Gut Microbiome: Profound Implications for Diet and Disease

Carbohydrate quality and human health: a series of systematic reviews and meta-analyses

(2019) Andrew Reynolds et al.   LANCET

Metabolomics and Microbiomes as Potential Tools to Evaluate the Effects of the Mediterranean Diet

(2019) Qi Jin et al.   Nutrients

The Glucoamylase Inhibitor Acarbose Has a Diet-Dependent and Reversible Effect on the Murine Gut Microbiome

(2019) Nielsen T. Baxter et al.   mSphere

The neuroactive potential of the human gut microbiota in quality of life and depression

(2019) Mireia Valles-Colomer et al.   Nature Microbiology

Interactions between a pathogenic Blastocystis subtype and gut microbiota: in vitro and in vivo studies

(2019) John Anthony Yason et al.   Microbiome

The Effects of Prebiotics and Substances with Prebiotic Properties on Metabolic and Inflammatory Biomarkers in Individuals with Type 2 Diabetes Mellitus: A Systematic Review

(2019) Angela G. Colantonio et al.   Journal of the Academy of Nutrition and Dietetics

Fasting-Mimicking Diet Modulates Microbiota and Promotes Intestinal Regeneration to Reduce Inflammatory Bowel Disease Pathology

(2019) Priya Rangan et al.   Cell Reports

Faecal bacterial and short-chain fatty acids signature in hypercholesterolemia

(2019) A. B. Granado-Serrano et al.   Scientific Reports

Red and Processed Meat and Mortality in a Low Meat Intake Population

(2019) Saeed Alshahrani et al.   Nutrients

The Impact of Low-FODMAPs, Gluten-Free, and Ketogenic Diets on Gut Microbiota Modulation in Pathological Conditions

(2019) Sofia Reddel et al.   Nutrients

Man-made microbial resistances in built environments

(2019) Alexander Mahnert et al.   Nature Communications

Dynamics of Human Gut Microbiota and Short-Chain Fatty Acids in Response to Dietary Interventions with Three Fermentable Fibers

(2019) Nielson T. Baxter et al.   mBio

A new genomic blueprint of the human gut microbiota

(2019) Alexandre Almeida et al.   NATURE

Age, Sex, and Cardiovascular Risk Attributable to Lipoprotein Cholesterol Among Chinese Individuals with Coronary Artery Disease: A Case–Control Study

(2019) Ting-Ting Wu et al.   Metabolic Syndrome and Related Disorders

Suppression of the gut microbiome ameliorates age-related arterial dysfunction and oxidative stress in mice

(2019) Vienna E. Brunt et al.   JOURNAL OF PHYSIOLOGY-LONDON

Controversies and reality of the FODMAP diet for patients with irritable bowel syndrome

(2019) Emma P Halmos et al.   JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY

Human colon mucosal biofilms from healthy or colon cancer hosts are carcinogenic

(2019) Sarah Tomkovich et al.   JOURNAL OF CLINICAL INVESTIGATION

Associations of Dietary Cholesterol or Egg Consumption With Incident Cardiovascular Disease and Mortality

(2019) Victor W. Zhong et al.   JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION

Mental health status and dietary intake among California adults: a population-based survey

(2019) Jim E. Banta et al.   INTERNATIONAL JOURNAL OF FOOD SCIENCES AND NUTRITION

Metformin-induced changes of the gut microbiota in healthy young men: results of a non-blinded, one-armed intervention study

(2019) Thomas Bryrup et al.   DIABETOLOGIA

Adaptive Strategies of the Candidate Probiotic E. coli Nissle in the Mammalian Gut

(2019) Nathan Crook et al.   Cell Host & Microbe

Performance Characteristics of Fecal Immunochemical Tests for Colorectal Cancer and Advanced Adenomatous Polyps

(2019) Thomas F. Imperiale et al.   ANNALS OF INTERNAL MEDICINE

Association Among Dietary Supplement Use, Nutrient Intake, and Mortality Among U.S. Adults

(2019) Fan Chen et al.   ANNALS OF INTERNAL MEDICINE

Food processing, gut microbiota and the globesity problem

(2019) Lisa Miclotte et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

Statin therapy increases lipoprotein(a) levels

(2019) Sotirios Tsimikas et al.   EUROPEAN HEART JOURNAL

Coffee consumption and all-cause and cause-specific mortality: a meta-analysis by potential modifiers

(2019) Youngyo Kim et al.   EUROPEAN JOURNAL OF EPIDEMIOLOGY

Dietary Patterns and Incident Heart Failure in U.S. Adults Without Known Coronary Disease

(2019) Kyla M. Lara et al.   JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY

Mid-life microbiota crises: middle age is associated with pervasive neuroimmune alterations that are reversed by targeting the gut microbiome

(2019) Marcus Boehme et al.   MOLECULAR PSYCHIATRY

Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

(2019) Andrew Maltez Thomas et al.   NATURE MEDICINE

Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer

(2019) Jakob Wirbel et al.   NATURE MEDICINE

The short-chain fatty acid propionate increases glucagon and FABP4 production, impairing insulin action in mice and humans

(2019) Amir Tirosh et al.   Science Translational Medicine

Protective effect of prebiotic and exercise intervention on knee health in a rat model of diet-induced obesity

(2019) Jaqueline Lourdes Rios et al.   Scientific Reports

Nutrient Intake, Diet Quality, and Diet Diversity in Irritable Bowel Syndrome and the Impact of the Low FODMAP Diet

(2019) Heidi M. Staudacher et al.   Journal of the Academy of Nutrition and Dietetics

Candida albicans induces mucosal bacterial dysbiosis that promotes invasive infection

(2019) Martinna Bertolini et al.   PLoS Pathogens

A Metagenomic Meta-analysis Reveals Functional Signatures of Health and Disease in the Human Gut Microbiome

(2019) Courtney R. Armour et al.   mSystems

Model of personalized postprandial glycemic response to food developed for an Israeli cohort predicts responses in Midwestern American individuals

(2019) Helena Mendes-Soares et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Human Gut Microbiota from Autism Spectrum Disorder Promote Behavioral Symptoms in Mice

(2019) Gil Sharon et al.   CELL

Dynamic Modulation of the Gut Microbiota and Metabolome by Bacteriophages in a Mouse Model

(2019) Bryan B. Hsu et al.   Cell Host & Microbe

Daily Sampling Reveals Personalized Diet-Microbiome Associations in Humans

(2019) Abigail J. Johnson et al.   Cell Host & Microbe

Meta-Analysis of Randomized Controlled Trials of Red Meat Consumption in Comparison With Various Comparison Diets on Cardiovascular Risk Factors

(2019) Marta Guasch-Ferré et al.   CIRCULATION

Mapping human microbiome drug metabolism by gut bacteria and their genes

(2019) Michael Zimmermann et al.   NATURE

Supplementation with Akkermansia muciniphila in overweight and obese human volunteers: a proof-of-concept exploratory study

(2019) Clara Depommier et al.   NATURE MEDICINE

Ruminococcus gnavus, a member of the human gut microbiome associated with Crohn’s disease, produces an inflammatory polysaccharide

(2019) Matthew T. Henke et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Small intestinal microbial dysbiosis underlies symptoms associated with functional gastrointestinal disorders

(2019) George B. Saffouri et al.   Nature Communications

Quantitative microbiome profiling disentangles inflammation- and bile duct obstruction-associated microbiota alterations across PSC/IBD diagnoses

(2019) Sara Vieira-Silva et al.   Nature Microbiology

Transient Osmotic Perturbation Causes Long-Term Alteration to the Gut Microbiota

(2018) Carolina Tropini et al.   CELL

The Gut Microbiota Mediates the Anti-Seizure Effects of the Ketogenic Diet

(2018) Christine A. Olson et al.   CELL

Intermittent Fasting Confers Protection in CNS Autoimmunity by Altering the Gut Microbiota

(2018) Francesca Cignarella et al.   Cell Metabolism

Metformin Alters Upper Small Intestinal Microbiota that Impact a Glucose-SGLT1-Sensing Glucoregulatory Pathway

(2018) Paige V. Bauer et al.   Cell Metabolism

The Unregulated Probiotic Market

(2018) Claudio de Simone   Clinical Gastroenterology and Hepatology

Influence of low FODMAP and gluten-free diets on disease activity and intestinal microbiota in patients with non-celiac gluten sensitivity

(2018) Walburga Dieterich et al.   CLINICAL NUTRITION

Association of choline and betaine levels with cancer incidence and survival: A meta-analysis

(2018) Jiyoung Youn et al.   CLINICAL NUTRITION

Short-Term, Intermittent Fasting Induces Long-Lasting Gut Health and TOR-Independent Lifespan Extension

(2018) James H. Catterson et al.   CURRENT BIOLOGY

Towards utilization of the human genome and microbiome for personalized nutrition

(2018) Stavros Bashiardes et al.   CURRENT OPINION IN BIOTECHNOLOGY

Altered gut microbiome composition in children with refractory epilepsy after ketogenic diet

(2018) Yunjian Zhang et al.   EPILEPSY RESEARCH

Interactions Between Diet and the Intestinal Microbiota Alter Intestinal Permeability and Colitis Severity in Mice

(2018) Sean R. Llewellyn et al.   GASTROENTEROLOGY

Fructan, Rather Than Gluten, Induces Symptoms in Patients With Self-Reported Non-Celiac Gluten Sensitivity

(2018) Gry I. Skodje et al.   GASTROENTEROLOGY

Probiotics to Prevent Clostridium difficile Infection in Patients Receiving Antibiotics

(2018) Joshua Z. Goldenberg et al.   JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION

Lactobacillus gasseri BNR17 Supplementation Reduces the Visceral Fat Accumulation and Waist Circumference in Obese Adults: A Randomized, Double-Blind, Placebo-Controlled Trial

(2018) Joohee Kim et al.   JOURNAL OF MEDICINAL FOOD

Impact of Dietary Fiber Consumption on Insulin Resistance and the Prevention of Type 2 Diabetes

(2018) Martin O Weickert et al.   JOURNAL OF NUTRITION

Gut Microbiome-Induced Shift of Acetate to Butyrate Positively Manages Dysbiosis in High Fat Diet

(2018) Xu Si et al.   MOLECULAR NUTRITION & FOOD RESEARCH

Time for food: The impact of diet on gut microbiota and human health

(2018) Na Zhang et al.   NUTRITION

Dietary interventions for autism spectrum disorder: New perspectives from the gut-brain axis

(2018) Ceymi Doenyas   PHYSIOLOGY & BEHAVIOR

Oral administration of short chain fatty acids could attenuate fat deposition of pigs

(2018) A. R. Jiao et al.   PLoS One

What is the evidence for a role for diet and nutrition in osteoarthritis?

(2018) Sally Thomas et al.   RHEUMATOLOGY

Dietary Cholesterol and the Lack of Evidence in Cardiovascular Disease

(2018) Ghada Soliman   Nutrients

OUP accepted manuscript

(2018)   Advances in Nutrition

Role of the gut microbiota in nutrition and health

(2018) Ana M Valdes et al.   BMJ-British Medical Journal

Role of the gut microbiota in nutrition and health

(2018) Ana M Valdes et al.   BMJ-British Medical Journal

5-Aminosalicylic Acid Alters the Gut Bacterial Microbiota in Patients With Ulcerative Colitis

(2018) Jun Xu et al.   Frontiers in Microbiology

Urbanization Reduces Transfer of Diverse Environmental Microbiota Indoors

(2018) Anirudra Parajuli et al.   Frontiers in Microbiology

Dietary Fiber Treatment Corrects the Composition of Gut Microbiota, Promotes SCFA Production, and Suppresses Colon Carcinogenesis

(2018) Faraz Bishehsari et al.   Genes

Asymptomatic Intestinal Colonization with Protist Blastocystis Is Strongly Associated with Distinct Microbiome Ecological Patterns

(2018) M. E. Nieves-Ramírez et al.   mSystems

Microbial Eukaryotes: a Missing Link in Gut Microbiome Studies

(2018) Isabelle Laforest-Lapointe et al.   mSystems

The Gut-Brain Axis and the Microbiome: Clues to Pathophysiology and Opportunities for Novel Management Strategies in Irritable Bowel Syndrome (IBS)

(2018) Eamonn Quigley   Journal of Clinical Medicine

Cannabinoid pharmacology and therapy in gut disorders

(2018) J.A. Uranga et al.   BIOCHEMICAL PHARMACOLOGY

Antibiotic Exposure and Reduced Short Chain Fatty Acid Production after Hematopoietic Stem Cell Transplant

(2018) Lindsey E. Romick-Rosendale et al.   BIOLOGY OF BLOOD AND MARROW TRANSPLANTATION

Effects of a 6-month multi-strain probiotics supplementation in endotoxemic, inflammatory and cardiometabolic status of T2DM patients: A randomized, double-blind, placebo-controlled trial

(2018) Shaun Sabico et al.   CLINICAL NUTRITION

Endocannabinoids in the treatment of gasytrointestinal inflammation and symptoms

(2018) Marcella Pesce et al.   CURRENT OPINION IN PHARMACOLOGY

The Perturbance of Microbiome and Gut-Brain Axis in Autism Spectrum Disorders

(2018) Greta Fowlie et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The dietary modification and treatment of intestinal Candida overgrowth – a pilot study

(2018) S. Otašević et al.   JOURNAL DE MYCOLOGIE MEDICALE

Environment dominates over host genetics in shaping human gut microbiota

(2018) Daphna Rothschild et al.   NATURE

You are what you eat: diet, health and the gut microbiota

(2018) Niv Zmora et al.   Nature Reviews Gastroenterology & Hepatology

The effect of a multispecies probiotic on microbiota composition in a clinical trial of patients with diarrhea-predominant irritable bowel syndrome

(2018) Keren Hod et al.   NEUROGASTROENTEROLOGY AND MOTILITY

Characterization of bacterial microbiota compositions along the intestinal tract in pigs and their interactions and functions

(2018) Daniel Crespo-Piazuelo et al.   Scientific Reports

OUP accepted manuscript

(2018)   Advances in Nutrition

LDL-C Does Not Cause Cardiovascular Disease: a comprehensive review of current literature

(2018) Uffe Ravnskov et al.   Expert Review of Clinical Pharmacology

Association between Cigarette Smoking Status and Composition of Gut Microbiota: Population-Based Cross-Sectional Study

(2018) Su Hwan Lee et al.   Journal of Clinical Medicine

Microbial fermentation of flaxseed fibers modulates the transcriptome of GPR41-expressing enteroendocrine cells and protects mice against diet-induced obesity

(2018) Tulika Arora et al.   AMERICAN JOURNAL OF PHYSIOLOGY-ENDOCRINOLOGY AND METABOLISM

Noninvasive biomarkers of gut barrier function identify two subtypes of patients suffering from diarrhoea predominant-IBS: a case-control study

(2018) Michele Linsalata et al.   BMC GASTROENTEROLOGY

US Immigration Westernizes the Human Gut Microbiome

(2018) Pajau Vangay et al.   CELL

A next generation probiotic, Akkermansia muciniphila

(2018) Qixiao Zhai et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

l-Carnitine in omnivorous diets induces an atherogenic gut microbial pathway in humans

(2018) Robert A. Koeth et al.   JOURNAL OF CLINICAL INVESTIGATION

Baseline and on-statin treatment lipoprotein(a) levels for prediction of cardiovascular events: individual patient-data meta-analysis of statin outcome trials

(2018) Peter Willeit et al.   LANCET

Probiotics in irritable bowel syndrome: Where are we?

(2018) Giovanni Barbara et al.   NEUROGASTROENTEROLOGY AND MOTILITY

Colonocyte metabolism shapes the gut microbiota

(2018) Yael Litvak et al.   SCIENCE

The gut microbiota at the intersection of diet and human health

(2018) Christopher L. Gentile et al.   SCIENCE

The Therapeutic Effect of a Multistrain Probiotic on Diarrhea-Predominant Irritable Bowel Syndrome: A Pilot Study

(2018) Seok-Hoon Lee et al.   Gastroenterology Research and Practice

Effects of a low carbohydrate diet on energy expenditure during weight loss maintenance: randomized trial

(2018) Cara B Ebbeling et al.   BMJ-British Medical Journal

Microbiome—The Missing Link in the Gut-Brain Axis: Focus on Its Role in Gastrointestinal and Mental Health

(2018) Karolina Skonieczna-Żydecka et al.   Journal of Clinical Medicine

Characterization of the human DNA gut virome across populations with different subsistence strategies and geographical origin

(2017) Simone Rampelli et al.   ENVIRONMENTAL MICROBIOLOGY

Low-density lipoproteins cause atherosclerotic cardiovascular disease. 1. Evidence from genetic, epidemiologic, and clinical studies. A consensus statement from the European Atherosclerosis Society Consensus Panel

(2017) Brian A. Ference et al.   EUROPEAN HEART JOURNAL

Prebiotics Reduce Body Fat and Alter Intestinal Microbiota in Children Who Are Overweight or With Obesity

(2017) Alissa C. Nicolucci et al.   GASTROENTEROLOGY

Diet as a Trigger or Therapy for Inflammatory Bowel Diseases

(2017) James D. Lewis et al.   GASTROENTEROLOGY

Butyrate reduces appetite and activates brown adipose tissue via the gut-brain neural circuit

(2017) Zhuang Li et al.   GUT

European consensus conference on faecal microbiota transplantation in clinical practice

(2017) Giovanni Cammarota et al.   GUT

A randomised trial of the effect of omega-3 polyunsaturated fatty acid supplements on the human intestinal microbiota

(2017) Henry Watson et al.   GUT

Effect of Butyrate and Inulin Supplementation on Glycemic Status, Lipid Profile and Glucagon-Like Peptide 1 Level in Patients with Type 2 Diabetes: A Randomized Double-Blind, Placebo-Controlled Trial

(2017) Neda Roshanravan et al.   HORMONE AND METABOLIC RESEARCH

Bifidobacterium adolescentis Exerts Strain-Specific Effects on Constipation Induced by Loperamide in BALB/c Mice

(2017) Linlin Wang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Impact of Omega-3 Fatty Acids on the Gut Microbiota

(2017) Lara Costantini et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Effects of Non-Starch Polysaccharides on Inflammatory Bowel Disease

(2017) Ying Nie et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Gut microbiome diversity and high-fibre intake are related to lower long-term weight gain

(2017) C Menni et al.   INTERNATIONAL JOURNAL OF OBESITY

Association Between Dietary Factors and Mortality From Heart Disease, Stroke, and Type 2 Diabetes in the United States

(2017) Renata Micha et al.   JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION

Are Short Chain Fatty Acids in Gut Microbiota Defensive Players for Inflammation and Atherosclerosis?

(2017) Hideo Ohira et al.   Journal of Atherosclerosis and Thrombosis

Meta-analysis: proton pump inhibitors moderately increase the risk of small intestinal bacterial overgrowth

(2017) Tingting Su et al.   JOURNAL OF GASTROENTEROLOGY

Health Benefits of Fiber Fermentation

(2017) Wendy J. Dahl et al.   JOURNAL OF THE AMERICAN COLLEGE OF NUTRITION

Influence of diet on the gut microbiome and implications for human health

(2017) Rasnik K. Singh et al.   Journal of Translational Medicine

Microbial Ecology along the Gastrointestinal Tract

(2017) Ethan T. Hillman et al.   MICROBES AND ENVIRONMENTS

Beneficial effects on host energy metabolism of short-chain fatty acids and vitamins produced by commensal and probiotic bacteria

(2017) Jean Guy LeBlanc et al.   Microbial Cell Factories

Metformin alters the gut microbiome of individuals with treatment-naive type 2 diabetes, contributing to the therapeutic effects of the drug

(2017) Hao Wu et al.   NATURE MEDICINE

Interaction Between Atypical Antipsychotics and the Gut Microbiome in a Bipolar Disease Cohort

(2017) Stephanie A. Flowers et al.   PHARMACOTHERAPY

Diet-driven microbiota dysbiosis is associated with vagal remodeling and obesity

(2017) Tanusree Sen et al.   PHYSIOLOGY & BEHAVIOR

Probiotic treatment reduces depressive-like behaviour in rats independently of diet

(2017) Anders Abildgaard et al.   PSYCHONEUROENDOCRINOLOGY

Microbiota-activated PPAR-γ signaling inhibits dysbiotic Enterobacteriaceae expansion

(2017) Mariana X. Byndloss et al.   SCIENCE

Proton pump inhibitors therapy and risk of Clostridium difficile infection: Systematic review and meta-analysis

(2017) Anca Trifan et al.   WORLD JOURNAL OF GASTROENTEROLOGY

Strain-specific probiotic properties of lactic acid bacteria and their interference with human intestinal pathogens invasion

(2017) Raffaella Campana et al.   Gut Pathogens

Adherence to Mediterranean Diet and Risk of Cancer: An Updated Systematic Review and Meta-Analysis

(2017) Lukas Schwingshackl et al.   Nutrients

Precision Nutrition: A Review of Personalized Nutritional Approaches for the Prevention and Management of Metabolic Syndrome

(2017) Juan de Toro-Martín et al.   Nutrients

Evidence of the Anti-Inflammatory Effects of Probiotics and Synbiotics in Intestinal Chronic Diseases

(2017) Julio Plaza-Díaz et al.   Nutrients

Effects of Probiotics, Prebiotics, and Synbiotics on Human Health

(2017) et al.   Nutrients

Effects of Ketogenic Diets on Cardiovascular Risk Factors: Evidence from Animal and Human Studies

(2017) Christophe Kosinski et al.   Nutrients

The effects of probiotics on depressive symptoms in humans: a systematic review

(2017) Caroline J. K. Wallace et al.   Annals of General Psychiatry

A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients

(2017) Andrew Brantley Hall et al.   Genome Medicine

Bifidobacterium brevereduces apoptotic epithelial cell shedding in an exopolysaccharide and MyD88-dependent manner

(2017) K. R. Hughes et al.   Open Biology

Extreme genome diversity in the hyper-prevalent parasitic eukaryote Blastocystis

(2017) Eleni Gentekaki et al.   PLOS BIOLOGY

Sugar industry sponsorship of germ-free rodent studies linking sucrose to hyperlipidemia and cancer: An historical analysis of internal documents

(2017) Cristin E. Kearns et al.   PLOS BIOLOGY

Regulation of life span by the gut microbiota in the short-lived African turquoise killifish

(2017) Patrick Smith et al.   eLife

Reduced Mass and Diversity of the Colonic Microbiome in Patients with Multiple Sclerosis and Their Improvement with Ketogenic Diet

(2017) Alexander Swidsinski et al.   Frontiers in Microbiology

Gut Microbiota-Dependent Metabolite Trimethylamine N-Oxide Contributes to Cardiac Dysfunction in Western Diet-Induced Obese Mice

(2017) Kui Chen et al.   Frontiers in Physiology

Fiber supplements and clinically proven health benefits

(2017) Kellen V. Lambeau et al.   Journal of the American Association of Nurse Practitioners

Potential Effects of Horizontal Gene Exchange in the Human Gut

(2017) Aaron Lerner et al.   Frontiers in Immunology

Efficacy and Safety of a Multistrain Probiotic Formulation Depends from Manufacturing

(2017) Vito Trinchieri et al.   Frontiers in Immunology

Leaky Gut As a Danger Signal for Autoimmune Diseases

(2017) Qinghui Mu et al.   Frontiers in Immunology

New evidences on the altered gut microbiota in autism spectrum disorders

(2017) Francesco Strati et al.   Microbiome

Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study

(2017) Dae-Wook Kang et al.   Microbiome

Uncovering the trimethylamine-producing bacteria of the human gut microbiota

(2017) Silke Rath et al.   Microbiome

Interplay between Lactobacillus rhamnosus GG and Candida and the involvement of exopolysaccharides

(2017) Camille N. Allonsius et al.   Microbial Biotechnology

Fiber-utilizing capacity varies in Prevotella- versus Bacteroides-dominated gut microbiota

(2017) Tingting Chen et al.   Scientific Reports

Colonic infusions of short-chain fatty acid mixtures promote energy metabolism in overweight/obese men: a randomized crossover trial

(2017) Emanuel E. Canfora et al.   Scientific Reports

Omega-3 fatty acids correlate with gut microbiome diversity and production of N-carbamylglutamate in middle aged and elderly women

(2017) Cristina Menni et al.   Scientific Reports

High red meat intake and all-cause cardiovascular and cancer mortality: is the risk modified by fruit and vegetable intake?

(2016) Andrea Bellavia et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Gut Microbiota, Inflammation, and Colorectal Cancer

(2016) Caitlin A. Brennan et al.   Annual Review of Microbiology

Prebiotics: Definition and protective mechanisms

(2016) Rosica Valcheva et al.   BEST PRACTICE & RESEARCH IN CLINICAL GASTROENTEROLOGY

Metabolic endotoxemia with obesity: Is it real and is it relevant?

(2016) Nabil E. Boutagy et al.   BIOCHIMIE

Small intestinal bacterial overgrowth is associated with irritable bowel syndrome and is independent of proton pump inhibitor usage

(2016) Evangelos J. Giamarellos-Bourboulis et al.   BMC GASTROENTEROLOGY

Faecal short-chain fatty acids - a diagnostic biomarker for irritable bowel syndrome?

(2016) Per G. Farup et al.   BMC GASTROENTEROLOGY

Host–microbiome interactions in human type 2 diabetes following prebiotic fibre (galacto-oligosaccharide) intake

(2016) Camilla Pedersen et al.   BRITISH JOURNAL OF NUTRITION

Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson’s Disease

(2016) Timothy R. Sampson et al.   CELL

Intestinal REG3 Lectins Protect against Alcoholic Steatohepatitis by Reducing Mucosa-Associated Microbiota and Preventing Bacterial Translocation

(2016) Lirui Wang et al.   Cell Host & Microbe

The influence of non-steroidal anti-inflammatory drugs on the gut microbiome

(2016) M.A.M. Rogers et al.   CLINICAL MICROBIOLOGY AND INFECTION

Should apolipoprotein B replace LDL cholesterol as therapeutic targets are lowered?

(2016) Jeffrey W. Meeusen et al.   CURRENT OPINION IN LIPIDOLOGY

Metformin Is Associated With Higher Relative Abundance of Mucin-DegradingAkkermansia muciniphilaand Several Short-Chain Fatty Acid–Producing Microbiota in the Gut

(2016) Jacobo de la Cuesta-Zuluaga et al.   DIABETES CARE

Physiological Role of Gut Microbiota for Maintaining Human Health

(2016) Akira Andoh   DIGESTION

Bowel Disorders

(2016) Brian E. Lacy et al.   GASTROENTEROLOGY

Irritable Bowel Syndrome, Particularly the Constipation-Predominant Form, Involves an Increase in Methanobrevibacter smithii, Which Is Associated with Higher Methane Production

(2016) Ujjala Ghoshal et al.   Gut and Liver

British Dietetic Association systematic review and evidence-based practice guidelines for the dietary management of irritable bowel syndrome in adults (2016 update)

(2016) Y. A. McKenzie et al.   JOURNAL OF HUMAN NUTRITION AND DIETETICS

Effect of proton pump inhibitors and antibiotics on the gut microbiome of hospitalised older persons

(2016) Caoilfhionn O'Donoghue et al.   JOURNAL OF INFECTION

Probiotics, gut microbiota, and their influence on host health and disease

(2016) Borja Sánchez et al.   MOLECULAR NUTRITION & FOOD RESEARCH

Acetate mediates a microbiome–brain–β-cell axis to promote metabolic syndrome

(2016) Rachel J. Perry et al.   NATURE

Diet–microbiota interactions as moderators of human metabolism

(2016) Justin L. Sonnenburg et al.   NATURE

Role of the gut microbiota in host appetite control: bacterial growth to animal feeding behaviour

(2016) Sergueï O. Fetissov   Nature Reviews Endocrinology

Benefits of short-chain fatty acids and their receptors in inflammation and carcinogenesis

(2016) Sathish Sivaprakasam et al.   PHARMACOLOGY & THERAPEUTICS

Antibiotic use and its consequences for the normal microbiome

(2016) Martin J. Blaser   SCIENCE

Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity

(2016) Alexandra Zhernakova et al.   SCIENCE

Population-level analysis of gut microbiome variation

(2016) Gwen Falony et al.   SCIENCE

Psychobiotics and the Manipulation of Bacteria–Gut–Brain Signals

(2016) Amar Sarkar et al.   TRENDS IN NEUROSCIENCES

Fungi in the healthy human gastrointestinal tract

(2016) Heather E. Hallen-Adams et al.   Virulence

Bifidobacteria and Their Role as Members of the Human Gut Microbiota

(2016) Amy O'Callaghan et al.   Frontiers in Microbiology

Intestinal Microbiota‐Generated Metabolite Trimethylamine‐N‐Oxide and 5‐Year Mortality Risk in Stable Coronary Artery Disease: The Contributory Role of Intestinal Microbiota in a COURAGE‐Like Patient Cohort

(2016) Vichai Senthong et al.   Journal of the American Heart Association

Probiotics modify tight-junction proteins in an animal model of nonalcoholic fatty liver disease

(2016) David Briskey et al.   Therapeutic Advances in Gastroenterology

GPR41 and GPR43 in Obesity and Inflammation – Protective or Causative?

(2016) Zhiwei Ang et al.   Frontiers in Immunology

Colonization with the enteric protozoa Blastocystis is associated with increased diversity of human gut bacterial microbiota

(2016) Christophe Audebert et al.   Scientific Reports

Review article: dietary fibre-microbiota interactions

(2015) H. L. Simpson et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

Intestinal Microbiota And Diet in IBS: Causes, Consequences, or Epiphenomena?

(2015) Mirjana Rajilić-Stojanović et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

Dietary Fibre and the Risk of Colorectal Cancer: a Case-Control Study

(2015) Y Song et al.   Asian Pacific Journal of Cancer Prevention

Gut Microbiota Orchestrates Energy Homeostasis during Cold

(2015) Claire Chevalier et al.   CELL

Disease-Specific Alterations in the Enteric Virome in Inflammatory Bowel Disease

(2015) Jason M. Norman et al.   CELL

Personalized Nutrition by Prediction of Glycemic Responses

(2015) David Zeevi et al.   CELL

Non-lethal Inhibition of Gut Microbial Trimethylamine Production for the Treatment of Atherosclerosis

(2015) Zeneng Wang et al.   CELL

Inflammation, Antibiotics, and Diet as Environmental Stressors of the Gut Microbiome in Pediatric Crohn’s Disease

(2015) James D. Lewis et al.   Cell Host & Microbe

The Gut Microbiome Contributes to a Substantial Proportion of the Variation in Blood LipidsNovelty and Significance

(2015) Jingyuan Fu et al.   CIRCULATION RESEARCH

Gut microbiota and probiotics: Focus on diabetes mellitus

(2015) Livia Bordalo Tonucci et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

A comprehensive meta-analysis on evidence of Mediterranean diet and cardiovascular disease: Are individual components equal?

(2015) Giuseppe Grosso et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

MIG1 Regulates Resistance of Candida albicans against the Fungistatic Effect of Weak Organic Acids

(2015) Fabien Cottier et al.   EUKARYOTIC CELL

Nonceliac Gluten Sensitivity

(2015) Alessio Fasano et al.   GASTROENTEROLOGY

Proton pump inhibitors affect the gut microbiome

(2015) Floris Imhann et al.   GUT

Akkermansia muciniphilaand improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology

(2015) Maria Carlota Dao et al.   GUT

Stool consistency is strongly associated with gut microbiota richness and composition, enterotypes and bacterial growth rates

(2015) Doris Vandeputte et al.   GUT

High-level adherence to a Mediterranean diet beneficially impacts the gut microbiota and associated metabolome

(2015) Francesca De Filippis et al.   GUT

Coculture of Escherichia coli O157:H7 with a Nonpathogenic E. coli Strain Increases Toxin Production and Virulence in a Germfree Mouse Model

(2015) Kakolie Goswami et al.   INFECTION AND IMMUNITY

Recommendations for Probiotic Use—2015 Update

(2015) Martin H. Floch et al.   JOURNAL OF CLINICAL GASTROENTEROLOGY

Prebiotic Effects of a Novel Combination of Galactooligosaccharides and Maltodextrins

(2015) Sarka Musilova et al.   JOURNAL OF MEDICINAL FOOD

Red Meat and Colorectal Cancer: A Quantitative Update on the State of the Epidemiologic Science

(2015) Dominik D. Alexander et al.   JOURNAL OF THE AMERICAN COLLEGE OF NUTRITION

Dietary emulsifiers impact the mouse gut microbiota promoting colitis and metabolic syndrome

(2015) Benoit Chassaing et al.   NATURE

Gut microbiota and aging

(2015) P. W. OToole et al.   SCIENCE

Role of the normal gut microbiota

(2015) Sai Manasa Jandhyala   WORLD JOURNAL OF GASTROENTEROLOGY

Dietary Gut Microbial Metabolites, Short-chain Fatty Acids, and Host Metabolic Regulation

(2015) Mayu Kasubuchi et al.   Nutrients

The Specific Carbohydrate Diet for Inflammatory Bowel Disease: A Case Series

(2015) Samir Kakodkar et al.   Journal of the Academy of Nutrition and Dietetics

Use of the second-generation antipsychotic, risperidone and secondary weight gain are associated with an altered gut microbiota in children

(2015) S M Bahr et al.   Translational Psychiatry

Prevention of Diet-Induced Obesity Effects on Body Weight and Gut Microbiota in Mice Treated Chronically with Δ9-Tetrahydrocannabinol

(2015) Nina L. Cluny et al.   PLoS One

Efficacy of Prebiotics, Probiotics and Synbiotics in Irritable Bowel Syndrome and Chronic Idiopathic Constipation: Systematic Review and Meta-analysis

(2014) Alexander C Ford et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

Perspectives on the therapeutic potential of short-chain fatty acid receptors

(2014) Sunhong Kim et al.   BMB Reports

Diet and Feeding Pattern Affect the Diurnal Dynamics of the Gut Microbiome

(2014) Amir Zarrinpar et al.   Cell Metabolism

Diets that differ in their FODMAP content alter the colonic luminal microenvironment

(2014) Emma P Halmos et al.   GUT

A polyphenol-rich cranberry extract protects from diet-induced obesity, insulin resistance and intestinal inflammation in association with increasedAkkermansiaspp. population in the gut microbiota of mice

(2014) Fernando F Anhê et al.   GUT

Diet, Metabolites, and “Western-Lifestyle” Inflammatory Diseases

(2014) Alison N. Thorburn et al.   IMMUNITY

Activation of Gpr109a, Receptor for Niacin and the Commensal Metabolite Butyrate, Suppresses Colonic Inflammation and Carcinogenesis

(2014) Nagendra Singh et al.   IMMUNITY

Transmission of Atherosclerosis Susceptibility with Gut Microbial Transplantation

(2014) Jill C. Gregory et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Modulation of Fecal Clostridiales Bacteria and Butyrate by Probiotic Intervention with Lactobacillus paracasei DG Varies among Healthy Adults

(2014) Chiara Ferrario et al.   JOURNAL OF NUTRITION

Artificial sweeteners induce glucose intolerance by altering the gut microbiota

(2014) Jotham Suez et al.   NATURE

Gut microbiota metabolism of dietary fiber influences allergic airway disease and hematopoiesis

(2014) Aurélien Trompette et al.   NATURE MEDICINE

The International Scientific Association for Probiotics and Prebiotics consensus statement on the scope and appropriate use of the term probiotic

(2014) Colin Hill et al.   Nature Reviews Gastroenterology & Hepatology

Seasonal Variation in Human Gut Microbiome Composition

(2014) Emily R. Davenport et al.   PLoS One

Intestinal microbiota in health and disease: Role of bifidobacteria in gut homeostasis

(2014) Rafael Tojo   WORLD JOURNAL OF GASTROENTEROLOGY

Colorectal cancer in inflammatory bowel disease: The risk, pathogenesis, prevention and diagnosis

(2014) Eun Ran Kim   WORLD JOURNAL OF GASTROENTEROLOGY

The Impact of Diet and Lifestyle on Gut Microbiota and Human Health

(2014) Michael Conlon et al.   Nutrients

Understanding gut microbiota in elderly's health will enable intervention through probiotics

(2014) G. Pérez Martínez et al.   Beneficial Microbes

Microorganisms with Claimed Probiotic Properties: An Overview of Recent Literature

(2014) Sabina Fijan   International Journal of Environmental Research and Public Health

Adiposity, gut microbiota and faecal short chain fatty acids are linked in adult humans

(2014) J Fernandes et al.   Nutrition & Diabetes

Fecal Biomarkers of Intestinal Health and Disease in Children

(2014) Tamara Pang et al.   Frontiers in Pediatrics

Immune Activation in Irritable Bowel Syndrome: Can Neuroimmune Interactions Explain Symptoms?

(2013) Patrick A Hughes et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

In vitro fermentation of prebiotic oligosaccharides by Bifidobacterium lactis HN019 and Lactobacillus spp.

(2013) Ian M. Sims et al.   ANAEROBE

Antibiotic Administration Routes Significantly Influence the Levels of Antibiotic Resistance in Gut Microbiota

(2013) Lu Zhang et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Effect of Lactobacillus rhamnosus CGMCC1.3724 supplementation on weight loss and maintenance in obese men and women

(2013) Marina Sanchez et al.   BRITISH JOURNAL OF NUTRITION

Effect of Lactobacillus gasseri SBT2055 in fermented milk on abdominal adiposity in adults in a randomised controlled trial

(2013) Yukio Kadooka et al.   BRITISH JOURNAL OF NUTRITION

No Effects of Gluten in Patients With Self-Reported Non-Celiac Gluten Sensitivity After Dietary Reduction of Fermentable, Poorly Absorbed, Short-Chain Carbohydrates

(2013) Jessica R. Biesiekierski et al.   GASTROENTEROLOGY

Effect of Probiotics on Inducing Remission and Maintaining Therapy in Ulcerative Colitis, Crohnʼs Disease, and Pouchitis

(2013) Jun Shen et al.   INFLAMMATORY BOWEL DISEASES

Non–High-Density Lipoprotein Cholesterol, Guideline Targets, and Population Percentiles for Secondary Prevention in 1.3 Million Adults

(2013) Mohamed B. Elshazly et al.   JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY

Richness of human gut microbiome correlates with metabolic markers

(2013) Emmanuelle Le Chatelier et al.   NATURE

Dietary intervention impact on gut microbial gene richness

(2013) Aurélie Cotillard et al.   NATURE

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

Intestinal microbiota metabolism of l-carnitine, a nutrient in red meat, promotes atherosclerosis

(2013) Robert A Koeth et al.   NATURE MEDICINE

Intestinal Microbial Metabolism of Phosphatidylcholine and Cardiovascular Risk

(2013) W.H. Wilson Tang et al.   NEW ENGLAND JOURNAL OF MEDICINE

Morphine Induces Bacterial Translocation in Mice by Compromising Intestinal Barrier Function in a TLR-Dependent Manner

(2013) Jingjing Meng et al.   PLoS One

Archaea and Fungi of the Human Gut Microbiome: Correlations with Diet and Bacterial Residents

(2013) Christian Hoffmann et al.   PLoS One

High-Fat Diet Reduces the Formation of Butyrate, but Increases Succinate, Inflammation, Liver Fat and Cholesterol in Rats, while Dietary Fibre Counteracts These Effects

(2013) Greta Jakobsdottir et al.   PLoS One

Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity

(2013) A. Everard et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Host-Derived Nitrate Boosts Growth of E. coli in the Inflamed Gut

(2013) S. E. Winter et al.   SCIENCE

Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice

(2013) V. K. Ridaura et al.   SCIENCE

Conserved Shifts in the Gut Microbiota Due to Gastric Bypass Reduce Host Weight and Adiposity

(2013) A. P. Liou et al.   Science Translational Medicine

Gut–brain axis: how the microbiome influences anxiety and depression

(2013) Jane A. Foster et al.   TRENDS IN NEUROSCIENCES

Cohabiting family members share microbiota with one another and with their dogs

(2013) Se Jin Song et al.   eLife

Gut microbiota composition correlates with diet and health in the elderly

(2012) Marcus J. Claesson et al.   NATURE

A metagenome-wide association study of gut microbiota in type 2 diabetes

(2012) Junjie Qin et al.   NATURE

Increased Gut Permeability and Microbiota Change Associate with Mesenteric Fat Inflammation and Metabolic Dysfunction in Diet-Induced Obese Mice

(2012) Yan Y. Lam et al.   PLoS One

New Insights into Blastocystis spp.: A Potential Link with Irritable Bowel Syndrome

(2012) Philippe Poirier et al.   PLoS Pathogens

The Ketogenic Diet as a Treatment Paradigm for Diverse Neurological Disorders

(2012) Carl E. Stafstrom et al.   Frontiers in Pharmacology

Low-carbohydrate diet scores and risk of type 2 diabetes in men

(2011) Lawrence de Koning et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Obesity and Cannabis Use: Results From 2 Representative National Surveys

(2011) Yann Le Strat et al.   AMERICAN JOURNAL OF EPIDEMIOLOGY

Lactobacillus rhamnosus GG Treatment Potentiates Intestinal Hypoxia-Inducible Factor, Promotes Intestinal Integrity and Ameliorates Alcohol-Induced Liver Injury

(2011) Yuhua Wang et al.   AMERICAN JOURNAL OF PATHOLOGY

Global and Deep Molecular Analysis of Microbiota Signatures in Fecal Samples From Patients With Irritable Bowel Syndrome

(2011) Mirjana Rajilić–Stojanović et al.   GASTROENTEROLOGY

Subtypes of irritable bowel syndrome on Rome III criteria: A multicenter study

(2011) Xin Yao et al.   JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY

Gut flora metabolism of phosphatidylcholine promotes cardiovascular disease

(2011) Zeneng Wang et al.   NATURE

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

Cannabidiol Reduces Intestinal Inflammation through the Control of Neuroimmune Axis

(2011) Daniele De Filippis et al.   PLoS One

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

Potential Association Between the Oral Tetracycline Class of Antimicrobials Used to Treat Acne and Inflammatory Bowel Disease

(2010) David J Margolis et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

Red and Processed Meat Consumption and Risk of Incident Coronary Heart Disease, Stroke, and Diabetes Mellitus

(2010) Renata Micha et al.   CIRCULATION

Differential Adaptation of Human Gut Microbiota to Bariatric Surgery-Induced Weight Loss: Links With Metabolic and Low-Grade Inflammation Markers

(2010) J.-P. Furet et al.   DIABETES

The endocannabinoid system links gut microbiota to adipogenesis

(2010) Giulio G Muccioli et al.   Molecular Systems Biology

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

Lifestyle-related disease in Crohn’s disease: Relapse prevention by a semi-vegetarian diet

(2010) Mitsuro Chiba   WORLD JOURNAL OF GASTROENTEROLOGY

Elevated Human β-Defensin-2 Levels Indicate an Activation of the Innate Immune System in Patients With Irritable Bowel Syndrome

(2009) Jost Langhorst et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

Human gut microbiota in obesity and after gastric bypass

(2009) H. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lipids, Apolipoproteins, and Their Ratios in Relation to Cardiovascular Events With Statin Treatment

(2008) John J.P. Kastelein et al.   CIRCULATION

History of the ketogenic diet

(2008) James W. Wheless   EPILEPSIA

A core gut microbiome in obese and lean twins

(2008) Peter J. Turnbaugh et al.   NATURE