Differential Gene Expression Profiles and Alternative Isoform Regulations in Gill of Nile Tilapia in Response to Acute Hypoxia

Effects of hypoxia in the gills of the Manila clam Ruditapes philippinarum using NMR-based metabolomics

(2017) Ying Zhang et al.   MARINE POLLUTION BULLETIN

Transcriptomic responses of marine medaka’s ovary to hypoxia

(2016) Keng Po Lai et al.   AQUATIC TOXICOLOGY

Alternative splicing transcription of Megalobrama amblycephala HIF prolyl hydroxylase PHD3 and up-regulation of PHD3 by HIF-1α

(2016) Nan Chen et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Statistical evaluation of methods for identification of differentially abundant genes in comparative metagenomics

(2016) Viktor Jonsson et al.   BMC GENOMICS

Influence of moderate hypoxia on vaccine efficacy against Vibrio anguillarum in Oreochromis niloticus (Nile tilapia)

(2016) Sanchala Gallage et al.   FISH & SHELLFISH IMMUNOLOGY

Identification and Validation of Reference Genes for RT-qPCR Studies of Hypoxia in Squamous Cervical Cancer Patients

(2016) Christina S. Fjeldbo et al.   PLoS One

QoRTs: a comprehensive toolset for quality control and data processing of RNA-Seq experiments

(2015) Stephen W. Hartley et al.   BMC BIOINFORMATICS

Hypoxia-induced IL-32β increases glycolysis in breast cancer cells

(2015) Jeong Su Park et al.   CANCER LETTERS

The Effect of Silencing HIF-1α Gene in BxPC-3 Cell Line on Glycolysis-Related Gene Expression, Cell Growth, Invasion, and Apoptosis

(2015) Yi Jiang et al.   NUTRITION AND CANCER-AN INTERNATIONAL JOURNAL

Transcriptome analysis provides insights into the regulatory function of alternative splicing in antiviral immunity in grass carp (Ctenopharyngodon idella)

(2015) Quanyuan Wan et al.   Scientific Reports

Genome-wide analysis of alternative splicing in Volvox carteri

(2015) Arash Kianianmomeni et al.   BMC GENOMICS

miRNA-directed regulation of VEGF in tilapia under hypoxia condition

(2014) Yan Zhao et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Metabolic response to the stress of critical illness

(2014) J.-C. Preiser et al.   BRITISH JOURNAL OF ANAESTHESIA

Hypoxic adaptation engages the CBP/CREST-induced coactivator complex of Creb-HIF-1α in transactivating murine neuroblastic glucose transporter

(2013) Shanthie Thamotharan et al.   AMERICAN JOURNAL OF PHYSIOLOGY-ENDOCRINOLOGY AND METABOLISM

Transcriptional responses to temperature and low oxygen stress in Atlantic salmon studied with next-generation sequencing technology

(2013) Pål A Olsvik et al.   BMC GENOMICS

RNA-Seq reveals expression signatures of genes involved in oxygen transport, protein synthesis, folding, and degradation in response to heat stress in catfish

(2013) Shikai Liu et al.   PHYSIOLOGICAL GENOMICS

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Hypoxia-Induced Gene Expression in Chemoradioresistant Cervical Cancer Revealed by Dynamic Contrast-Enhanced MRI

(2012) C. Halle et al.   CANCER RESEARCH

Transcriptome survey reveals increased complexity of the alternative splicing landscape inArabidopsis

(2012) Yamile Marquez et al.   GENOME RESEARCH

Exceptional cardiac anoxia tolerance in tilapia (Oreochromis hybrid)

(2012) S. L. Lague et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Time-dependent changes in protein expression in rainbow trout muscle following hypoxia

(2012) Tune Wulff et al.   Journal of Proteomics

Differential analysis of gene regulation at transcript resolution with RNA-seq

(2012) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Estimation of alternative splicing isoform frequencies from RNA-Seq data

(2011) Marius Nicolae et al.   Algorithms for Molecular Biology

Responses of threespine stickleback (Gasterosteus aculeatus, L) transcriptome to hypoxia

(2011) L. Leveelahti et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

Identification of genes associated with heat tolerance in Arctic charr exposed to acute thermal stress

(2011) Nicole L. Quinn et al.   PHYSIOLOGICAL GENOMICS

Genome-wide analysis of alternative splicing in Caenorhabditis elegans

(2010) A. K. Ramani et al.   GENOME RESEARCH

Hypoxia Promotes Glycogen Accumulation through Hypoxia Inducible Factor (HIF)-Mediated Induction of Glycogen Synthase 1

(2010) Nuria Pescador et al.   PLoS One

Genome-wide mapping of alternative splicing in Arabidopsis thaliana

(2009) S. A. Filichkin et al.   GENOME RESEARCH

Genomic approaches in the identification of hypoxia biomarkers in model fish species

(2009) Ziping Zhang et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Hypoxia alters gene expression in the gonads of zebrafish (Danio rerio)☆☆☆◊

(2008) Dalma Martinovic et al.   AQUATIC TOXICOLOGY

The effect of hypoxia on gill morphology and ionoregulatory status in the Lake Qinghai scaleless carp, Gymnocypris przewalskii

(2008) V. Matey et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Abiotic stress response in plants: When post-transcriptional and post-translational regulations control transcription

(2008) Elisabetta Mazzucotelli et al.   PLANT SCIENCE