A novel sweet potato potyvirus open reading frame (ORF) is expressed via polymerase slippage and suppresses RNA silencing

Transcriptional slippage in the positive-sense RNA virus family Potyviridae

(2015) A. Olspert et al.   EMBO REPORTS

RNA Polymerase Slippage as a Mechanism for the Production of Frameshift Gene Products in Plant Viruses of the Potyviridae Family

(2015) Bernardo Rodamilans et al.   JOURNAL OF VIROLOGY

Mapping overlapping functional elements embedded within the protein-coding regions of RNA viruses

(2014) Andrew E. Firth   NUCLEIC ACIDS RESEARCH

Rapid Evolution of Virus Sequences in Intrinsically Disordered Protein Regions

(2014) Leonid Gitlin et al.   PLoS Pathogens

Complete genome sequence of the original Taiwanese isolate of sweet potato latent virus and its relationship to other potyviruses infecting sweet potato

(2013) Mingqiang Wang et al.   ARCHIVES OF VIROLOGY

Analysis ofTomato spotted wilt virus NSs protein indicates the importance of the N-terminal domain for avirulence and RNA silencing suppression

(2013) Dryas de Ronde et al.   MOLECULAR PLANT PATHOLOGY

The influence ofcis-acting P1 protein and translational elements on the expression ofPotato virus Yhelper-component proteinase (HCPro) in heterologous systems and its suppression of silencing activity

(2013) Fátima Tena Fernández et al.   MOLECULAR PLANT PATHOLOGY

Interaction of the Microtubule-Associated Host Protein HIP2 with Viral Helper Component Proteinase Is Important in Infection with Potato virus A

(2013) Tuuli Haikonen et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Discriminative modelling of context-specific amino acid substitution probabilities

(2012) Christof Angermüller et al.   BIOINFORMATICS

Non-canonical translation in RNA viruses

(2012) A. E. Firth et al.   JOURNAL OF GENERAL VIROLOGY

Switching on RNA Silencing Suppressor Activity by Restoring Argonaute Binding to a Viral Protein

(2012) E. Z. Szabo et al.   JOURNAL OF VIROLOGY

Evolution of Viral Proteins Originated De Novo by Overprinting

(2012) Niv Sabath et al.   MOLECULAR BIOLOGY AND EVOLUTION

Efficient -2 frameshifting by mammalian ribosomes to synthesize an additional arterivirus protein

(2012) Y. Fang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Triticum mosaic poacevirus enlists P1 rather than HC-Pro to suppress RNA silencing-mediated host defense

(2012) Satyanarayana Tatineni et al.   VIROLOGY

Complete nucleotide sequence of an Argentinean isolate of sweet potato virus G

(2012) P. E. Rodríguez Pardina et al.   VIRUS GENES

Phylogenetic relationships of closely related potyviruses infecting sweet potato determined by genomic characterization of Sweet potato virus G and Sweet potato virus 2

(2012) Fan Li et al.   VIRUS GENES

Tritimovirus P1 functions as a suppressor of RNA silencing and an enhancer of disease symptoms

(2012) Brock A. Young et al.   VIRUS RESEARCH

P1 peptidase – a mysterious protein of family Potyviridae

(2011) Jana Rohožková et al.   JOURNAL OF BIOSCIENCES

A Dual Strategy for the Suppression of Host Antiviral Silencing: Two Distinct Suppressors for Viral Replication and Viral Movement Encoded by Potato Virus M

(2011) H. Senshu et al.   JOURNAL OF VIROLOGY

Sweetpotato Viruses: 15 Years of Progress on Understanding and Managing Complex Diseases

(2011) Christopher A. Clark et al.   PLANT DISEASE

Analysis of complete genomic sequences of isolates of the Sweet potato feathery mottle virus strains C and EA: molecular evidence for two distinct potyvirus species and two P1 protein domains

(2010) Milton Untiveros et al.   ARCHIVES OF VIROLOGY

Comparisons among isolates of Sweet potato feathery mottle virus using complete genomic RNA sequences

(2010) S. Yamasaki et al.   ARCHIVES OF VIROLOGY

PONDR-FIT: A meta-predictor of intrinsically disordered amino acids

(2010) Bin Xue et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Argonaute quenching and global changes in Dicer homeostasis caused by a pathogen-encoded GW repeat protein

(2010) J. Azevedo et al.   GENES & DEVELOPMENT

Viral Protein Inhibits RISC Activity by Argonaute Binding through Conserved WG/GW Motifs

(2010) Ana Giner et al.   PLoS Pathogens

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Recombination and selection pressure in the ipomovirus sweet potato mild mottle virus (Potyviridae) in wild species and cultivated sweetpotato in the centre of evolution in East Africa

(2009) A. K. Tugume et al.   JOURNAL OF GENERAL VIROLOGY

Overlapping Genes Produce Proteins with Unusual Sequence Properties and Offer Insight into De Novo Protein Creation

(2009) C. Rancurel et al.   JOURNAL OF VIROLOGY

Cassava Brown Streak Virus (Potyviridae) Encodes a Putative Maf/HAM1 Pyrophosphatase Implicated in Reduction of Mutations and a P1 Proteinase That Suppresses RNA Silencing but Contains No HC-Pro

(2009) D. R. Mbanzibwa et al.   JOURNAL OF VIROLOGY

Protein structure prediction on the Web: a case study using the Phyre server

(2009) Lawrence A Kelley et al.   Nature Protocols

Elimination of antiviral defense by viral RNase III

(2009) W. J. Cuellar et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Complete viral genome sequence and discovery of novel viruses by deep sequencing of small RNAs: A generic method for diagnosis, discovery and sequencing of viruses

(2009) Jan F. Kreuze et al.   VIROLOGY

Molecular variability of sweet potato feathery mottle virus and other potyviruses infecting sweet potato in Peru

(2008) Milton Untiveros et al.   ARCHIVES OF VIROLOGY

Improved northern blot method for enhanced detection of small RNA

(2008) Gurman S Pall et al.   Nature Protocols

An overlapping essential gene in the Potyviridae

(2008) B. Y.-W. Chung et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA