Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries

Prediction Accuracies of Genomic Selection for Nine Commercially Important Traits in the Portuguese Oyster (Crassostrea angulata) Using DArT-Seq Technology

(2021) Sang V. Vu et al.   Genes

Development and testing of a combined species SNP array for the European seabass (Dicentrarchus labrax) and gilthead seabream (Sparus aurata)

(2021) C. Peñaloza et al.   GENOMICS

Genomic Prediction Using Low Density Marker Panels in Aquaculture: Performance Across Species, Traits, and Genotyping Platforms

(2020) Christina Kriaridou et al.   Frontiers in Genetics

Harnessing genomics to fast-track genetic improvement in aquaculture

(2020) Ross D. Houston et al.   NATURE REVIEWS GENETICS

Genome-wide association mapping and accuracy of predictions for amoebic gill disease in Atlantic salmon (Salmo salar)

(2020) Muhammad L. Aslam et al.   Scientific Reports

Novel approach to incorporate information about recessive lethal genes increases the accuracy of genomic prediction for mortality traits

(2020) Grum Gebreyesus et al.   HEREDITY

Accuracy of genomic prediction of host resistance to salmon lice in Atlantic salmon (Salmo salar) using imputed high-density genotypes

(2020) M.H. Kjetså et al.   AQUACULTURE

Research advances in the genomics and applications for molecular breeding of aquaculture animals

(2020) Xinxin You et al.   AQUACULTURE

Genetic architecture and genomic selection of female reproduction traits in rainbow trout

(2020) J. D’Ambrosio et al.   BMC GENOMICS

Genome-wide association studies for resistance to viral nervous necrosis in three populations of European sea bass (Dicentrarchus labrax) using a novel 57k SNP array DlabChip

(2020) Ronan Griot et al.   AQUACULTURE

Genetic Variation, GWAS and Accuracy of Prediction for Host Resistance to Sparicotyle chrysophrii in Farmed Gilthead Sea Bream (Sparus aurata)

(2020) Muhammad Luqman Aslam et al.   Frontiers in Genetics

Genome-wide association analysis for body weight identifies candidate genes related to development and metabolism in rainbow trout (Oncorhynchus mykiss)

(2019) Rafael Vilhena Reis Neto et al.   MOLECULAR GENETICS AND GENOMICS

Genomic Selection in Aquaculture: Application, Limitations and Opportunities With Special Reference to Marine Shrimp and Pearl Oysters

(2019) Kyall R. Zenger et al.   Frontiers in Genetics

Combining Individual Phenotypes of Feed Intake With Genomic Data to Improve Feed Efficiency in Sea Bass

(2019) Mathieu Besson et al.   Frontiers in Genetics

Developing Successful Breeding Programs for New Zealand Aquaculture: A Perspective on Progress and Future Genomic Opportunities

(2019) Jane E. Symonds et al.   Frontiers in Genetics

The European sea bass: a key marine fish model in the wild and in aquaculture

(2019) M. Vandeputte et al.   ANIMAL GENETICS

Genome to Phenome: Improving Animal Health, Production, and Well-Being – A New USDA Blueprint for Animal Genome Research 2018–2027

(2019) Caird Rexroad et al.   Frontiers in Genetics

Design and characterization of an 87k SNP genotyping array for Arctic charr (Salvelinus alpinus)

(2019) Cameron M. Nugent et al.   PLoS One

Assessment of genetic diversity and population structure in cultured Australian Pacific oysters

(2019) J. W. Kijas et al.   ANIMAL GENETICS

Accuracy of selection for omega-3 fatty acid content in Atlantic salmon fillets

(2019) Siri S. Horn et al.   AQUACULTURE

Pooled genotyping strategies for the rapid construction of genomic reference populations1

(2019) Pâmela A Alexandre et al.   JOURNAL OF ANIMAL SCIENCE

Heritability and response to selection for carcass weight and growth in the Delta Select strain of channel catfish, Ictalurus punctatus

(2019) Brian Bosworth et al.   AQUACULTURE

Accuracy of genotype imputation and genomic predictions in a two-generation farmed Atlantic salmon population using high-density and low-density SNP panels

(2018) Grazyella M. Yoshida et al.   AQUACULTURE

Genetics of resistance to photobacteriosis in gilthead sea bream (Sparus aurata) using 2b-RAD sequencing

(2018) Muhammad L Aslam et al.   BMC GENETICS

Single-step genomic evaluation improves accuracy of breeding value predictions for resistance to infectious pancreatic necrosis virus in rainbow trout

(2018) Grazyella M. Yoshida et al.   GENOMICS

Genomic Tools and Selective Breeding in Molluscs

(2018) Christopher M. Hollenbeck et al.   Frontiers in Genetics

Detailed insights into pan-European population structure and inbreeding in wild and hatchery Pacific oysters (Crassostrea gigas ) revealed by genome-wide SNP data

(2018) David L. J. Vendrami et al.   Evolutionary Applications

Population-specific variations of the genetic architecture of sex determination in wild European sea bass Dicentrarchus labrax L.

(2018) Sara Faggion et al.   HEREDITY

Development and Validation of 58K SNP-Array and High-Density Linkage Map in Nile Tilapia (O. niloticus)

(2018) Rajesh Joshi et al.   Frontiers in Genetics

Accuracy of genomic predictions using different imputation error rates in aquaculture breeding programs: A simulation study

(2018) Pablo Dufflocq et al.   AQUACULTURE

Half a century of genetic interaction between farmed and wild Atlantic salmon: Status of knowledge and unanswered questions

(2017) Kevin A Glover et al.   FISH AND FISHERIES

Application of genomics in salmon aquaculture breeding programs by Ashie Norris

(2017) Ashie Norris   Marine Genomics

Applications of genotyping by sequencing in aquaculture breeding and genetics

(2017) Diego Robledo et al.   Reviews in Aquaculture

Construction and evaluation of a high-density SNP array for the Pacific oyster (Crassostrea gigas)

(2017) Haigang Qi et al.   PLoS One

Development of a 690 K SNP array in catfish and its application for genetic mapping and validation of the reference genome sequence

(2017) Qifan Zeng et al.   Scientific Reports

A comparative integrated gene-based linkage and locus ordering by linkage disequilibrium map for the Pacific white shrimp, Litopenaeus vannamei

(2017) David B. Jones et al.   Scientific Reports

Diversity and linkage disequilibrium in farmed Tasmanian Atlantic salmon

(2016) J. Kijas et al.   ANIMAL GENETICS

A comprehensive survey on selective breeding programs and seed market in the European aquaculture fish industry

(2016) Hervé Chavanne et al.   AQUACULTURE INTERNATIONAL

Genomic selection in domestic animals: Principles, applications and perspectives

(2016) Didier Boichard et al.   COMPTES RENDUS BIOLOGIES

Genetic load in marine animals: a review

(2016) Louis V. Plough   Current Zoology

Genomewide single nucleotide polymorphism discovery in Atlantic salmon (Salmo salar): validation in wild and farmed American and European populations

(2016) J. M. Yáñez et al.   Molecular Ecology Resources

Infectious diseases in oyster aquaculture require a new integrated approach

(2016) Fabrice Pernet et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genetic load in marine animals: a review

(2016) Louis V. Plough   Current Zoology

Genome-Wide Association Study for Identifying Loci that Affect Fillet Yield, Carcass, and Body Weight Traits in Rainbow Trout (Oncorhynchus mykiss)

(2016) Dianelys Gonzalez-Pena et al.   Frontiers in Genetics

Invasion genetics of the Pacific oyster Crassostrea gigas in the British Isles inferred from microsatellite and mitochondrial markers

(2015) Delphine Lallias et al.   BIOLOGICAL INVASIONS

Genome wide association and genomic prediction for growth traits in juvenile farmed Atlantic salmon using a high density SNP array

(2015) Hsin-Yuan Tsai et al.   BMC GENOMICS

Perspectives for Genomic Selection Applications and Research in Plants

(2015) Nicolas Heslot et al.   CROP SCIENCE

Genetic improvement for disease resistance in oysters: A review

(2015) Lionel Dégremont et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Genetic differentiation of brackish water populations of cod Gadus morhua in the southern Baltic, inferred from genotyping using SNP-arrays

(2015) A. Poćwierz-Kotus et al.   Marine Genomics

Identification of single nucleotide polymorphism markers associated with bacterial cold water disease resistance and spleen size in rainbow trout

(2015) Sixin Liu et al.   Frontiers in Genetics

Detection and Validation of QTL Affecting Bacterial Cold Water Disease Resistance in Rainbow Trout Using Restriction-Site Associated DNA Sequencing

(2015) Yniv Palti et al.   PLoS One

Development and evaluation of the first high-throughput SNP array for common carp (Cyprinus carpio)

(2014) Jian Xu et al.   BMC GENOMICS

Development and validation of a high density SNP genotyping array for Atlantic salmon (Salmo salar)

(2014) Ross D Houston et al.   BMC GENOMICS

The development and characterization of a 57K single nucleotide polymorphism array for rainbow trout

(2014) Y. Palti et al.   Molecular Ecology Resources

Genomic selection: genome-wide prediction in plant improvement

(2014) Zeratsion Abera Desta et al.   TRENDS IN PLANT SCIENCE

The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates

(2014) Camille Berthelot et al.   Nature Communications

The importance of selective breeding in aquaculture to meet future demands for animal protein: A review

(2012) Trygve Gjedrem et al.   AQUACULTURE

A synthetic rainbow trout linkage map provides new insights into the salmonid whole genome duplication and the conservation of synteny among teleosts

(2012) René Guyomard et al.   BMC GENETICS

Chromosomal differences between European and North American Atlantic salmon discovered by linkage mapping and supported by fluorescence in situ hybridization analysis

(2012) Silje Brenna-Hansen et al.   BMC GENOMICS

Research progress on the mollusc immunity in China

(2012) Lingling Wang et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Whole-Genome Regression and Prediction Methods Applied to Plant and Animal Breeding

(2012) G. de los Campos et al.   GENETICS

Review. Promises, pitfalls and challenges of genomic selection in breeding programs

(2011) N. Ibañez-Escriche et al.   SPANISH JOURNAL OF AGRICULTURAL RESEARCH

Development of a SNP resource and a genetic linkage map for Atlantic cod (Gadus morhua)

(2010) Sophie Hubert et al.   BMC GENOMICS

The Impact of Genetic Architecture on Genome-Wide Evaluation Methods

(2010) H. D. Daetwyler et al.   GENETICS

Optimum contribution selection using traditional best linear unbiased prediction and genomic breeding values in aquaculture breeding schemes

(2010) H. M. Nielsen et al.   JOURNAL OF ANIMAL SCIENCE

Causes and effects of a highly successful marine invasion: Case-study of the introduced Pacific oyster Crassostrea gigas in continental NW European estuaries

(2010) Karin Troost   JOURNAL OF SEA RESEARCH

Estimates of heritability and genetic correlation for body length and resistance to fish pasteurellosis in the gilthead sea bream (Sparus aurata L.)

(2009) Jenny Antonello et al.   AQUACULTURE

What is the heritable component of spinal deformities in the European sea bass (Dicentrarchus labrax)?

(2009) Agnès Bardon et al.   AQUACULTURE

Comparison of accuracy of genome-wide and BLUP breeding value estimates in sib based aquaculture breeding schemes

(2009) Hanne M. Nielsen et al.   AQUACULTURE

A relationship matrix including full pedigree and genomic information

(2009) A. Legarra et al.   JOURNAL OF DAIRY SCIENCE

Incorporating Desirable Genetic Characteristics From an Inferior Into a Superior Population Using Genomic Selection

(2008) J. Odegard et al.   GENETICS

Comparison of Production Traits of NWAC103 Channel Catfish, NWAC103 Channel Catfish × Blue Catfish Hybrids, Kansas Select 21 Channel Catfish, and Blue Catfish Grown at Commercial Densities and Exposed to Natural Bacterial Epizootics

(2008) Rex A. Dunham et al.   NORTH AMERICAN JOURNAL OF AQUACULTURE