A Model of Minor Histocompatibility Antigens in Allogeneic Hematopoietic Cell Transplantation

Most non-canonical proteins uniquely populate the proteome or immunopeptidome

(2021) Maria Virginia Ruiz Cuevas et al.   Cell Reports

ARTEMIS: A Novel Mass-Spec Platform for HLA-Restricted Self and Disease-Associated Peptide Discovery

(2021) Kathryn A. K. Finton et al.   Frontiers in Immunology

TCR-Like CAR-T Cells Targeting MHC-Bound Minor Histocompatibility Antigens

(2020) Yoshiki Akatsuka   Frontiers in Immunology

T-Cell Immunotherapies Targeting Histocompatibility and Tumor Antigens in Hematological Malignancies

(2020) Valérie Janelle et al.   Frontiers in Immunology

NetMHCpan-4.1 and NetMHCIIpan-4.0: improved predictions of MHC antigen presentation by concurrent motif deconvolution and integration of MS MHC eluted ligand data

(2020) Birkir Reynisson et al.   NUCLEIC ACIDS RESEARCH

Optimized Whole Genome Association Scanning for Discovery of HLA Class I-Restricted Minor Histocompatibility Antigens

(2020) Kyra J. Fuchs et al.   Frontiers in Immunology

Minor Histocompatibility Antigen-Specific T Cells

(2020) Corinne Summers et al.   Frontiers in Pediatrics

HA-1H T-Cell Receptor Gene Transfer to Redirect Virus-Specific T Cells for Treatment of Hematological Malignancies After Allogeneic Stem Cell Transplantation: A Phase 1 Clinical Study

(2020) Peter van Balen et al.   Frontiers in Immunology

Computational Analysis of HLA-presentation of Non-synonymous Recipient Mismatches Indicates Effect on the Risk of Chronic Graft-vs.-Host Disease After Allogeneic HSCT

(2019) Jarmo Ritari et al.   Frontiers in Immunology

PromPDD, a web-based tool for the prediction, deciphering and design of promiscuous peptides that bind to HLA class I molecules

(2019) Songlin Zhang et al.   JOURNAL OF IMMUNOLOGICAL METHODS

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools

(2019) Faviel F Gonzalez-Galarza et al.   NUCLEIC ACIDS RESEARCH

A large peptidome dataset improves HLA class I epitope prediction across most of the human population

(2019) Siranush Sarkizova et al.   NATURE BIOTECHNOLOGY

The Genomic Landscape of Antigenic Targets for T Cell-Based Leukemia Immunotherapy

(2019) Marie-Pierre Hardy et al.   Frontiers in Immunology

Exome chip analyses identify genes affecting mortality after HLA-matched unrelated-donor blood and marrow transplantation

(2018) Qianqian Zhu et al.   BLOOD

In Silico Analysis of the Minor Histocompatibility Antigen Landscape Based on the 1000 Genomes Project

(2018) Nadia A. Bykova et al.   Frontiers in Immunology

Nuclear processing of nascent transcripts determines synthesis of full-length proteins and antigenic peptides

(2018) Rodrigo Prado Martins et al.   NUCLEIC ACIDS RESEARCH

Haplosaurus computes protein haplotypes for use in precision drug design

(2018) William Spooner et al.   Nature Communications

Determining the Quantitative Principles of T Cell Response to Antigenic Disparity in Stem Cell Transplantation

(2018) Ali Salman et al.   Frontiers in Immunology

Genome-wide minor histocompatibility matching as related to the risk of graft-versus-host disease

(2016) Paul J. Martin et al.   BLOOD

HLAsupE: an integrated database of HLA supertype-specific epitopes to aid in the development of vaccines with broad coverage of the human population

(2016) Shufeng Wang et al.   BMC IMMUNOLOGY

Proteogenomic-based discovery of minor histocompatibility antigens with suitable features for immunotherapy of hematologic cancers

(2016) D P Granados et al.   LEUKEMIA

Global proteogenomic analysis of human MHC class I-associated peptides derived from non-canonical reading frames

(2016) Céline M. Laumont et al.   Nature Communications

Autosomal Minor Histocompatibility Antigens: How Genetic Variants Create Diversity in Immune Targets

(2016) Marieke Griffioen et al.   Frontiers in Immunology

LDlink: a web-based application for exploring population-specific haplotype structure and linking correlated alleles of possible functional variants: Fig. 1.

(2015) Mitchell J. Machiela et al.   BIOINFORMATICS

Minor histocompatibility antigens: past, present, and future

(2014) Eric Spierings   TISSUE ANTIGENS

Impact of genomic polymorphisms on the repertoire of human MHC class I-associated peptides

(2014) Diana Paola Granados et al.   Nature Communications

Six-locus high resolution HLA haplotype frequencies derived from mixed-resolution DNA typing for the entire US donor registry

(2013) Loren Gragert et al.   HUMAN IMMUNOLOGY

HLA Class I Alleles Are Associated with Peptide-Binding Repertoires of Different Size, Affinity, and Immunogenicity

(2013) S. Paul et al.   JOURNAL OF IMMUNOLOGY

Translation of pre-spliced RNAs in the nuclear compartment generates peptides for the MHC class I pathway

(2013) S. Apcher et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Effect of MHC and non-MHC donor/recipient genetic disparity on the outcome of allogeneic HCT

(2012) E. H. Warren et al.   BLOOD

Comparative analysis of risk factors for acute graft-versus-host disease and for chronic graft-versus-host disease according to National Institutes of Health consensus criteria

(2011) M. E. D. Flowers et al.   BLOOD

HLA class I allele promiscuity revisited

(2011) Xiangyu Rao et al.   IMMUNOGENETICS

Deriving the consequences of genomic variants with the Ensembl API and SNP Effect Predictor

(2010) William McLaren et al.   BIOINFORMATICS

Initial therapy of acute graft-versus-host disease with low-dose prednisone does not compromise patient outcomes

(2008) M. Mielcarek et al.   BLOOD

HLA class I supertypes: a revised and updated classification

(2008) John Sidney et al.   BMC IMMUNOLOGY