Comparative mass spectrometry-based metabolomics strategies for the investigation of microbial secondary metabolites
出版年份 2017 全文链接
标题
Comparative mass spectrometry-based metabolomics strategies for the investigation of microbial secondary metabolites
作者
关键词
-
出版物
NATURAL PRODUCT REPORTS
Volume 34, Issue 1, Pages 6-24
出版商
Royal Society of Chemistry (RSC)
发表日期
2016-09-08
DOI
10.1039/c6np00048g
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- The Chemical Ecology of Predatory Soil Bacteria
- (2016) Brandon L. Findlay ACS Chemical Biology
- Integration of Molecular Networking and In-Silico MS/MS Fragmentation for Natural Products Dereplication
- (2016) Pierre-Marie Allard et al. ANALYTICAL CHEMISTRY
- Advanced Multidimensional Separations in Mass Spectrometry: Navigating the Big Data Deluge
- (2016) Jody C. May et al. Annual Review of Analytical Chemistry
- A roadmap for the XCMS family of software solutions in metabolomics
- (2016) Nathaniel G Mahieu et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- Linking Biosynthetic Gene Clusters to their Metabolites via Pathway- Targeted Molecular Networking
- (2016) Eric P. Trautman et al. CURRENT TOPICS IN MEDICINAL CHEMISTRY
- Biochemometrics for Natural Products Research: Comparison of Data Analysis Approaches and Application to Identification of Bioactive Compounds
- (2016) Joshua J. Kellogg et al. JOURNAL OF NATURAL PRODUCTS
- Natural Products as Sources of New Drugs from 1981 to 2014
- (2016) David J. Newman et al. JOURNAL OF NATURAL PRODUCTS
- Multicomponent Analysis of the Differential Induction of Secondary Metabolite Profiles in Fungal Endophytes
- (2016) Víctor González-Menéndez et al. MOLECULES
- Prospecting for new bacterial metabolites: a glossary of approaches for inducing, activating and upregulating the biosynthesis of bacterial cryptic or silent natural products
- (2016) Joseph Scott Zarins-Tutt et al. NATURAL PRODUCT REPORTS
- The evolution of genome mining in microbes – a review
- (2016) Nadine Ziemert et al. NATURAL PRODUCT REPORTS
- Strategies for target identification of antimicrobial natural products
- (2016) Maya A. Farha et al. NATURAL PRODUCT REPORTS
- New tools for reconstruction and heterologous expression of natural product biosynthetic gene clusters
- (2016) Yunzi Luo et al. NATURAL PRODUCT REPORTS
- Assembly and clustering of natural antibiotics guides target identification
- (2016) Chad W Johnston et al. Nature Chemical Biology
- Liquid chromatography–high-resolution mass spectrometry-based cell metabolomics: Experimental design, recommendations, and applications
- (2016) Blandine Madji Hounoum et al. TRAC-TRENDS IN ANALYTICAL CHEMISTRY
- Mapping Microbial Response Metabolomes for Induced Natural Product Discovery
- (2015) Dagmara K. Derewacz et al. ACS Chemical Biology
- Large-Scale Metabolomics Reveals a Complex Response of Aspergillus nidulans to Epigenetic Perturbation
- (2015) Jessica C. Albright et al. ACS Chemical Biology
- Identification of Thiotetronic Acid Antibiotic Biosynthetic Pathways by Target-directed Genome Mining
- (2015) Xiaoyu Tang et al. ACS Chemical Biology
- Combining Stable Isotope Labeling and Molecular Networking for Biosynthetic Pathway Characterization
- (2015) Andreas Klitgaard et al. ANALYTICAL CHEMISTRY
- Ion Mobility-Mass Spectrometry: Time-Dispersive Instrumentation
- (2015) Jody C. May et al. ANALYTICAL CHEMISTRY
- Lincomycin at Subinhibitory Concentrations Potentiates Secondary Metabolite Production by Streptomyces spp.
- (2015) Yu Imai et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Deconvolving molecular signatures of interactions between microbial colonies
- (2015) Y.-C. Harn et al. BIOINFORMATICS
- Elicitation of secondary metabolism in actinomycetes
- (2015) Usama Ramadan Abdelmohsen et al. BIOTECHNOLOGY ADVANCES
- IPO: a tool for automated optimization of XCMS parameters
- (2015) Gunnar Libiseller et al. BMC BIOINFORMATICS
- Engineered biosynthesis of natural products in heterologous hosts
- (2015) Yunzi Luo et al. CHEMICAL SOCIETY REVIEWS
- Structuring Microbial Metabolic Responses to Multiplexed Stimuli via Self-Organizing Metabolomics Maps
- (2015) Cody R. Goodwin et al. CHEMISTRY & BIOLOGY
- Molecular Networking and Pattern-Based Genome Mining Improves Discovery of Biosynthetic Gene Clusters and their Products from Salinispora Species
- (2015) Katherine R. Duncan et al. CHEMISTRY & BIOLOGY
- Changes in secondary metabolic profiles of Microcystis aeruginosa strains in response to intraspecific interactions
- (2015) Enora Briand et al. ENVIRONMENTAL MICROBIOLOGY
- Current approaches and challenges for the metabolite profiling of complex natural extracts
- (2015) Jean-Luc Wolfender et al. JOURNAL OF CHROMATOGRAPHY A
- Combining Mass Spectrometric Metabolic Profiling with Genomic Analysis: A Powerful Approach for Discovering Natural Products from Cyanobacteria
- (2015) Karin Kleigrewe et al. JOURNAL OF NATURAL PRODUCTS
- Metabolomics-Driven Discovery of a Prenylated Isatin Antibiotic Produced by Streptomyces Species MBT28
- (2015) Changsheng Wu et al. JOURNAL OF NATURAL PRODUCTS
- The Sound of Silence: Activating Silent Biosynthetic Gene Clusters in Marine Microorganisms
- (2015) F. Reen et al. Marine Drugs
- Biological targets and mechanisms of action of natural products from marine cyanobacteria
- (2015) Lilibeth A. Salvador-Reyes et al. NATURAL PRODUCT REPORTS
- Dereplication: racing to speed up the natural products discovery process
- (2015) Susana P. Gaudêncio et al. NATURAL PRODUCT REPORTS
- Computational approaches to natural product discovery
- (2015) Marnix H Medema et al. Nature Chemical Biology
- Correlating chemical sensitivity and basal gene expression reveals mechanism of action
- (2015) Matthew G Rees et al. Nature Chemical Biology
- Reinvigorating natural product combinatorial biosynthesis with synthetic biology
- (2015) Eunji Kim et al. Nature Chemical Biology
- The colibactin warhead crosslinks DNA
- (2015) Maria I. Vizcaino et al. Nature Chemistry
- Hunting microbial metabolites
- (2015) Eric W. Schmidt Nature Chemistry
- Discovery of microbial natural products by activation of silent biosynthetic gene clusters
- (2015) Peter J. Rutledge et al. NATURE REVIEWS MICROBIOLOGY
- MetaboAnalyst 3.0—making metabolomics more meaningful
- (2015) Jianguo Xia et al. NUCLEIC ACIDS RESEARCH
- antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters
- (2015) Tilmann Weber et al. NUCLEIC ACIDS RESEARCH
- Discovery of phosphonic acid natural products by mining the genomes of 10,000 actinomycetes
- (2015) Kou-San Ju et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Integration of high-content screening and untargeted metabolomics for comprehensive functional annotation of natural product libraries
- (2015) Kenji L. Kurita et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Searching molecular structure databases with tandem mass spectra using CSI:FingerID
- (2015) Kai Dührkop et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Antibiotic efficacy is linked to bacterial cellular respiration
- (2015) Michael A. Lobritz et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Thiopeptide antibiotics stimulate biofilm formation inBacillus subtilis
- (2015) Rachel Bleich et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Plant pathogenic anaerobic bacteria use aromatic polyketides to access aerobic territory
- (2015) G. Shabuer et al. SCIENCE
- Using fragmentation trees and mass spectral trees for identifying unknown compounds in metabolomics
- (2015) Arpana Vaniya et al. TRAC-TRENDS IN ANALYTICAL CHEMISTRY
- Prioritization of Natural Extracts by LC–MS-PCA for the Identification of New Photosensitizers for Photodynamic Therapy
- (2014) Norazwana Samat et al. ANALYTICAL CHEMISTRY
- Phenotypic Mapping of Metabolic Profiles Using Self-Organizing Maps of High-Dimensional Mass Spectrometry Data
- (2014) Cody R. Goodwin et al. ANALYTICAL CHEMISTRY
- Interactive XCMS Online: Simplifying Advanced Metabolomic Data Processing and Subsequent Statistical Analyses
- (2014) Harsha Gowda et al. ANALYTICAL CHEMISTRY
- Ion Mobility–Mass Spectrometry of Lasso Peptides: Signature of a Rotaxane Topology
- (2014) Kevin Jeanne Dit Fouque et al. ANALYTICAL CHEMISTRY
- Principal component analysis
- (2014) Rasmus Bro et al. Analytical Methods
- Metabolite identification through multiple kernel learning on fragmentation trees
- (2014) Huibin Shen et al. BIOINFORMATICS
- A simple peak detection and label-free quantitation algorithm for chromatography-mass spectrometry
- (2014) Ken Aoshima et al. BMC BIOINFORMATICS
- A Systematic Analysis of Biosynthetic Gene Clusters in the Human Microbiome Reveals a Common Family of Antibiotics
- (2014) Mohamed S. Donia et al. CELL
- Specialized Metabolites from the Microbiome in Health and Disease
- (2014) Gil Sharon et al. Cell Metabolism
- N-Terminal ArgD Peptides from the Classical Staphylococcus aureus Agr System Have Cytotoxic and Proinflammatory Activities
- (2014) David J. Gonzalez et al. CHEMISTRY & BIOLOGY
- Getting the right answers: understanding metabolomics challenges
- (2014) Stephan Beisken et al. EXPERT REVIEW OF MOLECULAR DIAGNOSTICS
- Distance Geometry Protocol to Generate Conformations of Natural Products to Structurally Interpret Ion Mobility-Mass Spectrometry Collision Cross Sections
- (2014) Sarah M. Stow et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Wavelet-Based Peak Detection and a New Charge Inference Procedure for MS/MS Implemented in ProteoWizard’s msConvert
- (2014) William R. French et al. JOURNAL OF PROTEOME RESEARCH
- MALDI imaging mass spectrometry: Spatial molecular analysis to enable a new age of discovery
- (2014) Megan M. Gessel et al. Journal of Proteomics
- Comparative Metabolomics and Structural Characterizations Illuminate Colibactin Pathway-Dependent Small Molecules
- (2014) Maria I. Vizcaino et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Metabolomic Tools for Secondary Metabolite Discovery from Marine Microbial Symbionts
- (2014) Lynsey Macintyre et al. Marine Drugs
- Accurate Dereplication of Bioactive Secondary Metabolites from Marine-Derived Fungi by UHPLC-DAD-QTOFMS and a MS/HRMS Library
- (2014) Sara Kildgaard et al. Marine Drugs
- Phenol Soluble Modulin (PSM) Variants of Community-Associated Methicillin-ResistantStaphylococcus aureus(MRSA) Captured Using Mass Spectrometry-Based Molecular Networking
- (2014) David J. Gonzalez et al. MOLECULAR & CELLULAR PROTEOMICS
- New kids on the block: novel informatics methods for natural product discovery
- (2014) Franziska Hufsky et al. NATURAL PRODUCT REPORTS
- Ion sources for mass spectrometric identification and imaging of molecular species
- (2014) Chhavi Bhardwaj et al. NATURAL PRODUCT REPORTS
- Secondary metabolomics: the impact of mass spectrometry-based approaches on the discovery and characterization of microbial natural products
- (2014) Daniel Krug et al. NATURAL PRODUCT REPORTS
- Bringing microbial interactions to light using imaging mass spectrometry
- (2014) Chao-Jen Shih et al. NATURAL PRODUCT REPORTS
- Emerging capabilities of mass spectrometry for natural products
- (2014) Alan K. Jarmusch et al. NATURAL PRODUCT REPORTS
- Mass spectrometry of natural products: current, emerging and future technologies
- (2014) Amina Bouslimani et al. NATURAL PRODUCT REPORTS
- The power of ion mobility-mass spectrometry for structural characterization and the study of conformational dynamics
- (2014) Francesco Lanucara et al. Nature Chemistry
- Retention time prediction for dereplication of natural products (CxHyOz) in LC–MS metabolite profiling
- (2014) Philippe J. Eugster et al. PHYTOCHEMISTRY
- Angucyclines as signals modulate the behaviors of Streptomyces coelicolor
- (2014) W. Wang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Targeted Capture and Heterologous Expression of the Pseudoalteromonas Alterochromide Gene Cluster in Escherichia coli Represents a Promising Natural Product Exploratory Platform
- (2014) Avena C. Ross et al. ACS Synthetic Biology
- Benznidazole Biotransformation and Multiple Targets in Trypanosoma cruzi Revealed by Metabolomics
- (2014) Andrea Trochine et al. PLoS Neglected Tropical Diseases
- Genetic Basis for the Biosynthesis of the Pharmaceutically Important Class of Epoxyketone Proteasome Inhibitors
- (2013) Michelle Schorn et al. ACS Chemical Biology
- Chemical dereplication of marine actinomycetes by liquid chromatography–high resolution mass spectrometry profiling and statistical analysis
- (2013) David Forner et al. ANALYTICA CHIMICA ACTA
- Image-Based 384-Well High-Throughput Screening Method for the Discovery of Skyllamycins A to C as Biofilm Inhibitors and Inducers of Biofilm Detachment in Pseudomonas aeruginosa
- (2013) Gabriel Navarro et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Chromatographic peak alignment using derivative dynamic time warping
- (2013) Christopher Bork et al. BIOTECHNOLOGY PROGRESS
- New Advances in Separation Science for Metabolomics: Resolving Chemical Diversity in a Post-Genomic Era
- (2013) Naomi L. Kuehnbaum et al. CHEMICAL REVIEWS
- “Function-First” Lead Discovery: Mode of Action Profiling of Natural Product Libraries Using Image-Based Screening
- (2013) Christopher J. Schulze et al. CHEMISTRY & BIOLOGY
- Liquid chromatography–mass spectrometry in metabolomics research: Mass analyzers in ultra high pressure liquid chromatography coupling
- (2013) Sara Forcisi et al. JOURNAL OF CHROMATOGRAPHY A
- Challenges and triumphs to genomics-based natural product discovery
- (2013) Paul R. Jensen et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Merging chemical ecology with bacterial genome mining for secondary metabolite discovery
- (2013) Maria I. Vizcaino et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- High-Resolution MS, MS/MS, and UV Database of Fungal Secondary Metabolites as a Dereplication Protocol for Bioactive Natural Products
- (2013) Tamam El-Elimat et al. JOURNAL OF NATURAL PRODUCTS
- Molecular Networking as a Dereplication Strategy
- (2013) Jane Y. Yang et al. JOURNAL OF NATURAL PRODUCTS
- Discoipyrroles A–D: Isolation, Structure Determination, and Synthesis of Potent Migration Inhibitors from Bacillus hunanensis
- (2013) Youcai Hu et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Large-scale cytological profiling for functional analysis of bioactive compounds
- (2013) Marcos H. Woehrmann et al. Molecular BioSystems
- Mechanism of action-based classification of antibiotics using high-content bacterial image analysis
- (2013) Kelly C. Peach et al. Molecular BioSystems
- Natural product isolation – how to get from biological material to pure compounds
- (2013) Franz Bucar et al. NATURAL PRODUCT REPORTS
- A global approach to analysis and interpretation of metabolic data for plant natural product discovery
- (2013) Manhoi Hur et al. NATURAL PRODUCT REPORTS
- Recent advances in the heterologous expression of microbial natural product biosynthetic pathways
- (2013) Sarah E. Ongley et al. NATURAL PRODUCT REPORTS
- Liquid chromatography quadrupole time-of-flight mass spectrometry characterization of metabolites guided by the METLIN database
- (2013) Zheng-Jiang Zhu et al. Nature Protocols
- Antimicrobial drug resistance affects broad changes in metabolomic phenotype in addition to secondary metabolism
- (2013) D. K. Derewacz et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- MS/MS networking guided analysis of molecule and gene cluster families
- (2013) D. D. Nguyen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Glycogenomics as a mass spectrometry-guided genome-mining method for microbial glycosylated molecules
- (2013) R. D. Kersten et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Using Functional Signature Ontology (FUSION) to Identify Mechanisms of Action for Natural Products
- (2013) M. B. Potts et al. Science Signaling
- Interspecies Interactions Stimulate Diversification of the Streptomyces coelicolor Secreted Metabolome
- (2013) M. F. Traxler et al. mBio
- Microbial Strain Prioritization Using Metabolomics Tools for the Discovery of Natural Products
- (2012) Yanpeng Hou et al. ANALYTICAL CHEMISTRY
- XCMS Online: A Web-Based Platform to Process Untargeted Metabolomic Data
- (2012) Ralf Tautenhahn et al. ANALYTICAL CHEMISTRY
- A View from Above: Cloud Plots to Visualize Global Metabolomic Data
- (2012) Gary J. Patti et al. ANALYTICAL CHEMISTRY
- New strategies for drug discovery: activation of silent or weakly expressed microbial gene clusters
- (2012) Kozo Ochi et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Development of Antibiotic Activity Profile Screening for the Classification and Discovery of Natural Product Antibiotics
- (2012) Weng Ruh Wong et al. CHEMISTRY & BIOLOGY
- Thoughts and facts about antibiotics: Where we are now and where we are heading
- (2012) János Bérdy JOURNAL OF ANTIBIOTICS
- Primer on Agar-Based Microbial Imaging Mass Spectrometry
- (2012) J. Y. Yang et al. JOURNAL OF BACTERIOLOGY
- Structural Mass Spectrometry: Rapid Methods for Separation and Analysis of Peptide Natural Products
- (2012) Cody R. Goodwin et al. JOURNAL OF NATURAL PRODUCTS
- Bromophycoic Acids: Bioactive Natural Products from a Fijian Red Alga Callophycus sp.
- (2012) Margaret E. Teasdale et al. JOURNAL OF ORGANIC CHEMISTRY
- Regulation of fungal secondary metabolism
- (2012) Axel A. Brakhage NATURE REVIEWS MICROBIOLOGY
- Metabolomics: the apogee of the omics trilogy
- (2012) Gary J. Patti et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Mass spectral molecular networking of living microbial colonies
- (2012) J. Watrous et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Interkingdom metabolic transformations captured by microbial imaging mass spectrometry
- (2012) W. J. Moree et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Interactions Between the Microbiota and the Immune System
- (2012) L. V. Hooper et al. SCIENCE
- Untargeted Metabolomics Reveals a Lack Of Synergy between Nifurtimox and Eflornithine against Trypanosoma brucei
- (2012) Isabel M. Vincent et al. PLoS Neglected Tropical Diseases
- Predicting the in Vivo Mechanism of Action for Drug Leads Using NMR Metabolomics
- (2011) Steven Halouska et al. ACS Chemical Biology
- Myxoprincomide: A Natural Product from Myxococcus xanthus Discovered by Comprehensive Analysis of the Secondary Metabolome
- (2011) Niña Socorro Cortina et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- SIMA: Simultaneous Multiple Alignment of LC/MS Peak Lists
- (2011) Björn Voss et al. BIOINFORMATICS
- Ion mobility mass spectrometry enables the efficient detection and identification of halogenated natural products from cyanobacteria with minimal sample preparation
- (2011) Eduardo Esquenazi et al. BIOORGANIC & MEDICINAL CHEMISTRY
- Accessing the Hidden Majority of Marine Natural Products through Metagenomics
- (2011) Mohamed S. Donia et al. CHEMBIOCHEM
- Dereplication of Microbial Natural Products by LC-DAD-TOFMS
- (2011) Kristian F. Nielsen et al. JOURNAL OF NATURAL PRODUCTS
- Imaging Mass Spectrometry and Genome Mining via Short Sequence Tagging Identified the Anti-Infective Agent Arylomycin inStreptomyces roseosporus
- (2011) Wei-Ting Liu et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Aligning extracted LC-MS peak lists via density maximization
- (2011) Venura Perera et al. Metabolomics
- Microbial competition between Bacillus subtilis and Staphylococcus aureus monitored by imaging mass spectrometry
- (2011) D. J. Gonzalez et al. MICROBIOLOGY-SGM
- LC-MS-based metabolomics
- (2011) Bin Zhou et al. Molecular BioSystems
- A mass spectrometry–guided genome mining approach for natural product peptidogenomics
- (2011) Roland D Kersten et al. Nature Chemical Biology
- Imaging mass spectrometry in microbiology
- (2011) Jeramie D. Watrous et al. NATURE REVIEWS MICROBIOLOGY
- antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences
- (2011) Marnix H. Medema et al. NUCLEIC ACIDS RESEARCH
- Temporal dynamics of natural product biosynthesis in marine cyanobacteria
- (2011) E. Esquenazi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Multivariate methods in metabolomics – from pre-processing to dimension reduction and statistical analysis
- (2011) Kristian Hovde Liland TRAC-TRENDS IN ANALYTICAL CHEMISTRY
- Data-processing strategies for metabolomics studies
- (2011) Margriet M.W.B. Hendriks et al. TRAC-TRENDS IN ANALYTICAL CHEMISTRY
- Computational mass spectrometry for metabolomics: Identification of metabolites and small molecules
- (2010) Steffen Neumann et al. ANALYTICAL AND BIOANALYTICAL CHEMISTRY
- MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
- (2010) Tomáš Pluskal et al. BMC BIOINFORMATICS
- Halogen Atoms in the Modern Medicinal Chemistry: Hints for the Drug Design
- (2010) Marcelo Hernandes et al. CURRENT DRUG TARGETS
- NMR-spectroscopic analysis of mixtures: from structure to function
- (2010) Ry R Forseth et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- Rare earth elements activate the secondary metabolite–biosynthetic gene clusters in Streptomyces coelicolor A3(2)
- (2010) Yukinori Tanaka et al. JOURNAL OF ANTIBIOTICS
- The evolution of partial least squares models and related chemometric approaches in metabonomics and metabolic phenotyping
- (2010) Judith M. Fonville et al. JOURNAL OF CHEMOMETRICS
- Current approaches to exploit actinomycetes as a source of novel natural products
- (2010) Olga Genilloud et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- MassBank: a public repository for sharing mass spectral data for life sciences
- (2010) Hisayuki Horai et al. JOURNAL OF MASS SPECTROMETRY
- Explorative Solid-Phase Extraction (E-SPE) for Accelerated Microbial Natural Product Discovery, Dereplication, and Purification
- (2010) Maria Månsson et al. JOURNAL OF NATURAL PRODUCTS
- Natural Products Version 2.0: Connecting Genes to Molecules
- (2010) Christopher T. Walsh et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- mzML—a Community Standard for Mass Spectrometry Data
- (2010) Lennart Martens et al. MOLECULAR & CELLULAR PROTEOMICS
- Methods and options for the heterologous production of complex natural products
- (2010) Haoran Zhang et al. NATURAL PRODUCT REPORTS
- Symbiotic streptomycetes provide antibiotic combination prophylaxis for wasp offspring
- (2010) Johannes Kroiss et al. Nature Chemical Biology
- Recognition of peptidoglycan from the microbiota by Nod1 enhances systemic innate immunity
- (2010) Thomas B Clarke et al. NATURE MEDICINE
- Isolation and characterisation of amphotericin B analogues and truncated polyketide intermediates produced by genetic engineering of Streptomyces nodosus
- (2010) Barry Murphy et al. ORGANIC & BIOMOLECULAR CHEMISTRY
- Quorum-Sensing-Regulated Bactobolin Production byBurkholderia thailandensisE264
- (2010) Mohammad R. Seyedsayamdost et al. ORGANIC LETTERS
- Genome-minimized Streptomyces host for the heterologous expression of secondary metabolism
- (2010) M. Komatsu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- MetAlign: Interface-Driven, Versatile Metabolomics Tool for Hyphenated Full-Scan Mass Spectrometry Data Preprocessing
- (2009) Arjen Lommen ANALYTICAL CHEMISTRY
- Interspecies Chemical Communication in Bacterial Development
- (2009) Paul D. Straight et al. Annual Review of Microbiology
- Antibiotic Overproduction by rpsL and rsmG Mutants of Various Actinomycetes
- (2009) Y. Tanaka et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Retention time alignment algorithms for LC/MS data must consider non-linear shifts
- (2009) Katharina Podwojski et al. BIOINFORMATICS
- Automated genome mining for natural products
- (2009) Michael HT Li et al. BMC BIOINFORMATICS
- Postulating Modes of Action of Compounds with Antimicrobial Activities through Metabolomics Analysis
- (2009) Yi Liu et al. CHROMATOGRAPHIA
- Pedein A and B: Production, Isolation, Structure Elucidation and Biological Properties of New Antifungal Cyclopeptides from Chondromyces pediculatus (Myxobacteria)
- (2009) Brigitte Kunze et al. JOURNAL OF ANTIBIOTICS
- Palmyramide A, a Cyclic Depsipeptide from a Palmyra Atoll Collection of the Marine CyanobacteriumLyngbya majuscula†
- (2009) Masatoshi Taniguchi et al. JOURNAL OF NATURAL PRODUCTS
- CE50: Quantifying collision induced dissociation energy for small molecule characterization and identification
- (2009) Tzipporah M. Kertesz et al. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
- Antibacterial discovery in actinomycetes strains with mutations in RNA polymerase or ribosomal protein S12
- (2009) Takeshi Hosaka et al. NATURE BIOTECHNOLOGY
- Translating metabolic exchange with imaging mass spectrometry
- (2009) Yu-Liang Yang et al. Nature Chemical Biology
- Triggering cryptic natural product biosynthesis in microorganisms
- (2009) Kirstin Scherlach et al. ORGANIC & BIOMOLECULAR CHEMISTRY
- Desorption electrospray ionization mass spectrometry reveals surface-mediated antifungal chemical defense of a tropical seaweed
- (2009) A. L. Lane et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Probing marine natural product defenses with DESI-imaging mass spectrometry
- (2009) E. Esquenazi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Efficient mining of myxobacterial metabolite profiles enabled by liquid chromatography–electrospray ionisation-time-of-flight mass spectrometry and compound-based principal component analysis
- (2008) Daniel Krug et al. ANALYTICA CHIMICA ACTA
- XCMS2: Processing Tandem Mass Spectrometry Data for Metabolite Identification and Structural Characterization
- (2008) H. P. Benton et al. ANALYTICAL CHEMISTRY
- Subsurface Biomolecular Imaging ofStreptomycescoelicolorUsing Secondary Ion Mass Spectrometry
- (2008) Seetharaman Vaidyanathan et al. ANALYTICAL CHEMISTRY
- Rules of Engagement: Interspecies Interactions that Regulate Microbial Communities
- (2008) Ainslie E.F. Little et al. Annual Review of Microbiology
- Dramatic Activation of Antibiotic Production in Streptomyces coelicolor by Cumulative Drug Resistance Mutations
- (2008) G. Wang et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Discovering the Hidden Secondary Metabolome of Myxococcus xanthus: a Study of Intraspecific Diversity
- (2008) D. Krug et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- TOF-SIMS investigation of Streptomyces coelicolor, a mycelial bacterium
- (2008) Seetharaman Vaidyanathan et al. APPLIED SURFACE SCIENCE
- Recent advances in solid-state fermentation
- (2008) Reeta Rani Singhania et al. BIOCHEMICAL ENGINEERING JOURNAL
- SIRIUS: decomposing isotope patterns for metabolite identification†
- (2008) Sebastian Böcker et al. BIOINFORMATICS
- ProteoWizard: open source software for rapid proteomics tools development
- (2008) Darren Kessner et al. BIOINFORMATICS
- OpenMS – An open-source software framework for mass spectrometry
- (2008) Marc Sturm et al. BMC BIOINFORMATICS
- Critical assessment of alignment procedures for LC-MS proteomics and metabolomics measurements
- (2008) Eva Lange et al. BMC BIOINFORMATICS
- Highly sensitive feature detection for high resolution LC/MS
- (2008) Ralf Tautenhahn et al. BMC BIOINFORMATICS
- Lynamicins A−E, Chlorinated Bisindole Pyrrole Antibiotics from a Novel Marine Actinomycete†
- (2008) Katherine A. McArthur et al. JOURNAL OF NATURAL PRODUCTS
- Moromycins A and B, Isolation and Structure Elucidation ofC-Glycosylangucycline-Type Antibiotics fromStreptomycessp. KY002
- (2008) Mohamed S. Abdelfattah et al. JOURNAL OF NATURAL PRODUCTS
- Diffusible signals and interspecies communication in bacteria
- (2008) R. P. Ryan et al. MICROBIOLOGY-SGM
- Visualizing the spatial distribution of secondary metabolites produced by marine cyanobacteria and sponges via MALDI-TOF imaging
- (2008) Eduardo Esquenazi et al. Molecular BioSystems
- Natural product isolation
- (2008) Otto Sticher NATURAL PRODUCT REPORTS
- Methods for isolation, purification and structural elucidation of bioactive secondary metabolites from marine invertebrates
- (2008) Sherif S Ebada et al. Nature Protocols
- Biosynthetic origin of natural products isolated from marine microorganism-invertebrate assemblages
- (2008) T. L. Simmons et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mass measurement accuracy comparisons between a double-focusing magnetic sector and a time-of-flight mass analyzer
- (2008) Michael S. Bereman et al. RAPID COMMUNICATIONS IN MASS SPECTROMETRY
- Visualization of GC/TOF-MS-Based Metabolomics Data for Identification of Biochemically Interesting Compounds Using OPLS Class Models
- (2007) Susanne Wiklund et al. ANALYTICAL CHEMISTRY
- Surface-induced dissociation of small molecules, peptides, and non-covalent protein complexes
- (2007) Vicki H. Wysocki et al. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
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