Identification of genes in longissimus dorsi muscle differentially expressed between Wannanhua and Yorkshire pigs using RNA-sequencing

Application of the microarray technology to the transcriptional analysis of muscle phenotypes in pigs

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Carnitine Palmitoyltransferase 1B 531K Allele Carriers Sustain a Higher Respiratory Quotient after Aerobic Exercise, but β3-Adrenoceptor 64R Allele Does Not Affect Lipolysis: A Human Model

(2014) Eduardo Gómez-Gómez et al.   PLoS One

Niacin supplementation increases the number of oxidative type I fibers in skeletal muscle of growing pigs

(2013) Muckta Khan et al.   BMC Veterinary Research

Genome-wide association study for intramuscular fatty acid composition in an Iberian × Landrace cross1

(2012) Y. Ramayo-Caldas et al.   JOURNAL OF ANIMAL SCIENCE

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Microarrays, deep sequencing and the true measure of the transcriptome

(2011) John H Malone et al.   BMC BIOLOGY

Differential expression in RNA-seq: A matter of depth

(2011) S. Tarazona et al.   GENOME RESEARCH

Genetic and environmental effects on meat quality

(2010) R.D. Warner et al.   MEAT SCIENCE

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Breed difference and regulation of the porcine adipose triglyceride lipase and hormone sensitive lipase byTNF��

(2009) T. Shan et al.   ANIMAL GENETICS

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

Porcine CSRP3: polymorphism and association analyses with meat quality traits and comparative analyses with CSRP1 and CSRP2

(2009) Xuewen Xu et al.   MOLECULAR BIOLOGY REPORTS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Differentially expressed transcripts in adipose tissue between Korean native pig and Yorkshire breeds

(2008) J.-K. Moon et al.   ANIMAL GENETICS

Muscle fiber characteristics, myofibrillar protein isoforms, and meat quality

(2008) Y.M. Choi et al.   Livestock Science

The relation between glycogen, lactate content and muscle fiber type composition, and their influence on postmortem glycolytic rate and pork quality

(2008) J.H. Choe et al.   MEAT SCIENCE

Characterization of the porcine differentially expressed PDK4 gene and association with meat quality

(2008) Jing Lan et al.   MOLECULAR BIOLOGY REPORTS

Next-generation DNA sequencing

(2008) Jay Shendure et al.   NATURE BIOTECHNOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

Fatty acid-binding proteins: role in metabolic diseases and potential as drug targets

(2008) Masato Furuhashi et al.   NATURE REVIEWS DRUG DISCOVERY

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing

(2008) U. Nagalakshmi et al.   SCIENCE

A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome

(2008) M. Sultan et al.   SCIENCE

Comparisons of longissimus muscle metabolic enzymes and muscle fiber types in Korean and western pig breeds

(2007) Nam-Kuk Kim et al.   MEAT SCIENCE