Genome-Wide QTL Analysis Identified Significant Associations Between Hypoxia Tolerance and Mutations in the GPR132 and ABCG4 Genes in Nile Tilapia

Copy Number Variations in Tilapia Genomes

(2017) Bi Jun Li et al.   MARINE BIOTECHNOLOGY

Gpr132 sensing of lactate mediates tumor–macrophage interplay to promote breast cancer metastasis

(2017) Peiwen Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functional analysis of small ubiquitin-modifier (SUMO) in orange-spotted grouper (Epinephelus coioides)

(2016) Young-Mao Chen et al.   FISH & SHELLFISH IMMUNOLOGY

Influence of moderate hypoxia on vaccine efficacy against Vibrio anguillarum in Oreochromis niloticus (Nile tilapia)

(2016) Sanchala Gallage et al.   FISH & SHELLFISH IMMUNOLOGY

Multiple across-strain and within-strain QTLs suggest highly complex genetic architecture for hypoxia tolerance in channel catfish

(2016) Xiaozhu Wang et al.   MOLECULAR GENETICS AND GENOMICS

Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea

(2015) S. Das et al.   DNA RESEARCH

Shared Genetic Signals of Hypoxia Adaptation inDrosophilaand in High-Altitude Human Populations

(2015) Aashish R. Jha et al.   MOLECULAR BIOLOGY AND EVOLUTION

Signatures of selection in tilapia revealed by whole genome resequencing

(2015) Jun Hong Xia et al.   Scientific Reports

Construction of a high-density linkage map and fine mapping of QTL for growth in Asian seabass

(2015) Le Wang et al.   Scientific Reports

Genome-wide discovery and in silico mapping of gene-associated SNPs in Nile tilapia

(2014) Jun Hong Xia et al.   AQUACULTURE

A ddRAD-based genetic map and its integration with the genome assembly of Japanese eel (Anguilla japonica) provides insights into genome evolution after the teleost-specific genome duplication

(2014) Wataru Kai et al.   BMC GENOMICS

The genomic substrate for adaptive radiation in African cichlid fish

(2014) David Brawand et al.   NATURE

Whole genome scanning and association mapping identified a significant association between growth and a SNP in the IFABP-a gene of the Asian seabass

(2013) Jun Hong Xia et al.   BMC GENOMICS

A microsatellite-based linkage map of salt tolerant tilapia (Oreochromis mossambicus x Oreochromis spp.) and mapping of sex-determining loci

(2013) Feng Liu et al.   BMC GENOMICS

Transcriptome profiling and digital gene expression analysis of Nile tilapia (Oreochromis niloticus) infected by Streptococcus agalactiae

(2013) Rui Zhang et al.   MOLECULAR BIOLOGY REPORTS

Analysis of the black-chinned tilapiaSarotherodon melanotheron heudelotiireproducing under a wide range of salinities: from RNA-seq to candidate genes

(2013) J.-C. Avarre et al.   Molecular Ecology Resources

QTL-seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations

(2013) Hiroki Takagi et al.   PLANT JOURNAL

Mapping and Validation of the Major Sex-Determining Region in Nile Tilapia (Oreochromis niloticus L.) Using RAD Sequencing

(2013) Christos Palaiokostas et al.   PLoS One

Differential expression patterns of growth-related microRNAs in the skeletal muscle of Nile tilapia (Oreochromis niloticus)1

(2012) C. W. Huang et al.   JOURNAL OF ANIMAL SCIENCE

Exceptional cardiac anoxia tolerance in tilapia (Oreochromis hybrid)

(2012) S. L. Lague et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Time-dependent changes in protein expression in rainbow trout muscle following hypoxia

(2012) Tune Wulff et al.   Journal of Proteomics

SNP marker detection and genotyping in tilapia

(2012) N. E. M. Van BERS et al.   Molecular Ecology Resources

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species

(2012) Brant K. Peterson et al.   PLoS One

PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq)

(2011) R. Kofler et al.   BIOINFORMATICS

Identification of robust hypoxia biomarker candidates from fin of medaka (Oryzias latipes)

(2011) Ziping Zhang et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGY

Responses of threespine stickleback (Gasterosteus aculeatus, L) transcriptome to hypoxia

(2011) L. Leveelahti et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

Multipoint maximum likelihood mapping in a full-sib family of an outbreeding species

(2011) J. W. VAN OOIJEN   Genetics Research

Cloning and functional expression of novel cholesterol transporters ABCG1 and ABCG4 in gonadotropin-releasing hormone neurons of the tilapia

(2011) Y.L. Phang et al.   NEUROSCIENCE

Sequencing of 50 Human Exomes Reveals Adaptation to High Altitude

(2010) X. Yi et al.   SCIENCE

Hypoxia alters gene expression in the gonads of zebrafish (Danio rerio)☆☆☆◊

(2008) Dalma Martinovic et al.   AQUATIC TOXICOLOGY

Hypoxia-Inducible Factor-2α Transactivates Abcg2 and Promotes Cytoprotection in Cardiac Side Population Cells

(2008) Cindy M. Martin et al.   CIRCULATION RESEARCH

Identification and characterization of hypoxia-induced genes in Carassius auratus blastulae embryonic cells using suppression subtractive hybridization

(2008) Xue-Ping Zhong et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY