An overview of the mechanisms underlying hypoxia tolerance differences in aquatic animals and their inspirations for aquaculture

Genome-wide association study identified candidate SNPs and genes associated with hypoxia tolerance in large yellow croaker (Larimichthys crocea)

(2022) Jie Ding et al.   AQUACULTURE

Oxygen sensing in crustaceans: functions and mechanisms

(2021) Tábata Martins de Lima et al.   JOURNAL OF COMPARATIVE PHYSIOLOGY A-NEUROETHOLOGY SENSORY NEURAL AND BEHAVIORAL PHYSIOLOGY

Impacts of hypoxic events surpass those of future ocean warming and acidification

(2021) Eduardo Sampaio et al.   Nature Ecology & Evolution

Genome-wide association analysis of adaptation to oxygen stress in Nile tilapia (Oreochromis niloticus)

(2021) Xiaofei Yu et al.   BMC GENOMICS

Increase of a hypoxia-tolerant fish, Harpadon nehereus (Synodontidae), as a result of ocean deoxygenation off southwestern China

(2021) Bin Kang et al.   ENVIRONMENTAL BIOLOGY OF FISHES

Integrated transcriptome and metabolome analysis reveals molecular responses of the clams to acute hypoxia

(2021) Xiujun Sun et al.   MARINE ENVIRONMENTAL RESEARCH

Genomic and functional evidence reveals convergent evolution in fishes on the Tibetan Plateau

(2021) Liandong Yang et al.   MOLECULAR ECOLOGY

Aquatic foods to nourish nations

(2021) Christopher D. Golden et al.   NATURE

Environmental performance of blue foods

(2021) Jessica A. Gephart et al.   NATURE

Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries

(2021) Pierre Boudry et al.   Aquaculture Reports

Genome-wide association study reveals multiple novel SNPs and putative candidate genes associated with low oxygen tolerance in golden pompano Trachinotus ovatus (Linnaeus 1758)

(2021) Li-Ze San et al.   AQUACULTURE

HIF-1 is involved in the regulation of expression of metallothionein and apoptosis incidence in different oxygen conditions in the white shrimp Litopenaeus vannamei

(2021) Jorge Duarte-Gutiérrez et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Distinct metabolic shifts occur during the transition between normoxia and hypoxia in the hybrid and its maternal abalone

(2021) Yawei Shen et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Role of hypoxia in the behaviour, physiology, immunity and response mechanisms of crustaceans: A review

(2021) Cheng Zheng et al.   Reviews in Aquaculture

Separating Paternal and Maternal Contributions to Thermal Transgenerational Plasticity

(2021) Sarah L. Chang et al.   Frontiers in Marine Science

Comparative analysis of liver transcriptomes associated with hypoxia tolerance in the gynogenetic blunt snout bream

(2020) Dingbin Gong et al.   AQUACULTURE

Loss of hypoxia-inducible factor 1α affects hypoxia tolerance in larval and adult zebrafish ( Danio rerio )

(2020) Milica Mandic et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Analysis of Multiplicity of Hypoxia-Inducible Factors in the Evolution of Triplophysa Fish (Osteichthyes: Nemacheilinae) Reveals Hypoxic Environments Adaptation to Tibetan Plateau

(2020) Juan Chen et al.   Frontiers in Genetics

Low Oxygen Stress During Early Development Influences Regulation of Hypoxia-Response Genes in Farmed Atlantic Salmon (Salmo salar)

(2020) Tara Kelly et al.   G3-Genes Genomes Genetics

Chromosome-Level Clam Genome Helps Elucidate the Molecular Basis of Adaptation to a Buried Lifestyle

(2020) Min Wei et al.   iScience

Research advances in the genomics and applications for molecular breeding of aquaculture animals

(2020) Xinxin You et al.   AQUACULTURE

Both maternal and embryonic exposure to mild hypoxia influence embryonic development of the intertidal gastropod Littorina littorea (Linnaeus, 1758)

(2020) James C. S. McCoy et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Hepatopancreas Transcriptome Profiling Analysis Reveals Physiological Responses to Acute Hypoxia and Reoxygenation in Juvenile Qingtian Paddy Field Carp Cyprinus carpio var qingtianensis

(2020) Ming Qi et al.   Frontiers in Physiology

Hypoxia-reoxygenation stress modulates the hepatopancreas transcriptome of Chinese mitten crab Eriocheir sinensis

(2020) Yu Xu et al.   GENE

De novo transcriptome assembly and gene expression profile of thermally challenged green abalone (Haliotis fulgens: Gastropoda) under acute hypoxia and hypercapnia

(2019) Miguel A. Tripp-Valdez et al.   Marine Genomics

Hypoxia tolerance in a selectively bred F4 population of blunt snout bream (Megalobrama amblycephala) under hypoxic stress

(2019) Cheng-Bin Wu et al.   AQUACULTURE

Evolutionary adaptation analysis of immune defense and hypoxia tolerance in two closely related Marsupenaeus species based on comparative transcriptomics

(2019) Panpan Wang et al.   FISH & SHELLFISH IMMUNOLOGY

Dietary nano‐selenium enhances antioxidant capacity and hypoxia tolerance of grass carp Ctenopharyngodon idella fed with high‐fat diet

(2019) Haibo Yu et al.   AQUACULTURE NUTRITION

Transcriptome and physiology analysis identify key metabolic changes in the liver of the large yellow croaker (Larimichthys crocea) in response to acute hypoxia

(2019) Jie Ding et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Dietary GABA enhances hypoxia tolerance of a bottom-dwelling carp, Cirrhinus mrigala by modulating HIF-1α, thyroid hormones and metabolic responses

(2019) Tincy Varghese et al.   FISH PHYSIOLOGY AND BIOCHEMISTRY

Limitations of cross‐ and multigenerational plasticity for marine invertebrates faced with global climate change

(2019) Maria Byrne et al.   GLOBAL CHANGE BIOLOGY

Stress across life stages: Impacts, responses and consequences for marine organisms

(2019) Jonathan Y.S. Leung et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Metabolic response to hypoxia in European sea bass ( Dicentrarchus labrax ) displays developmental plasticity

(2018) Laura Cadiz et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY

Hypoxia-inducible transcription factors in fish: expression, function and interconnection with the circadian clock

(2018) Bernd Pelster et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Inducible variation in anaerobic energy metabolism reflects hypoxia tolerance across the intertidal and subtidal distribution of the Pacific oyster ( Crassostrea gigas )

(2018) Jie Meng et al.   MARINE ENVIRONMENTAL RESEARCH

Declining oxygen in the global ocean and coastal waters

(2018) Denise Breitburg et al.   SCIENCE

Integrated metabolomic and transcriptomic analysis of brain energy metabolism in the male Oriental river prawn (Macrobrachium nipponense) in response to hypoxia and reoxygenation

(2018) Shengming Sun et al.   ENVIRONMENTAL POLLUTION

Genome-Wide QTL Analysis Identified Significant Associations Between Hypoxia Tolerance and Mutations in the GPR132 and ABCG4 Genes in Nile Tilapia

(2017) Hong Lian Li et al.   MARINE BIOTECHNOLOGY

Differential Gene Expression Profiles and Alternative Isoform Regulations in Gill of Nile Tilapia in Response to Acute Hypoxia

(2017) Hong Lian Li et al.   MARINE BIOTECHNOLOGY

Genome-Wide Association Study Reveals Multiple Novel QTL Associated with Low Oxygen Tolerance in Hybrid Catfish

(2017) Xiaoxiao Zhong et al.   MARINE BIOTECHNOLOGY

Genomic Selection in Plant Breeding: Methods, Models, and Perspectives

(2017) José Crossa et al.   TRENDS IN PLANT SCIENCE

Comparative studies of hemolymph physiology response and HIF-1 expression in different strains of Litopenaeus vannamei under acute hypoxia

(2016) Lin Wei et al.   CHEMOSPHERE

Transgenerational responses of molluscs and echinoderms to changing ocean conditions

(2016) Pauline M. Ross et al.   ICES JOURNAL OF MARINE SCIENCE

Intermittent hypoxia leads to functional reorganization of mitochondria and affects cellular bioenergetics in marine molluscs

(2016) Anna V. Ivanina et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Multiple across-strain and within-strain QTLs suggest highly complex genetic architecture for hypoxia tolerance in channel catfish

(2016) Xiaozhu Wang et al.   MOLECULAR GENETICS AND GENOMICS

Ionoregulatory Aspects of the Osmorespiratory Compromise during Acute Environmental Hypoxia in 12 Tropical and Temperate Teleosts

(2015) Lisa M. Robertson et al.   PHYSIOLOGICAL AND BIOCHEMICAL ZOOLOGY

Effects of environmental and farm stress on abalone physiology: perspectives for abalone aquaculture in the face of global climate change

(2015) Andrea J. Morash et al.   Reviews in Aquaculture

Comprehensive Transcriptome Analysis of Six Catfish Species from an Altitude Gradient Reveals Adaptive Evolution in Tibetan Fishes

(2015) Xiuhui Ma et al.   G3-Genes Genomes Genetics

Analysis of hypoxia-inducible factor alpha polyploidization reveals adaptation to Tibetan plateau in the evolution of schizothoracine fish

(2014) Lihong Guan et al.   BMC EVOLUTIONARY BIOLOGY

Mitochondria: a multimodal hub of hypoxia tolerance

(2014) Matthew E. Pamenter   CANADIAN JOURNAL OF ZOOLOGY

Respiratory response to combined heat and hypoxia in the marine bivalves Pecten maximus and Mytilus spp.

(2014) Sébastien Artigaud et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Transcriptional regulation of hypoxia inducible factors alpha (HIF-α) and their inhibiting factor (FIH-1) of channel catfish (Ictalurus punctatus) under hypoxia

(2014) Xin Geng et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY

Comprehensive Transcriptome Analysis Reveals Accelerated Genic Evolution in a Tibet Fish, Gymnodiptychus pachycheilus

(2014) Liandong Yang et al.   Genome Biology and Evolution

Hypoxia-inducible factor-1 mediates adaptive developmental plasticity of hypoxia tolerance in zebrafish, Danio rerio

(2014) C. E. Robertson et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genetic Analysis of Hypoxia Tolerance and Susceptibility in Drosophila and Humans

(2013) Dan Zhou et al.   Annual Review of Genomics and Human Genetics

Identification of HIF-1α promoter and expression regulation of HIF-1α gene by LPS and hypoxia in zebrafish

(2013) Shasha Liu et al.   FISH PHYSIOLOGY AND BIOCHEMISTRY

Molecular characterization and expression analysis of three hypoxia-inducible factor alpha subunits, HIF-1α, -2α and -3α in hypoxia-tolerant Indian catfish, Clarias batrachus [Linnaeus, 1758]

(2013) Vindhya Mohindra et al.   MOLECULAR BIOLOGY REPORTS

Hypoxia tolerance of common sole juveniles depends on dietary regime and temperature at the larval stage: evidence for environmental conditioning

(2013) J. L. Zambonino-Infante et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Dietary taurine can improve the hypoxia-tolerance but not the growth performance in juvenile grass carp Ctenopharyngodon idellus

(2012) Huijun Yang et al.   FISH PHYSIOLOGY AND BIOCHEMISTRY

Molecular characterization and expression analysis of three hypoxia-inducible factor alpha subunits, HIF-1α/2α/3α of the hypoxia-sensitive freshwater species, Chinese sucker

(2012) Nan Chen et al.   GENE

Gene Expression and Physiological Changes of Different Populations of the Long-Lived Bivalve Arctica islandica under Low Oxygen Conditions

(2012) Eva E. R. Philipp et al.   PLoS One

High-resolution analysis of metabolic cycles in the intertidal mussel Mytilus californianus

(2011) Kwasi M. Connor et al.   AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY

Potential of Nasopharynx-associated Lymphoid Tissue for Vaccine Responses in the Airways

(2011) Per Brandtzaeg   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Role of Hypoxia-Inducible Factor α in Response to Hypoxia and Heat Shock in the Pacific Oyster Crassostrea gigas

(2011) Shinya Kawabe et al.   MARINE BIOTECHNOLOGY

Massive mortality of the Asian clam Corbicula fluminea in a highly invaded area

(2010) Martina I. Ilarri et al.   BIOLOGICAL INVASIONS

HIF-1α and -2α genes in a hypoxia-sensitive teleost species Megalobrama amblycephala: cDNA cloning, expression and different responses to hypoxia

(2010) Rui-Jie Shen et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY

Genome-wide association and genomic selection in animal breedingThis article is one of a selection of papers from the conference “Exploiting Genome-wide Association in Oilseed Brassicas: a model for genetic improvement of major OECD crops for sustainable farming”.

(2010) Ben Hayes et al.   GENOME

Silencing of the hypoxia inducible factor 1 –HIF-1- obliterates the effects of hypoxia on glucose and lactate concentrations in a tissue-specific manner in the shrimp Litopenaeus vannamei

(2010) José G. Soñanez-Organis et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Transcriptomic response of the Pacific oyster Crassostrea gigas to hypoxia

(2010) Rossana Sussarellu et al.   Marine Genomics

Hypoxia Tolerance in Animals: Biology and Application

(2010) T. A. Gorr et al.   PHYSIOLOGICAL AND BIOCHEMICAL ZOOLOGY

Hypoxia and life-history traits in a eurytopic African cichlid

(2009) E. E. Reardon et al.   JOURNAL OF FISH BIOLOGY

Defending against hypoxia: Behavioural, physiological and biochemical strategies of hypoxia survival in nearshore marine sculpins

(2008) M. Mandic et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Spreading Dead Zones and Consequences for Marine Ecosystems

(2008) R. J. Diaz et al.   SCIENCE