Genetic Variation, GWAS and Accuracy of Prediction for Host Resistance to Sparicotyle chrysophrii in Farmed Gilthead Sea Bream (Sparus aurata)

Mapping the knowledge of the main diseases affecting sea bass and sea bream in Mediterranean

(2020) Ana Muniesa et al.   Transboundary and Emerging Diseases

Genome-wide association mapping and accuracy of predictions for amoebic gill disease in Atlantic salmon (Salmo salar)

(2020) Muhammad L. Aslam et al.   Scientific Reports

Genomic Selection in Aquaculture: Application, Limitations and Opportunities With Special Reference to Marine Shrimp and Pearl Oysters

(2019) Kyall R. Zenger et al.   Frontiers in Genetics

Genetic parameters of resistance to amoebic gill disease in two Norwegian Atlantic salmon populations

(2019) Marie Lillehammer et al.   AQUACULTURE

Estimates of genetic correlations between susceptibility of Atlantic salmon to amoebic gill disease in a bath challenge test and a field test

(2019) Bjarne Gjerde et al.   AQUACULTURE

Genetics of resistance to photobacteriosis in gilthead sea bream (Sparus aurata) using 2b-RAD sequencing

(2018) Muhammad L Aslam et al.   BMC GENETICS

Genome-Wide Association and Genomic Selection for Resistance to Amoebic Gill Disease in Atlantic Salmon

(2018) Diego Robledo et al.   G3-Genes Genomes Genetics

Negative genetic correlation between resistance against Piscirickettsia salmonis and harvest weight in coho salmon (Oncorhynchus kisutch)

(2016) José M. Yáñez et al.   AQUACULTURE

A comprehensive survey on selective breeding programs and seed market in the European aquaculture fish industry

(2016) Hervé Chavanne et al.   AQUACULTURE INTERNATIONAL

Methodological assessment of 2b-RAD genotyping technique for population structure inferences in yellowfin tuna ( Thunnus albacares )

(2016) Carlo Pecoraro et al.   Marine Genomics

RNF122 suppresses antiviral type I interferon production by targeting RIG-I CARDs to mediate RIG-I degradation

(2016) Wendie Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Changes in genetic selection differentials and generation intervals in US Holstein dairy cattle as a result of genomic selection

(2016) Adriana García-Ruiz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Recombination in the eggs and sperm in a simultaneously hermaphroditic vertebrate

(2016) L. Theodosiou et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genomic Prediction of Resistance to Pasteurellosis in Gilthead Sea Bream (Sparus aurata) Using 2b-RAD Sequencing

(2016) C. Palaiokostas et al.   G3-Genes Genomes Genetics

The regulatory role of serum response factor pathway in neutrophil inflammatory response

(2015) Ashley Taylor et al.   CURRENT OPINION IN HEMATOLOGY

Strong effect of long-term Sparicotyle chrysophrii infection on the cellular and innate immune responses of gilthead sea bream, Sparus aurata

(2015) M.A. Henry et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Epithelial Cadherin Determines Resistance to Infectious Pancreatic Necrosis Virus in Atlantic Salmon

(2015) Thomas Moen et al.   GENETICS

Construction of Ultradense Linkage Maps with Lep-MAP2: Stickleback F2Recombinant Crosses as an Example

(2015) Pasi Rastas et al.   Genome Biology and Evolution

Mapping and validation of a major QTL affecting resistance to pancreas disease (salmonid alphavirus) in Atlantic salmon (Salmo salar)

(2015) S Gonen et al.   HEREDITY

Epithelial Cadherin Determines Resistance to Infectious Pancreatic Necrosis Virus in Atlantic Salmon

(2015) Thomas Moen et al.   GENETICS

Detection and Validation of QTL Affecting Bacterial Cold Water Disease Resistance in Rainbow Trout Using Restriction-Site Associated DNA Sequencing

(2015) Yniv Palti et al.   PLoS One

Genetic co-variation between resistance against both Caligus rogercresseyi and Piscirickettsia salmonis, and body weight in Atlantic salmon (Salmo salar)

(2014) José M. Yáñez et al.   AQUACULTURE

hsphase: an R package for pedigree reconstruction, detection of recombination events, phasing and imputation of half-sib family groups

(2014) Mohammad H Ferdosi et al.   BMC BIOINFORMATICS

Linkage maps of the Atlantic salmon (Salmo salar) genome derived from RAD sequencing

(2014) Serap Gonen et al.   BMC GENOMICS

Detection and mapping of QTL for temperature tolerance and body size in Chinook salmon (Oncorhynchus tshawytscha) using genotyping by sequencing

(2014) Meredith V. Everett et al.   Evolutionary Applications

Experimental transmission of Sparicotyle chrysophrii (Monogenea: Polyopisthocotylea) to gilthead seabream (Sparus aurata) and histopathology of the infection

(2014) Ariadna Sitja-Bobadilla et al.   FOLIA PARASITOLOGICA

Genomics and disease resistance studies in livestock

(2014) Stephen C Bishop et al.   Livestock Science

Second generation genetic linkage map for the gilthead sea bream Sparus aurata L.

(2014) Costas S. Tsigenopoulos et al.   Marine Genomics

Demystifying the RAD fad

(2014) Jonathan B. Puritz et al.   MOLECULAR ECOLOGY

Association Mapping of Disease Resistance Traits in Rainbow Trout Using Restriction Site Associated DNA Sequencing

(2014) Nathan R. Campbell et al.   G3-Genes Genomes Genetics

Genomic prediction in an admixed population of Atlantic salmon (Salmo salar)

(2014) Jørgen ØdegÃ¥rd et al.   Frontiers in Genetics

Tissue distribution and field evaluation of caprylic acid against natural infections of Sparicotyle chrysophrii in cage-reared gilthead sea bream Sparus aurata

(2013) George Rigos et al.   AQUACULTURE

A RAD-based linkage map and comparative genomics in the gudgeons (genus Gnathopogon, Cyprinidae)

(2013) Ryo Kakioka et al.   BMC GENOMICS

Mapping the sex determination locus in the Atlantic halibut (Hippoglossus hippoglossus) using RAD sequencing

(2013) Christos Palaiokostas et al.   BMC GENOMICS

Mapping and Validation of the Major Sex-Determining Region in Nile Tilapia (Oreochromis niloticus L.) Using RAD Sequencing

(2013) Christos Palaiokostas et al.   PLoS One

Negative genetic correlations between production traits and head or bony tissues in large all-female rainbow trout (Oncorhynchus mykiss)

(2012) Pierrick Haffray et al.   AQUACULTURE

Genetic variation in parasite resistance of Atlantic salmon to amoebic gill disease over multiple infections

(2012) Peter D. Kube et al.   AQUACULTURE

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

Whole genome SNP discovery and analysis of genetic diversity in Turkey (Meleagris gallopavo)

(2012) Muhammad L Aslam et al.   BMC GENOMICS

A high density recombination map of the pig reveals a correlation between sex-specific recombination and GC content

(2012) Flavie Tortereau et al.   BMC GENOMICS

THE CONTRIBUTION OF FEMALE MEIOTIC DRIVE TO THE EVOLUTION OF NEO-SEX CHROMOSOMES

(2012) Kohta Yoshida et al.   EVOLUTION

2b-RAD: a simple and flexible method for genome-wide genotyping

(2012) Shi Wang et al.   NATURE METHODS

Two-Phase Analysis in Consensus Genetic Mapping

(2012) Y. Ronin et al.   G3-Genes Genomes Genetics

Estimates of genetic variation in the susceptibility of Atlantic salmon (Salmo salar) to the salmon louse Lepeophtheirus salmonis

(2011) Bjarne Gjerde et al.   AQUACULTURE

Methodology for genetic evaluation of disease resistance in aquaculture species: challenges and future prospects

(2011) Jørgen Ødegård et al.   AQUACULTURE RESEARCH

Technical note: Efficient parentage assignment and pedigree reconstruction with dense single nucleotide polymorphism data

(2011) B.J. Hayes   JOURNAL OF DAIRY SCIENCE

GCTA: A Tool for Genome-wide Complex Trait Analysis

(2010) Jian Yang et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Missing heritability and strategies for finding the underlying causes of complex disease

(2010) Evan E. Eichler et al.   NATURE REVIEWS GENETICS

Rare Variants Create Synthetic Genome-Wide Associations

(2010) Samuel P. Dickson et al.   PLOS BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Population stratification and patterns of linkage disequilibrium

(2009) Anthony L. Hinrichs et al.   GENETIC EPIDEMIOLOGY

A Comprehensive Linkage Map of the Dog Genome

(2009) A. K. Wong et al.   GENETICS

The karyopherin CRM1 is required for dendritic cell maturation

(2009) Jan Chemnitz et al.   IMMUNOBIOLOGY

A linkage map of the Atlantic salmon (Salmo salar) based on EST-derived SNP markers

(2008) Thomas Moen et al.   BMC GENOMICS

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

(2008) Nathan A. Baird et al.   PLoS One