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Title
Advances in Ex Situ Tissue Optical Clearing
Authors
Keywords
-
Journal
Laser & Photonics Reviews
Volume -, Issue -, Pages 1800292
Publisher
Wiley
Online
2019-07-15
DOI
10.1002/lpor.201800292
References
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- (2019) Yu Sato et al. ANATOMICAL SCIENCE INTERNATIONAL
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- (2019) Shinji Urata et al. eLife
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- (2019) Yisong Qi et al. Science Advances
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- (2019) Mariana Diales Rocha et al. Frontiers in Neuroanatomy
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- (2019) Gleison D. P. Bossolani et al. NEUROGASTROENTEROLOGY AND MOTILITY
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- (2019) Esther I. Verhoef et al. MODERN PATHOLOGY
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- (2019) Esther I. Verhoef et al. HISTOPATHOLOGY
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- (2019) Yating Yi et al. CELL PROLIFERATION
- Hydrogel-Tissue Chemistry: Principles and Applications
- (2018) Viviana Gradinaru et al. Annual Review of Biophysics
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- (2018) Kohei Togami et al. BIOLOGICAL & PHARMACEUTICAL BULLETIN
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- (2018) Nobuyuki Tanaka et al. BRITISH JOURNAL OF CANCER
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- (2018) Jingyi Chi et al. Cell Metabolism
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- (2018) Dian Jing et al. CELL RESEARCH
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- (2018) David Twapokera Mzinza et al. Cellular & Molecular Immunology
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- (2015) Eunjoo Song et al. Biomedical Optics Express
- A versatile clearing agent for multi-modal brain imaging
- (2015) Irene Costantini et al. Scientific Reports
- High-resolution in-depth imaging of optically cleared thick samples using an adaptive SPIM
- (2015) Aurore Masson et al. Scientific Reports
- PEA-CLARITY: 3D molecular imaging of whole plant organs
- (2015) William M. Palmer et al. Scientific Reports
- 3-D Imaging Reveals Participation of Donor Islet Schwann Cells and Pericytes in Islet Transplantation and Graft Neurovascular Regeneration
- (2015) Jyuhn-Huarng Juang et al. EBioMedicine
- Optical Clearing in Dense Connective Tissues to Visualize Cellular Connectivity In Situ
- (2015) Sarah Calve et al. PLoS One
- A Rapid Optical Clearing Protocol Using 2,2′-Thiodiethanol for Microscopic Observation of Fixed Mouse Brain
- (2015) Yuka Aoyagi et al. PLoS One
- Fluorescent-Protein Stabilization and High-Resolution Imaging of Cleared, Intact Mouse Brains
- (2015) Martin K. Schwarz et al. PLoS One
- Dietary Phosphorus Overload Aggravates the Phenotype of the Dystrophin-Deficient mdx Mouse
- (2014) Eiji Wada et al. AMERICAN JOURNAL OF PATHOLOGY
- Protein kinase G increases antioxidant function in lung microvascular endothelial cells by inhibiting the c-Abl tyrosine kinase
- (2014) R. Scott Stephens et al. AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY
- Tissue Optical Clearing, Three-Dimensional Imaging, and Computer Morphometry in Whole Mouse Lungs and Human Airways
- (2014) Gregory D. Scott et al. AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY
- Clearing pigmented insect cuticle to investigate small insects' organs in situ using confocal laser-scanning microscopy (CLSM)
- (2014) Marco Smolla et al. ARTHROPOD STRUCTURE & DEVELOPMENT
- Improved application of the electrophoretic tissue clearing technology, CLARITY, to intact solid organs including brain, pancreas, liver, kidney, lung, and intestine
- (2014) Hyunsu Lee et al. BMC DEVELOPMENTAL BIOLOGY
- Whole-Brain Imaging with Single-Cell Resolution Using Chemical Cocktails and Computational Analysis
- (2014) Etsuo A. Susaki et al. CELL
- Single-Cell Phenotyping within Transparent Intact Tissue through Whole-Body Clearing
- (2014) Bin Yang et al. CELL
- iDISCO: A Simple, Rapid Method to Immunolabel Large Tissue Samples for Volume Imaging
- (2014) Nicolas Renier et al. CELL
- Whole-Body Imaging with Single-Cell Resolution by Tissue Decolorization
- (2014) Kazuki Tainaka et al. CELL
- Simplified method to perform CLARITY imaging
- (2014) Ekaterina Poguzhelskaya et al. Molecular Neurodegeneration
- Advanced CLARITY for rapid and high-resolution imaging of intact tissues
- (2014) Raju Tomer et al. Nature Protocols
- Dynamic monitoring of optical clearing of skin using photoacoustic microscopy and ultrasonography
- (2014) Xiaoquan Yang et al. OPTICS EXPRESS
- High-Resolution, 2- and 3-Dimensional Imaging of Uncut, Unembedded Tissue Biopsy Samples
- (2013) Richard Torres et al. ARCHIVES OF PATHOLOGY & LABORATORY MEDICINE
- ClearT: a detergent- and solvent-free clearing method for neuronal and non-neuronal tissue
- (2013) T. Kuwajima et al. DEVELOPMENT
- Plasticity of Schwann cells and pericytes in response to islet injury in mice
- (2013) Shiue-Cheng Tang et al. DIABETOLOGIA
- Three-dimensional evaluation of retinal ganglion cell axon regeneration and pathfinding in whole mouse tissue after injury
- (2013) Xueting Luo et al. EXPERIMENTAL NEUROLOGY
- 3D-ultramicroscopy utilizing aspheric optics
- (2013) Saiedeh Saghafi et al. Journal of Biophotonics
- Recent progress in tissue optical clearing
- (2013) Dan Zhu et al. Laser & Photonics Reviews
- Structural and molecular interrogation of intact biological systems
- (2013) Kwanghun Chung et al. NATURE
- SeeDB: a simple and morphology-preserving optical clearing agent for neuronal circuit reconstruction
- (2013) Meng-Tsen Ke et al. NATURE NEUROSCIENCE
- 3-D imaging, illustration, and quantitation of enteric glial network in transparent human colon mucosa
- (2013) Y. A. Liu et al. NEUROGASTROENTEROLOGY AND MOTILITY
- 3-D Visualization and Quantitation of Microvessels in Transparent Human Colorectal Carcinoma
- (2013) Yuan-An Liu et al. PLoS One
- Misguidance and modulation of axonal regeneration by Stat3 and Rho/ROCK signaling in the transparent optic nerve
- (2013) V Pernet et al. Cell Death & Disease
- Integration of ultra-high field MRI and histology for connectome based research of brain disorders
- (2013) Shan Yang et al. Frontiers in Neuroanatomy
- Extended Stokes Shift in Fluorescent Proteins: Chromophore–Protein Interactions in a Near-Infrared TagRFP675 Variant
- (2013) Kiryl D. Piatkevich et al. Scientific Reports
- The past, present, and future of AJP-Cell
- (2012) Paul A. Insel AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY
- 3-D imaging and illustration of the perfusive mouse islet sympathetic innervation and its remodelling in injury
- (2012) Y.-C. Chiu et al. DIABETOLOGIA
- Histo-Cytometry: A Method for Highly Multiplex Quantitative Tissue Imaging Analysis Applied to Dendritic Cell Subset Microanatomy in Lymph Nodes
- (2012) Michael Y. Gerner et al. IMMUNITY
- Mapping immune processes in intact tissues at cellular resolution
- (2012) Christian Brede et al. JOURNAL OF CLINICAL INVESTIGATION
- Three-dimensional imaging of solvent-cleared organs using 3DISCO
- (2012) Ali Ertürk et al. Nature Protocols
- Chemical Clearing and Dehydration of GFP Expressing Mouse Brains
- (2012) Klaus Becker et al. PLoS One
- Deep and Clear Optical Imaging of Thick Inhomogeneous Samples
- (2012) Raphael Jorand et al. PLoS One
- Irreversible optical clearing of rabbit dermis for autogenic corneal stroma transplantation
- (2011) Yuji Tanaka et al. BIOMATERIALS
- Three-dimensional imaging of the unsectioned adult spinal cord to assess axon regeneration and glial responses after injury
- (2011) Ali Ertürk et al. NATURE MEDICINE
- Scale: a chemical approach for fluorescence imaging and reconstruction of transparent mouse brain
- (2011) Hiroshi Hama et al. NATURE NEUROSCIENCE
- Vascular Labeling of Luminescent Gold Nanorods Enables 3-D Microscopy of Mouse Intestinal Capillaries
- (2010) Shiue-Cheng Tang et al. ACS Nano
- Irreversible optical clearing of sclera by dehydration and cross-linking
- (2010) Yuji Tanaka et al. BIOMATERIALS
- Global lymphoid tissue remodeling during a viral infection is orchestrated by a B cell-lymphotoxin-dependent pathway
- (2010) V. Kumar et al. BLOOD
- Three-dimensional optical method for integrated visualization of mouse islet microstructure and vascular network with subcellular-level resolution
- (2010) Ya-Yuan Fu et al. JOURNAL OF BIOMEDICAL OPTICS
- Molecular basis for optical clearing of collagenous tissues
- (2010) Jason M. Hirshburg et al. JOURNAL OF BIOMEDICAL OPTICS
- Optical clearing facilitates integrated 3D visualization of mouse ileal microstructure and vascular network with high definition
- (2010) Ya-Yuan Fu et al. MICROVASCULAR RESEARCH
- Structure and anatomy of the aortic root
- (2009) S. Y. Ho European Journal of Echocardiography
- Microtome-Free 3-Dimensional Confocal Imaging Method for Visualization of Mouse Intestine With Subcellular-Level Resolution
- (2009) Ya–Yuan Fu et al. GASTROENTEROLOGY
- Integration of optical clearing and optical sectioning microscopy for three-dimensional imaging of natural biomaterial scaffolds in thin sections
- (2009) S-ja Tseng et al. JOURNAL OF BIOMEDICAL OPTICS
- Preparation of wholemount mouse intestine for high-resolution three-dimensional imaging using two-photon microscopy
- (2009) P.L. APPLETON et al. JOURNAL OF MICROSCOPY
- Correlations of Neuronal and Microvascular Densities in Murine Cortex Revealed by Direct Counting and Colocalization of Nuclei and Vessels
- (2009) P. S. Tsai et al. JOURNAL OF NEUROSCIENCE
- Revisiting optical clearing with dimethyl sulfoxide (DMSO)
- (2009) Albert K. Bui et al. LASERS IN SURGERY AND MEDICINE
- Retention of polarization signatures in SHG microscopy of scattering tissues through optical clearing
- (2009) Oleg Nadiarnykh et al. OPTICS EXPRESS
- Studies of aberrant phyllotaxy1 Mutants of Maize Indicate Complex Interactions between Auxin and Cytokinin Signaling in the Shoot Apical Meristem
- (2009) B.-h. Lee et al. PLANT PHYSIOLOGY
- Optical clearing of unsectioned specimens for three-dimensional imaging via optical transmission and emission tomography
- (2008) Mark Oldham et al. JOURNAL OF BIOMEDICAL OPTICS
- Quantitative second harmonic generation imaging and modeling of the optical clearing mechanism in striated muscle and tendon
- (2008) Ronald LaComb et al. JOURNAL OF BIOMEDICAL OPTICS
- Nondestructive optical determination of fiber organization in intact myocardial wall
- (2008) Rebecca M. Smith et al. MICROSCOPY RESEARCH AND TECHNIQUE
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