The evolution of knowledge on seafood spoilage microbiota from the 20th to the 21st century: Have we finished or just begun?

Climate change and its implications for food safety and spoilage

(2021) Ourania Misiou et al.   TRENDS IN FOOD SCIENCE & TECHNOLOGY

Metagenome-Assembled Genomes Contribute to Unraveling of the Microbiome of Cocoa Fermentation

(2021) O. G. G. Almeida et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization of the Volatiles and Quality of Hybrid Grouper and Their Relationship to Changes of Microbial Community During Storage at 4 °C

(2020) Wenbo Huang et al.   MOLECULES

Salmon Gravlax Biopreservation With Lactic Acid Bacteria: A Polyphasic Approach to Assessing the Impact on Organoleptic Properties, Microbial Ecosystem and Volatilome Composition

(2020) Norman Wiernasz et al.   Frontiers in Microbiology

Microbiota and Shelf Life of Whole and Gutted Pacific Saury (Cololabis saira) During Refrigerated Storage

(2020) Rong Cao et al.   Journal of Ocean University of China

Microbiota and volatilome profile of fresh and chill-stored deepwater rose shrimp (Parapenaeus longirostris)

(2020) Foteini F. Parlapani et al.   FOOD RESEARCH INTERNATIONAL

HRM and 16S rRNA gene sequencing reveal the cultivable microbiota of the European sea bass during ice storage

(2020) Faidra Syropoulou et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Effects of ethyl lauroyl arginate hydrochloride on microbiota, quality and biochemical changes of container-cultured largemouth bass (Micropterus salmonides) fillets during storage at 4 °C

(2020) Shuai Zhuang et al.   FOOD CHEMISTRY

Discrimination of raw material species in mixed seafood products (surimi) using the next generation sequencing method

(2020) Eun Soo Noh et al.   Food Bioscience

Microbial diversity of seafood

(2020) Foteini F Parlapani   Current Opinion in Food Science

Impact of DNA extraction and sampling methods on bacterial communities monitored by 16S rDNA metabarcoding in cold-smoked salmon and processing plant surfaces

(2020) Aurélien Maillet et al.   FOOD MICROBIOLOGY

Dynamics of bacterial communities and interaction networks in thawed fish fillets during chilled storage in air

(2019) Teresa Zotta et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Microbiological status based on 454-pyrosequencing and volatilome analysis of gilthead seabream (Sparus aurata) fed on diets with hydrolyzed feather meal and poultry by-product meal as fishmeal replacers

(2019) Foteini F. Parlapani et al.   EUROPEAN FOOD RESEARCH AND TECHNOLOGY

Bacterial spoilage profiles in the gills of Pacific oysters (Crassostrea gigas) and Eastern oysters (C. virginica) during refrigerated storage

(2019) Huibin Chen et al.   FOOD MICROBIOLOGY

Bacterial communities and potential spoilage markers of whole blue crab (Callinectes sapidus) stored under commercial simulated conditions

(2019) F.F. Parlapani et al.   FOOD MICROBIOLOGY

Effect of ε-polylysine and ice storage on microbiota composition and quality of Pacific white shrimp (Litopenaeus vannamei) stored at 0 °C

(2019) Shiliang Jia et al.   FOOD MICROBIOLOGY

Biosensors for early detection of fungi spoilage and toxigenic and mycotoxins in food

(2019) Idjane Santana Oliveira et al.   Current Opinion in Food Science

Review on Natural Preservatives for Extending Fish Shelf Life

(2019) Jun Mei et al.   Foods

Effect of EGCG-gelatin biofilm on the quality and microbial composition of tilapia fillets during chilled storage

(2019) Jun Cao et al.   FOOD CHEMISTRY

HRM analysis as a tool to facilitate identification of bacteria from mussels during storage at 4 °C

(2019) F.F. Parlapani et al.   FOOD MICROBIOLOGY

Natural products with preservative properties for enhancing the microbiological safety and extending the shelf-life of seafood: A review

(2019) Rafaela C. Baptista et al.   FOOD RESEARCH INTERNATIONAL

Effects of disease, antibiotic treatment and recovery trajectory on the microbiome of farmed seabass (Dicentrarchus labrax)

(2019) Daniela Rosado et al.   Scientific Reports

Superchilling in combination with modified atmosphere packaging resulted in long shelf-life and limited microbial growth in Atlantic cod (Gadus morhua L.) from capture-based-aquaculture in Greenland

(2019) Jonas Steenholdt Sørensen et al.   FOOD MICROBIOLOGY

Application of Illumina-MiSeq high throughput sequencing and culture-dependent techniques for the identification of microbiota of silver carp ( Hypophthalmichthys molitrix ) treated by tea polyphenols

(2018) Shiliang Jia et al.   FOOD MICROBIOLOGY

Changes in microbial communities and quality attributes of white muscle and dark muscle from common carp ( Cyprinus carpio ) during chilled and freeze-chilled storage

(2018) Qian Li et al.   FOOD MICROBIOLOGY

Monitoring bacterial communities in ε-Polylysine-treated bighead carp ( Aristichthys nobilis ) fillets using culture-dependent and culture-independent techniques

(2018) Xiaochang Liu et al.   FOOD MICROBIOLOGY

Microbiological, chemical and sensory spoilage analysis of raw Atlantic cod ( Gadus morhua ) stored under modified atmospheres

(2018) L. Kuuliala et al.   FOOD MICROBIOLOGY

A meta-barcoding approach to assess and compare the storage temperature-dependent bacterial diversity of gilt-head sea bream ( Sparus aurata ) originating from fish farms from two geographically distinct areas of Greece

(2018) Foteini F. Parlapani et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Effect of vacuum and modified atmosphere packaging on the microbiological, chemical and sensory properties of tropical red drum ( Sciaenops ocellatus ) fillets stored at 4 °C

(2018) Adèle Silbande et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

The effect of essential oils on microbial composition and quality of grass carp ( Ctenopharyngodon idellus ) fillets during chilled storage

(2018) Zhan Huang et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Seafood spoilage microbiota and associated volatile organic compounds at different storage temperatures and packaging conditions

(2018) Olumide A. Odeyemi et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Characterization of spoilage markers in modified atmosphere packaged iceberg lettuce

(2018) Angelos-Gerasimos Ioannidis et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Succession of bacterial microbiota in tilapia fillets at 4 °C and in situ investigation of spoilers

(2018) Shan Duan et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Recent Past, Present, and Future of the Food Microbiome

(2018) Francesca De Filippis et al.   Annual Review of Food Science and Technology

Microbial spoilage investigation of thawed common cuttlefish (Sepia officinalis) stored at 2 °C using next generation sequencing and volatilome analysis

(2018) F.F. Parlapani et al.   FOOD MICROBIOLOGY

Deciphering intra-species bacterial diversity of meat and seafood spoilage microbiota using gyrB amplicon sequencing: A comparative analysis with 16S rDNA V3-V4 amplicon sequencing

(2018) Simon Poirier et al.   PLoS One

Metabolomics and bacterial diversity of packaged yellowfin tuna (Thunnus albacares) and salmon (Salmo salar) show fish species-specific spoilage development during chilled storage

(2018) Elina Jääskeläinen et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Characterization of the microbial composition and quality of lightly salted grass carp (Ctenopharyngodon idellus) fillets with vacuum or modified atmosphere packaging

(2018) Jingbin Zhang et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

The use of next generation sequencing for improving food safety: Translation into practice

(2018) Balamurugan Jagadeesan et al.   FOOD MICROBIOLOGY

Antimicrobial effects of cinnamon bark oil on microbial composition and quality of grass carp ( Ctenopharyngodon idellus ) fillets during chilled storage

(2017) Zhan Huang et al.   FOOD CONTROL

Improving simultaneously the quality and safety of cooked and peeled shrimp using a cocktail of bioprotective lactic acid bacteria

(2017) Taous Saraoui et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Next generation microbiological risk assessment meta-omics: The next need for integration

(2017) Luca Cocolin et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Efficiency of Rosemary and Basil Essential Oils on the Shelf-Life Extension of Atlantic Mackerel (Scomber scombrus) Fillets Stored at 2°C

(2017) Romdhane Karoui et al.   JOURNAL OF AOAC INTERNATIONAL

Essential oils for antimicrobial and antioxidant applications in fish and other seafood products

(2017) Abdo Hassoun et al.   TRENDS IN FOOD SCIENCE & TECHNOLOGY

Translating Omics to Food Microbiology

(2017) Aaron M. Walsh et al.   Annual Review of Food Science and Technology

Current perspectives in food-based studies exploiting multi-omics approaches

(2017) Ilario Ferrocino et al.   Current Opinion in Food Science

Reducing bias in complex microbial community analysis in shrimp based on propidium monoazide combined with PCR-DGGE

(2016) Fei Zhao et al.   FOOD CONTROL

Contamination of salmon fillets and processing plants with spoilage bacteria

(2016) Trond Møretrø et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Strategies to increase the hygienic and economic value of fresh fish: Biopreservation using lactic acid bacteria of marine origin

(2016) Beatriz Gómez-Sala et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Monitoring of spoilage and determination of microbial communities based on 16S rRNA gene sequence analysis of whole sea bream stored at various temperatures

(2016) Foteini F. Parlapani et al.   LWT-FOOD SCIENCE AND TECHNOLOGY

Metagenomics insights into food fermentations

(2016) Francesca De Filippis et al.   Microbial Biotechnology

Metatranscriptomics reveals temperature-driven functional changes in microbiome impacting cheese maturation rate

(2016) Francesca De Filippis et al.   Scientific Reports

Metagenomic sequencing reveals the relationship between microbiota composition and quality of Chinese Rice Wine

(2016) Xutao Hong et al.   Scientific Reports

Characterization of the dominant bacterial communities during storage of Norway lobster and Norway lobster tails ( Nephrops norvegicus ) based on 16S rDNA analysis by PCR-DGGE

(2015) Karen Bekaert et al.   FOOD MICROBIOLOGY

Impact of Next Generation Sequencing Techniques in Food Microbiology

(2014) Baltasar Mayo et al.   CURRENT GENOMICS

Origin and ecological selection of core and food-specific bacterial communities associated with meat and seafood spoilage

(2014) Stéphane Chaillou et al.   ISME Journal

Chitosan coating incorporated with the lactoperoxidase system: an active edible coating for fish preservation

(2014) Mohammad Sedigh Jasour et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

Microbiological changes, shelf life and identification of initial and spoilage microbiota of sea bream fillets stored under various conditions using 16S rRNA gene analysis

(2014) Foteini F Parlapani et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

Investigation of quality attributes of ice-stored Pacific white shrimp (Litopenaeus vannamei) as affected by sequential minimal ozone treatment

(2014) Charles Odilichukwu R. Okpala   LWT-FOOD SCIENCE AND TECHNOLOGY

High-Throughput Sequencing and Metagenomics: Moving Forward in the Culture-Independent Analysis of Food Microbial Ecology

(2013) Danilo Ercolini   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identification and classification of seafood-borne pathogenic and spoilage bacteria: 16S rRNA sequencing versus MALDI-TOF MS fingerprinting

(2013) Karola Böhme et al.   ELECTROPHORESIS

Health benefits of seafood; Is it just the fatty acids?

(2013) Elizabeth K. Lund   FOOD CHEMISTRY

Molecular identification of the microbiota of peeled and unpeeled brown shrimp (Crangon crangon) during storage on ice and at 7.5 °C

(2013) Katrien Broekaert et al.   FOOD MICROBIOLOGY

Culture independent methods to assess the diversity and dynamics of microbiota during food fermentation

(2013) Luca Cocolin et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Evolution of the indigenous microbiota in modified atmosphere packaged Atlantic horse mackerel (Trachurus trachurus) identified by conventional and molecular methods

(2013) Begoña Alfaro et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Towards metagenome-scale models for industrial applications—the case of Lactic Acid Bacteria

(2012) Filipe Branco dos Santos et al.   CURRENT OPINION IN BIOTECHNOLOGY

Indigenous and spoilage microbiota of farmed sea bream stored in ice identified by phenotypic and 16S rRNA gene analysis

(2012) F.F. Parlapani et al.   FOOD MICROBIOLOGY

Rapid species identification of seafood spoilage and pathogenic Gram-positive bacteria by MALDI-TOF mass fingerprinting

(2011) Karola Böhme et al.   ELECTROPHORESIS

Characterisation of the spoilage microbiota in raw salmon (Salmo salar) steaks stored under vacuum or modified atmosphere packaging combining conventional methods and PCR–TTGE

(2011) Sabrina Macé et al.   FOOD MICROBIOLOGY

Characterisation of the microbiota of Atlantic mackerel (Scomber scombrus)

(2011) Cecilie Smith Svanevik et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Species Differentiation of Seafood Spoilage and Pathogenic Gram-Negative Bacteria by MALDI-TOF Mass Fingerprinting

(2010) Karola Böhme et al.   JOURNAL OF PROTEOME RESEARCH

Selection and evaluation of seafood-borne psychrotrophic lactic acid bacteria as inhibitors of pathogenic and spoilage bacteria

(2009) S. Matamoros et al.   FOOD MICROBIOLOGY

Investigation of archaeal and bacterial diversity in fermented seafood using barcoded pyrosequencing

(2009) Seong Woon Roh et al.   ISME Journal

Enzyme activities of lactic acid bacteria from a pearl millet fermented gruel (ben-saalga) of functional interest in nutrition

(2008) L.T. Songré-Ouattara et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Study of the bacterial ecosystem in tropical cooked and peeled shrimps using a polyphasic approach

(2008) E. Jaffrès et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY