. NATURAL PRODUCT REPORTS
- Bringing microbial interactions to light using imaging mass spectrometry
- (2014) Chao-Jen Shih et al. NATURAL PRODUCT REPORTS
- Emerging capabilities of mass spectrometry for natural products
- (2014) Alan K. Jarmusch et al. NATURAL PRODUCT REPORTS
- Mass spectrometry of natural products: current, emerging and future technologies
- (2014) Amina Bouslimani et al. NATURAL PRODUCT REPORTS
- The power of ion mobility-mass spectrometry for structural characterization and the study of conformational dynamics
- (2014) Francesco Lanucara et al. Nature Chemistry
- Retention time prediction for dereplication of natural products (CxHyOz) in LC–MS metabolite profiling
- (2014) Philippe J. Eugster et al. PHYTOCHEMISTRY
- Angucyclines as signals modulate the behaviors of Streptomyces coelicolor
- (2014) W. Wang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Targeted Capture and Heterologous Expression of the Pseudoalteromonas Alterochromide Gene Cluster in Escherichia coli Represents a Promising Natural Product Exploratory Platform
- (2014) Avena C. Ross et al. ACS Synthetic Biology
- Benznidazole Biotransformation and Multiple Targets in Trypanosoma cruzi Revealed by Metabolomics
- (2014) Andrea Trochine et al. PLoS Neglected Tropical Diseases
- Genetic Basis for the Biosynthesis of the Pharmaceutically Important Class of Epoxyketone Proteasome Inhibitors
- (2013) Michelle Schorn et al. ACS Chemical Biology
- Chemical dereplication of marine actinomycetes by liquid chromatography–high resolution mass spectrometry profiling and statistical analysis
- (2013) David Forner et al. ANALYTICA CHIMICA ACTA
- Image-Based 384-Well High-Throughput Screening Method for the Discovery of Skyllamycins A to C as Biofilm Inhibitors and Inducers of Biofilm Detachment in Pseudomonas aeruginosa
- (2013) Gabriel Navarro et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Chromatographic peak alignment using derivative dynamic time warping
- (2013) Christopher Bork et al. BIOTECHNOLOGY PROGRESS
- New Advances in Separation Science for Metabolomics: Resolving Chemical Diversity in a Post-Genomic Era
- (2013) Naomi L. Kuehnbaum et al. CHEMICAL REVIEWS
- “Function-First” Lead Discovery: Mode of Action Profiling of Natural Product Libraries Using Image-Based Screening
- (2013) Christopher J. Schulze et al. CHEMISTRY & BIOLOGY
- Liquid chromatography–mass spectrometry in metabolomics research: Mass analyzers in ultra high pressure liquid chromatography coupling
- (2013) Sara Forcisi et al. JOURNAL OF CHROMATOGRAPHY A
- Challenges and triumphs to genomics-based natural product discovery
- (2013) Paul R. Jensen et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Merging chemical ecology with bacterial genome mining for secondary metabolite discovery
- (2013) Maria I. Vizcaino et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- High-Resolution MS, MS/MS, and UV Database of Fungal Secondary Metabolites as a Dereplication Protocol for Bioactive Natural Products
- (2013) Tamam El-Elimat et al. JOURNAL OF NATURAL PRODUCTS
- Molecular Networking as a Dereplication Strategy
- (2013) Jane Y. Yang et al. JOURNAL OF NATURAL PRODUCTS
- Discoipyrroles A–D: Isolation, Structure Determination, and Synthesis of Potent Migration Inhibitors from Bacillus hunanensis
- (2013) Youcai Hu et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Large-scale cytological profiling for functional analysis of bioactive compounds
- (2013) Marcos H. Woehrmann et al. Molecular BioSystems
- Mechanism of action-based classification of antibiotics using high-content bacterial image analysis
- (2013) Kelly C. Peach et al. Molecular BioSystems
- Natural product isolation – how to get from biological material to pure compounds
- (2013) Franz Bucar et al. NATURAL PRODUCT REPORTS
- A global approach to analysis and interpretation of metabolic data for plant natural product discovery
- (2013) Manhoi Hur et al. NATURAL PRODUCT REPORTS
- Recent advances in the heterologous expression of microbial natural product biosynthetic pathways
- (2013) Sarah E. Ongley et al. NATURAL PRODUCT REPORTS
- Liquid chromatography quadrupole time-of-flight mass spectrometry characterization of metabolites guided by the METLIN database
- (2013) Zheng-Jiang Zhu et al. Nature Protocols
- Antimicrobial drug resistance affects broad changes in metabolomic phenotype in addition to secondary metabolism
- (2013) D. K. Derewacz et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- MS/MS networking guided analysis of molecule and gene cluster families
- (2013) D. D. Nguyen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Glycogenomics as a mass spectrometry-guided genome-mining method for microbial glycosylated molecules
- (2013) R. D. Kersten et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Using Functional Signature Ontology (FUSION) to Identify Mechanisms of Action for Natural Products
- (2013) M. B. Potts et al. Science Signaling
- Interspecies Interactions Stimulate Diversification of the Streptomyces coelicolor Secreted Metabolome
- (2013) M. F. Traxler et al. mBio
- Microbial Strain Prioritization Using Metabolomics Tools for the Discovery of Natural Products
- (2012) Yanpeng Hou et al. ANALYTICAL CHEMISTRY
- XCMS Online: A Web-Based Platform to Process Untargeted Metabolomic Data
- (2012) Ralf Tautenhahn et al. ANALYTICAL CHEMISTRY
- A View from Above: Cloud Plots to Visualize Global Metabolomic Data
- (2012) Gary J. Patti et al. ANALYTICAL CHEMISTRY
- New strategies for drug discovery: activation of silent or weakly expressed microbial gene clusters
- (2012) Kozo Ochi et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Development of Antibiotic Activity Profile Screening for the Classification and Discovery of Natural Product Antibiotics
- (2012) Weng Ruh Wong et al. CHEMISTRY & BIOLOGY
- Thoughts and facts about antibiotics: Where we are now and where we are heading
- (2012) János Bérdy JOURNAL OF ANTIBIOTICS
- Primer on Agar-Based Microbial Imaging Mass Spectrometry
- (2012) J. Y. Yang et al. JOURNAL OF BACTERIOLOGY
- Structural Mass Spectrometry: Rapid Methods for Separation and Analysis of Peptide Natural Products
- (2012) Cody R. Goodwin et al. JOURNAL OF NATURAL PRODUCTS
- Bromophycoic Acids: Bioactive Natural Products from a Fijian Red Alga Callophycus sp.
- (2012) Margaret E. Teasdale et al. JOURNAL OF ORGANIC CHEMISTRY
- Regulation of fungal secondary metabolism
- (2012) Axel A. Brakhage NATURE REVIEWS MICROBIOLOGY
- Metabolomics: the apogee of the omics trilogy
- (2012) Gary J. Patti et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Mass spectral molecular networking of living microbial colonies
- (2012) J. Watrous et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Interkingdom metabolic transformations captured by microbial imaging mass spectrometry
- (2012) W. J. Moree et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Interactions Between the Microbiota and the Immune System
- (2012) L. V. Hooper et al. SCIENCE
- Untargeted Metabolomics Reveals a Lack Of Synergy between Nifurtimox and Eflornithine against Trypanosoma brucei
- (2012) Isabel M. Vincent et al. PLoS Neglected Tropical Diseases
- Predicting the in Vivo Mechanism of Action for Drug Leads Using NMR Metabolomics
- (2011) Steven Halouska et al. ACS Chemical Biology
- Myxoprincomide: A Natural Product from Myxococcus xanthus Discovered by Comprehensive Analysis of the Secondary Metabolome
- (2011) Niña Socorro Cortina et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- SIMA: Simultaneous Multiple Alignment of LC/MS Peak Lists
- (2011) Björn Voss et al. BIOINFORMATICS
- Ion mobility mass spectrometry enables the efficient detection and identification of halogenated natural products from cyanobacteria with minimal sample preparation
- (2011) Eduardo Esquenazi et al. BIOORGANIC & MEDICINAL CHEMISTRY
- Accessing the Hidden Majority of Marine Natural Products through Metagenomics
- (2011) Mohamed S. Donia et al. CHEMBIOCHEM
- Dereplication of Microbial Natural Products by LC-DAD-TOFMS
- (2011) Kristian F. Nielsen et al. JOURNAL OF NATURAL PRODUCTS
- Imaging Mass Spectrometry and Genome Mining via Short Sequence Tagging Identified the Anti-Infective Agent Arylomycin inStreptomyces roseosporus
- (2011) Wei-Ting Liu et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Aligning extracted LC-MS peak lists via density maximization
- (2011) Venura Perera et al. Metabolomics
- Microbial competition between Bacillus subtilis and Staphylococcus aureus monitored by imaging mass spectrometry
- (2011) D. J. Gonzalez et al. MICROBIOLOGY-SGM
- LC-MS-based metabolomics
- (2011) Bin Zhou et al. Molecular BioSystems
- A mass spectrometry–guided genome mining approach for natural product peptidogenomics
- (2011) Roland D Kersten et al. Nature Chemical Biology
- Imaging mass spectrometry in microbiology
- (2011) Jeramie D. Watrous et al. NATURE REVIEWS MICROBIOLOGY
- antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences
- (2011) Marnix H. Medema et al. NUCLEIC ACIDS RESEARCH
- Temporal dynamics of natural product biosynthesis in marine cyanobacteria
- (2011) E. Esquenazi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Multivariate methods in metabolomics – from pre-processing to dimension reduction and statistical analysis
- (2011) Kristian Hovde Liland TRAC-TRENDS IN ANALYTICAL CHEMISTRY
- Data-processing strategies for metabolomics studies
- (2011) Margriet M.W.B. Hendriks et al. TRAC-TRENDS IN ANALYTICAL CHEMISTRY
- Computational mass spectrometry for metabolomics: Identification of metabolites and small molecules
- (2010) Steffen Neumann et al. ANALYTICAL AND BIOANALYTICAL CHEMISTRY
- MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
- (2010) Tomáš Pluskal et al. BMC BIOINFORMATICS
- Halogen Atoms in the Modern Medicinal Chemistry: Hints for the Drug Design
- (2010) Marcelo Hernandes et al. CURRENT DRUG TARGETS
- NMR-spectroscopic analysis of mixtures: from structure to function
- (2010) Ry R Forseth et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- Rare earth elements activate the secondary metabolite–biosynthetic gene clusters in Streptomyces coelicolor A3(2)
- (2010) Yukinori Tanaka et al. JOURNAL OF ANTIBIOTICS
- The evolution of partial least squares models and related chemometric approaches in metabonomics and metabolic phenotyping
- (2010) Judith M. Fonville et al. JOURNAL OF CHEMOMETRICS
- Current approaches to exploit actinomycetes as a source of novel natural products
- (2010) Olga Genilloud et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- MassBank: a public repository for sharing mass spectral data for life sciences
- (2010) Hisayuki Horai et al. JOURNAL OF MASS SPECTROMETRY
- Explorative Solid-Phase Extraction (E-SPE) for Accelerated Microbial Natural Product Discovery, Dereplication, and Purification
- (2010) Maria Månsson et al. JOURNAL OF NATURAL PRODUCTS
- Natural Products Version 2.0: Connecting Genes to Molecules
- (2010) Christopher T. Walsh et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- mzML—a Community Standard for Mass Spectrometry Data
- (2010) Lennart Martens et al. MOLECULAR & CELLULAR PROTEOMICS
- Methods and options for the heterologous production of complex natural products
- (2010) Haoran Zhang et al. NATURAL PRODUCT REPORTS
- Symbiotic streptomycetes provide antibiotic combination prophylaxis for wasp offspring
- (2010) Johannes Kroiss et al. Nature Chemical Biology
- Recognition of peptidoglycan from the microbiota by Nod1 enhances systemic innate immunity
- (2010) Thomas B Clarke et al. NATURE MEDICINE
- Isolation and characterisation of amphotericin B analogues and truncated polyketide intermediates produced by genetic engineering of Streptomyces nodosus
- (2010) Barry Murphy et al. ORGANIC & BIOMOLECULAR CHEMISTRY
- Quorum-Sensing-Regulated Bactobolin Production byBurkholderia thailandensisE264
- (2010) Mohammad R. Seyedsayamdost et al. ORGANIC LETTERS
- Genome-minimized Streptomyces host for the heterologous expression of secondary metabolism
- (2010) M. Komatsu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- MetAlign: Interface-Driven, Versatile Metabolomics Tool for Hyphenated Full-Scan Mass Spectrometry Data Preprocessing
- (2009) Arjen Lommen ANALYTICAL CHEMISTRY
- Interspecies Chemical Communication in Bacterial Development
- (2009) Paul D. Straight et al. Annual Review of Microbiology
- Antibiotic Overproduction by rpsL and rsmG Mutants of Various Actinomycetes
- (2009) Y. Tanaka et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Retention time alignment algorithms for LC/MS data must consider non-linear shifts
- (2009) Katharina Podwojski et al. BIOINFORMATICS
- Automated genome mining for natural products
- (2009) Michael HT Li et al. BMC BIOINFORMATICS
- Postulating Modes of Action of Compounds with Antimicrobial Activities through Metabolomics Analysis
- (2009) Yi Liu et al. CHROMATOGRAPHIA
- Pedein A and B: Production, Isolation, Structure Elucidation and Biological Properties of New Antifungal Cyclopeptides from Chondromyces pediculatus (Myxobacteria)
- (2009) Brigitte Kunze et al. JOURNAL OF ANTIBIOTICS
- Palmyramide A, a Cyclic Depsipeptide from a Palmyra Atoll Collection of the Marine CyanobacteriumLyngbya majuscula†
- (2009) Masatoshi Taniguchi et al. JOURNAL OF NATURAL PRODUCTS
- CE50: Quantifying collision induced dissociation energy for small molecule characterization and identification
- (2009) Tzipporah M. Kertesz et al. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
- Antibacterial discovery in actinomycetes strains with mutations in RNA polymerase or ribosomal protein S12
- (2009) Takeshi Hosaka et al. NATURE BIOTECHNOLOGY
- Translating metabolic exchange with imaging mass spectrometry
- (2009) Yu-Liang Yang et al. Nature Chemical Biology
- Triggering cryptic natural product biosynthesis in microorganisms
- (2009) Kirstin Scherlach et al. ORGANIC & BIOMOLECULAR CHEMISTRY
- Desorption electrospray ionization mass spectrometry reveals surface-mediated antifungal chemical defense of a tropical seaweed
- (2009) A. L. Lane et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Probing marine natural product defenses with DESI-imaging mass spectrometry
- (2009) E. Esquenazi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Efficient mining of myxobacterial metabolite profiles enabled by liquid chromatography–electrospray ionisation-time-of-flight mass spectrometry and compound-based principal component analysis
- (2008) Daniel Krug et al. ANALYTICA CHIMICA ACTA
- XCMS2: Processing Tandem Mass Spectrometry Data for Metabolite Identification and Structural Characterization
- (2008) H. P. Benton et al. ANALYTICAL CHEMISTRY
- Subsurface Biomolecular Imaging ofStreptomycescoelicolorUsing Secondary Ion Mass Spectrometry
- (2008) Seetharaman Vaidyanathan et al. ANALYTICAL CHEMISTRY
- Rules of Engagement: Interspecies Interactions that Regulate Microbial Communities
- (2008) Ainslie E.F. Little et al. Annual Review of Microbiology
- Dramatic Activation of Antibiotic Production in Streptomyces coelicolor by Cumulative Drug Resistance Mutations
- (2008) G. Wang et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Discovering the Hidden Secondary Metabolome of Myxococcus xanthus: a Study of Intraspecific Diversity
- (2008) D. Krug et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- TOF-SIMS investigation of Streptomyces coelicolor, a mycelial bacterium
- (2008) Seetharaman Vaidyanathan et al. APPLIED SURFACE SCIENCE
- Recent advances in solid-state fermentation
- (2008) Reeta Rani Singhania et al. BIOCHEMICAL ENGINEERING JOURNAL
- SIRIUS: decomposing isotope patterns for metabolite identification†
- (2008) Sebastian Böcker et al. BIOINFORMATICS
- ProteoWizard: open source software for rapid proteomics tools development
- (2008) Darren Kessner et al. BIOINFORMATICS
- OpenMS – An open-source software framework for mass spectrometry
- (2008) Marc Sturm et al. BMC BIOINFORMATICS
- Critical assessment of alignment procedures for LC-MS proteomics and metabolomics measurements
- (2008) Eva Lange et al. BMC BIOINFORMATICS
- Highly sensitive feature detection for high resolution LC/MS
- (2008) Ralf Tautenhahn et al. BMC BIOINFORMATICS
- Lynamicins A−E, Chlorinated Bisindole Pyrrole Antibiotics from a Novel Marine Actinomycete†
- (2008) Katherine A. McArthur et al. JOURNAL OF NATURAL PRODUCTS
- Moromycins A and B, Isolation and Structure Elucidation ofC-Glycosylangucycline-Type Antibiotics fromStreptomycessp. KY002
- (2008) Mohamed S. Abdelfattah et al. JOURNAL OF NATURAL PRODUCTS
- Diffusible signals and interspecies communication in bacteria
- (2008) R. P. Ryan et al. MICROBIOLOGY-SGM
- Visualizing the spatial distribution of secondary metabolites produced by marine cyanobacteria and sponges via MALDI-TOF imaging
- (2008) Eduardo Esquenazi et al. Molecular BioSystems
- Natural product isolation
- (2008) Otto Sticher NATURAL PRODUCT REPORTS
- Methods for isolation, purification and structural elucidation of bioactive secondary metabolites from marine invertebrates
- (2008) Sherif S Ebada et al. Nature Protocols
- Biosynthetic origin of natural products isolated from marine microorganism-invertebrate assemblages
- (2008) T. L. Simmons et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mass measurement accuracy comparisons between a double-focusing magnetic sector and a time-of-flight mass analyzer
- (2008) Michael S. Bereman et al. RAPID COMMUNICATIONS IN MASS SPECTROMETRY
- Visualization of GC/TOF-MS-Based Metabolomics Data for Identification of Biochemically Interesting Compounds Using OPLS Class Models
- (2007) Susanne Wiklund et al. ANALYTICAL CHEMISTRY
- Surface-induced dissociation of small molecules, peptides, and non-covalent protein complexes
- (2007) Vicki H. Wysocki et al. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search