Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use
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Title
Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use
Authors
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Journal
NUCLEIC ACIDS RESEARCH
Volume -, Issue -, Pages gkw530
Publisher
Oxford University Press (OUP)
Online
2016-07-20
DOI
10.1093/nar/gkw530
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- Cotranslational Targeting of XBP1 Protein to the Membrane Promotes Cytoplasmic Splicing of Its Own mRNA
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- A sequence element that tunes Escherichia coli tRNAAlaGGC to ensure accurate decoding
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- Recode-2: new design, new search tools, and many more genes
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- Codon Size Reduction as the Origin of the Triplet Genetic Code
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- Expression of the VP2 Protein of Murine Norovirus by a Translation Termination-Reinitiation Strategy
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- Triplex structures in an RNA pseudoknot enhance mechanical stability and increase efficiency of -1 ribosomal frameshifting
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- Connection between stop codon reassignment and frequent use of shifty stop frameshifting
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- Footprinting analysis of BWYV pseudoknot-ribosome complexes
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- A homogeneous cell-based bicistronic fluorescence assay for high-throughput identification of drugs that perturb viral gene recoding and read-through of nonsense stop codons
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- Analysis of the coding potential of the partially overlapping 3' ORF in segment 5 of the plant fijiviruses
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- A conserved predicted pseudoknot in the NS2A-encoding sequence of West Nile and Japanese encephalitis flaviviruses suggests NS1' may derive from ribosomal frameshifting
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- Bioinformatic evidence for a stem-loop structure 5'-adjacent to the IGR-IRES and for an overlapping gene in the bee paralysis dicistroviruses
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- Molecular characterisation of two novel double-stranded RNA elements from Phlebiopsis gigantea
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- Stem-loop structure of Cocksfoot mottle virus RNA is indispensable for programmed −1 ribosomal frameshifting
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- OAZ-t/OAZ3 Is Essential for Rigid Connection of Sperm Tails to Heads in Mouse
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- Complex Adaptations Can Drive the Evolution of the Capacitor [PSI+], Even with Realistic Rates of Yeast Sex
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- R -01, a New Family of Oxazolidinones That Overcome Ribosome-Based Linezolid Resistance
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- In vivo and in vitro expression analysis of the RNA-dependent RNA polymerase of Citrus tristeza virus
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- Complete nucleotide sequence and genome organization of pineapple mealybug wilt-associated virus-1
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- Antizyme 3 inhibits polyamine uptake and ornithine decarboxylase (ODC) activity, but does not stimulate ODC degradation
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- Ornithine decarboxylase antizyme finder (OAF): Fast and reliable detection of antizymes with frameshifts in mRNAs
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- PRFdb: A database of computationally predicted eukaryotic programmed -1 ribosomal frameshift signals
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- The mitochondrial genome of the hexactinellid sponge Aphrocallistes vastus: Evidence for programmed translational frameshifting
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- Translational bypassing without peptidyl-tRNA anticodon scanning of coding gap mRNA
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- Apical Loop-Internal Loop RNA Pseudoknots
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- Transcriptional slippage prompts recoding in alternate reading frames in the hepatitis C virus (HCV) core sequence from strain HCV-1
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- The use of the rare UUA codon to define “Expression Space” for genes involved in secondary metabolism, development and environmental adaptation in Streptomyces
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- Recoding of Translation in Turtle Mitochondrial Genomes: Programmed Frameshift Mutations and Evidence of a Modified Genetic Code
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- An Important Role for the Multienzyme Aminoacyl-tRNA Synthetase Complex in Mammalian Translation and Cell Growth
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- Spontaneous Intersubunit Rotation in Single Ribosomes
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- Quality control by the ribosome following peptide bond formation
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- Epigenetic control of polyamines by the prion [PSI+]
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- Lifeact: a versatile marker to visualize F-actin
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- KnotInFrame: prediction of −1 ribosomal frameshift events
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- A new kinetic model reveals the synergistic effect of E-, P- and A-sites on +1 ribosomal frameshifting
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- An overlapping essential gene in the Potyviridae
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- uORFs with unusual translational start codons autoregulate expression of eukaryotic ornithine decarboxylase homologs
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- The stimulatory RNA of the Visna-Maedi retrovirus ribosomal frameshifting signal is an unusual pseudoknot with an interstem element
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- Selection of peptides interfering with a ribosomal frameshift in the human immunodeficiency virus type 1
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- A role for the 30S subunit E site in maintenance of the translational reading frame
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- Rose spring dwarf-associated virus has RNA structural and gene-expression features like those of Barley yellow dwarf virus
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- Discovery of frameshifting in Alphavirus 6K resolves a 20-year enigma
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- Characterization of the Mechanical Unfolding of RNA Pseudoknots
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