Advances in the discovery of genetic elements underlying longissimus dorsi muscle growth and development in the pig

Mapping and analysis of a spatiotemporal H3K27ac and gene expression spectrum in pigs

(2022) Yaling Zhu et al.   Science China-Life Sciences

Epigenomics analysis of miRNA cis-regulatory elements in pig muscle and fat tissues

(2022) Mingyang Hu et al.   GENOMICS

Pig models for Duchenne muscular dystrophy – from disease mechanisms to validation of new diagnostic and therapeutic concepts

(2022) Michael Stirm et al.   NEUROMUSCULAR DISORDERS

Single-cell eQTL mapping identifies cell type–specific genetic control of autoimmune disease

(2022) Seyhan Yazar et al.   SCIENCE

Admixture and breed traceability in European indigenous pig breeds and wild boar using genome-wide SNP data

(2022) Christos Dadousis et al.   Scientific Reports

Reorganization of 3D genome architecture across wild boar and Bama pig adipose tissues

(2022) Jiaman Zhang et al.   Journal of Animal Science and Biotechnology

Enhancer-promoter interaction maps provide insights into skeletal muscle-related traits in pig genome

(2022) Jingjin Li et al.   BMC BIOLOGY

An automated method to quantify the composition of live pigs based on computed tomography segmentation using deep neural networks

(2021) Xiang Pan et al.   COMPUTERS AND ELECTRONICS IN AGRICULTURE

Reorganization of chromatin architecture during prenatal development of porcine skeletal muscle

(2021) Renqiang Yuan et al.   DNA RESEARCH

Skeletal muscle fibers count on nuclear numbers for growth

(2021) Vikram Prasad et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research

(2021) Colin Kern et al.   Nature Communications

The landscape of chromatin accessibility in skeletal muscle during embryonic development in pigs

(2021) Jingwei Yue et al.   Journal of Animal Science and Biotechnology

Integrated Genome-Wide Analysis of MicroRNA Expression Quantitative Trait Loci in Pig Longissimus Dorsi Muscle

(2021) Kaitlyn R. Daza et al.   Frontiers in Genetics

Comprehensive analysis of lncRNAs involved in skeletal muscle development in ZBED6-knockout Bama pigs

(2021) Dandan Wang et al.   BMC GENOMICS

Weight prediction of pork cuts and tissue composition using spectral graph wavelet

(2021) Majid Masoumi et al.   JOURNAL OF FOOD ENGINEERING

A pig BodyMap transcriptome reveals diverse tissue physiologies and evolutionary dynamics of transcription

(2021) Long Jin et al.   Nature Communications

Identifying the complex genetic architecture of growth and fatness traits in a Duroc pig population

(2021) Zhe ZHANG et al.   Journal of Integrative Agriculture

GWAS and Post-GWAS High-Resolution Mapping Analyses Identify Strong Novel Candidate Genes Influencing the Fatty Acid Composition of the Longissimus dorsi Muscle in Pigs

(2021) Jae-Bong Lee et al.   Genes

Comparative Analysis of Promoters and Enhancers in the Pituitary Glands of the Bama Xiang and Large White Pigs

(2021) Zhimin Zhou et al.   Frontiers in Genetics

The FAANG Data Portal: Global, Open-Access, “FAIR”, and Richly Validated Genotype to Phenotype Data for High-Quality Functional Annotation of Animal Genomes

(2021) Peter W. Harrison et al.   Frontiers in Genetics

Genomic Analyses Revealed the Genetic Difference and Potential Selection Genes of Growth Traits in Two Duroc Lines

(2021) Desen Li et al.   Frontiers in Veterinary Science

Pig genome functional annotation enhances the biological interpretation of complex traits and human disease

(2021) Zhangyuan Pan et al.   Nature Communications

Profiling of open chromatin in developing pig (Sus scrofa) muscle to identify regulatory regions

(2021) Mazdak Salavati et al.   G3-Genes Genomes Genetics

Overview of Metabolomic Analysis and the Integration with Multi-Omics for Economic Traits in Cattle

(2021) Dan Hao et al.   Metabolites

Integrative ATAC-seq and RNA-seq Analysis of the Longissimus Muscle of Luchuan and Duroc Pigs

(2021) Weiwei Miao et al.   Frontiers in Nutrition

Chromatin accessibility is associated with the changed expression of miRNAs that target members of the Hippo pathway during myoblast differentiation

(2020) Huanhuan Zhou et al.   Cell Death & Disease

Association Analysis of Single-Cell RNA Sequencing and Proteomics Reveals a Vital Role of Ca2+ Signaling in the Determination of Skeletal Muscle Development Potential

(2020) Kai Qiu et al.   Cells

Genomic Analysis Using Bayesian Methods under Different Genotyping Platforms in Korean Duroc Pigs

(2020) Jungjae Lee et al.   Animals

Metabolite Genome-Wide Association Study (mGWAS) and Gene-Metabolite Interaction Network Analysis Reveal Potential Biomarkers for Feed Efficiency in Pigs

(2020) Xiao Wang et al.   Metabolites

Comparison of two muscle fibre staining techniques and their relation to pork quality traits

(2020) Nicole Lebedová et al.   CZECH JOURNAL OF ANIMAL SCIENCE

Signaling Pathways That Control Muscle Mass

(2020) Anna Vainshtein et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Analysis of Transcriptome and miRNAome in the Muscle of Bamei Pigs at Different Developmental Stages

(2020) Guofang Wu et al.   Animals

Isolation and ex vivo cultivation of single myofibers from porcine muscle

(2020) Katja Stange et al.   IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL

Nuclear numbers in syncytial muscle fibers promote size but limit the development of larger myonuclear domains

(2020) Alyssa A. W. Cramer et al.   Nature Communications

Identification and functional prediction of long intergenic noncoding RNAs in fetal porcine longissimus dorsi muscle

(2020) Cen-cen LI et al.   Journal of Integrative Agriculture

Genetic control of longissimus dorsi muscle gene expression variation and joint analysis with phenotypic quantitative trait loci in pigs

(2019) Deborah Velez-Irizarry et al.   BMC GENOMICS

A genome-wide association study for Backfat thickness to 100 kg and Loin muscle thickness in domestic pigs based on genotyping by sequencing

(2019) Dejuan Chen et al.   PHYSIOLOGICAL GENOMICS

A whole genome sequence association study of muscle fiber traits in a White Duroc × Erhualian F2 resource population

(2019) Tianfu Guo et al.   ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES

Comprehensive Analysis of lncRNAs and circRNAs Reveals the Metabolic Specialization in Oxidative and Glycolytic Skeletal Muscles

(2019) Linyuan Shen et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Meta-analysis of genome-wide association studies for loin muscle area and loin muscle depth in two Duroc pig populations

(2019) Zhanwei Zhuang et al.   PLoS One

Genomic variants associated with the number and diameter of muscle fibers in pigs as revealed by a genome-wide association study

(2019) L. Zhang et al.   Animal

Genome-wide association study for carcass quality traits and growth in purebred and crossbred pigs1

(2019) Matteo Bergamaschi et al.   JOURNAL OF ANIMAL SCIENCE

High Altitude Adaptability and Meat Quality in Tibetan Pigs: A Reference for Local Pork Processing and Genetic Improvement

(2019) Mailin Gan et al.   Animals

Atmospheric Ammonia Affects Myofiber Development and Lipid Metabolism in Growing Pig Muscle

(2019) Shanlong Tang et al.   Animals

A genome scan for selection signatures in Taihu pig breeds using next-generation sequencing

(2018) Z. Wang et al.   Animal

Screening for candidate genes related with histological microstructure, meat quality and carcass characteristic in pig based on RNA-seq data

(2018) Katarzyna Ropka-Molik et al.   ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES

Comparative transcriptomic analysis of skeletal muscle tissue during prenatal stages in Tongcheng and Yorkshire pig using RNA-seq

(2018) Huijing Liu et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Combined GWAS and LDLA approaches to improve genome-wide quantitative trait loci detection affecting carcass and meat quality traits in pig

(2018) Frédéric Hérault et al.   MEAT SCIENCE

MuscleJ: a high-content analysis method to study skeletal muscle with a new Fiji tool

(2018) Alicia Mayeuf-Louchart et al.   Skeletal Muscle

A comparison of prenatal muscle transcriptome and proteome profiles between pigs with divergent growth phenotypes

(2018) Peng Shang et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

Myogenin promotes myocyte fusion to balance fibre number and size

(2018) Massimo Ganassi et al.   Nature Communications

Functional Annotation of Animal Genomes (FAANG): Current Achievements and Roadmap

(2018) Elisabetta Giuffra et al.   Annual Review of Animal Biosciences

Assessing the accuracy of measurements obtained by dual-energy X-ray absorptiometry on pig carcasses and primal cuts

(2018) M. Kipper et al.   MEAT SCIENCE

Identification of differentially expressed genes in longissimus dorsi muscle between Wei and Yorkshire pigs using RNA sequencing

(2017) Jingen Xu et al.   Genes & Genomics

Control of muscle formation by the fusogenic micropeptide myomixer

(2017) Pengpeng Bi et al.   SCIENCE

The microprotein Minion controls cell fusion and muscle formation

(2017) Qiao Zhang et al.   Nature Communications

Identification of genes in longissimus dorsi muscle differentially expressed between Wannanhua and Yorkshire pigs using RNA-sequencing

(2016) X.-J. Li et al.   ANIMAL GENETICS

Transcriptomic gene profiling of porcine muscle tissue depending on histological properties

(2016) Katarzyna Ropka-Molik et al.   ANIMAL SCIENCE JOURNAL

SNP- and haplotype-based genome-wide association studies for growth, carcass, and meat quality traits in a Duroc multigenerational population

(2016) Shuji Sato et al.   BMC GENETICS

Multi-breed genome-wide association study reveals heterogeneous loci associated with loin eye area in pigs

(2016) Yuna He et al.   JOURNAL OF APPLIED GENETICS

Microbial genome-wide association studies: lessons from human GWAS

(2016) Robert A. Power et al.   NATURE REVIEWS GENETICS

Not all the number of skeletal muscle fibers is determined prenatally

(2015) Mingsen Li et al.   BMC DEVELOPMENTAL BIOLOGY

Applications of emerging imaging techniques for meat quality and safety detection and evaluation: A review

(2015) Zhenjie Xiong et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

Advances and Applications of Single-Cell Sequencing Technologies

(2015) Yong Wang et al.   MOLECULAR CELL

RNA-seq transcriptome analysis of extensor digitorum longus and soleus muscles in large white pigs

(2015) Jiayu Zhu et al.   MOLECULAR GENETICS AND GENOMICS

Genome-wide association study for rib eye muscle area in a Large White×Minzhu F2 pig resource population

(2015) Yun-yan GUO et al.   Journal of Integrative Agriculture

Genome-Wide Association Analysis for Blood Lipid Traits Measured in Three Pig Populations Reveals a Substantial Level of Genetic Heterogeneity

(2015) Hui Yang et al.   PLoS One

Genome-wide association analysis identifies quantitative trait loci for growth in a Landrace purebred population

(2014) E. J. Jung et al.   ANIMAL GENETICS

Whole Genome Association Studies of Residual Feed Intake and Related Traits in the Pig

(2013) Suneel K. Onteru et al.   PLoS One

Mapping QTL for porcine muscle fibre traits in a White Duroc × Erhualian F2resource population

(2009) W.B. Li et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Genome-wide association analysis in domestic animals: a powerful approach for genetic dissection of trait loci

(2008) Leif Andersson   GENETICA

A quantitative trait locus genome scan for porcine muscle fiber traits reveals overdominance and epistasis1

(2008) J. Estellé et al.   JOURNAL OF ANIMAL SCIENCE

The genetics of vertebrate myogenesis

(2008) Robert J. Bryson-Richardson et al.   NATURE REVIEWS GENETICS