Multiple mechanisms drive phage infection efficiency in nearly identical hosts

Lysogeny in nature: mechanisms, impact and ecology of temperate phages

(2017) Cristina Howard-Varona et al.   ISME Journal

Transient Oral Human Cytomegalovirus Infections Indicate Inefficient Viral Spread from Very Few Initially Infected Cells

(2017) Bryan T. Mayer et al.   JOURNAL OF VIROLOGY

Communication between viruses guides lysis–lysogeny decisions

(2017) Zohar Erez et al.   NATURE

Ménage à trois in the human gut: interactions between host, bacteria and phages

(2017) Mohammadali Khan Mirzaei et al.   NATURE REVIEWS MICROBIOLOGY

Giant viruses with an expanded complement of translation system components

(2017) Frederik Schulz et al.   SCIENCE

Different Origins of Newcastle Disease Virus Hemagglutinin-Neuraminidase Protein Modulate the Replication Efficiency and Pathogenicity of the Virus

(2017) Ji-hui Jin et al.   Frontiers in Microbiology

Comparative Omics and Trait Analyses of Marine Pseudoalteromonas Phages Advance the Phage OTU Concept

(2017) Melissa B. Duhaime et al.   Frontiers in Microbiology

vConTACT: an iVirus tool to classify double-stranded DNA viruses that infect Archaea and Bacteria

(2017) Benjamin Bolduc et al.   PeerJ

An insider's perspective: Bacteroides as a window into the microbiome

(2017) Aaron G. Wexler et al.   Nature Microbiology

Functional association of cellular microtubules with viral capsid assembly supports efficient hepatitis B virus replication

(2017) Masashi Iwamoto et al.   Scientific Reports

Genomic differentiation among wild cyanophages despite widespread horizontal gene transfer

(2016) Ann C. Gregory et al.   BMC GENOMICS

Viral metabolic reprogramming in marine ecosystems

(2016) Bonnie L Hurwitz et al.   CURRENT OPINION IN MICROBIOLOGY

Large-scale maps of variable infection efficiencies in aquatic Bacteroidetes phage-host model systems

(2016) Karin Holmfeldt et al.   ENVIRONMENTAL MICROBIOLOGY

Regulation of infection efficiency in a globally abundant marine Bacteriodetes virus

(2016) Cristina Howard-Varona et al.   ISME Journal

iVirus: facilitating new insights in viral ecology with software and community data sets imbedded in a cyberinfrastructure

(2016) Benjamin Bolduc et al.   ISME Journal

Global Transcriptional Analysis of Virus-Host Interactions between Phage ϕ29 and Bacillus subtilis

(2016) Laura Mojardín et al.   JOURNAL OF VIROLOGY

Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses

(2016) Simon Roux et al.   NATURE

Uncovering Earth’s virome

(2016) David Paez-Espino et al.   NATURE

Gene Expression Patterns during Light and Dark Infection of Prochlorococcus by Cyanophage

(2016) Luke R. Thompson et al.   PLoS One

Healthy human gut phageome

(2016) Pilar Manrique et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Expanding Family of Virophages

(2016) Meriem Bekliz et al.   Viruses-Basel

Viral RNA Degradation and Diffusion Act as a Bottleneck for the Influenza A Virus Infection Efficiency

(2016) Max Schelker et al.   PLoS Computational Biology

Next-Generation “-omics” Approaches Reveal a Massive Alteration of Host RNA Metabolism during Bacteriophage Infection of Pseudomonas aeruginosa

(2016) Anne Chevallereau et al.   PLoS Genetics

More Is Better: Selecting for Broad Host Range Bacteriophages

(2016) Alexa Ross et al.   Frontiers in Microbiology

Microbial metabolisms in a 2.5-km-deep ecosystem created by hydraulic fracturing in shales

(2016) Rebecca A. Daly et al.   Nature Microbiology

Innate immune responses in human hepatocyte-derived cell lines alter genotype 1 hepatitis E virus replication efficiencies

(2016) Pradip B. Devhare et al.   Scientific Reports

Transcriptome analysis of Sulfolobus solfataricus infected with two related fuselloviruses reveals novel insights into the regulation of CRISPR-Cas system

(2015) Salvatore Fusco et al.   BIOCHIMIE

Transcriptome analysis of bacteriophage communities in periodontal health and disease

(2015) Tasha M. Santiago-Rodriguez et al.   BMC GENOMICS

Variably lytic infection dynamics of largeBacteroidetespodovirus phi38:1 against twoCellulophaga balticahost strains

(2015) Vinh T. Dang et al.   ENVIRONMENTAL MICROBIOLOGY

Transcriptomic response during phage infection of a marine cyanobacterium under phosphorus-limited conditions

(2015) Xingqin Lin et al.   ENVIRONMENTAL MICROBIOLOGY

A multitrophic model to quantify the effects of marine viruses on microbial food webs and ecosystem processes

(2015) Joshua S Weitz et al.   ISME Journal

Transcriptome dynamics of a broad host-range cyanophage and its hosts

(2015) Shany Doron et al.   ISME Journal

Regulation of Norovirus Virulence by the VP1 Protruding Domain Correlates with B Cell Infection Efficiency

(2015) Shu Zhu et al.   JOURNAL OF VIROLOGY

Microbial Surface Colonization and Biofilm Development in Marine Environments

(2015) Hongyue Dang et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

CRISPR-Cas immunity in prokaryotes

(2015) Luciano A. Marraffini   NATURE

Genetic code flexibility in microorganisms: novel mechanisms and impact on physiology

(2015) Jiqiang Ling et al.   NATURE REVIEWS MICROBIOLOGY

A functional perspective on phenotypic heterogeneity in microorganisms

(2015) Martin Ackermann   NATURE REVIEWS MICROBIOLOGY

A century of the phage: past, present and future

(2015) George P. C. Salmond et al.   NATURE REVIEWS MICROBIOLOGY

A new perspective on lysogeny: prophages as active regulatory switches of bacteria

(2015) Ron Feiner et al.   NATURE REVIEWS MICROBIOLOGY

2016 update of the PRIDE database and its related tools

(2015) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

Bacteriophage lambda: Early pioneer and still relevant

(2015) Sherwood R. Casjens et al.   VIROLOGY

Multicopy Single-Stranded DNA Directs Intestinal Colonization of Enteric Pathogens

(2015) Johanna R. Elfenbein et al.   PLoS Genetics

Battling Phages: How Bacteria Defend against Viral Attack

(2015) Kimberley D. Seed   PLoS Pathogens

Engineering Modular Viral Scaffolds for Targeted Bacterial Population Editing

(2015) Hiroki Ando et al.   Cell Systems

Functional elucidation of antibacterial phage ORFans targetingPseudomonas aeruginosa

(2014) Jeroen Wagemans et al.   CELLULAR MICROBIOLOGY

Contrasting genomic patterns and infection strategies of two co-existingBacteroidetespodovirus genera

(2014) Karin Holmfeldt et al.   ENVIRONMENTAL MICROBIOLOGY

Phage lysis: Three steps, three choices, one outcome

(2014) Ryland Young   JOURNAL OF MICROBIOLOGY

Development of Giant Bacteriophage  KZ Is Independent of the Host Transcription Apparatus

(2014) P.-J. Ceyssens et al.   JOURNAL OF VIROLOGY

Prophage Induction and Differential RecA and UmuDAb Transcriptome Regulation in the DNA Damage Responses of Acinetobacter baumannii and Acinetobacter baylyi

(2014) Janelle M. Hare et al.   PLoS One

Exploiting gut bacteriophages for human health

(2014) Marion Dalmasso et al.   TRENDS IN MICROBIOLOGY

Phages Preying on Bacillus anthracis, Bacillus cereus, and Bacillus thuringiensis: Past, Present and Future

(2014) Annika Gillis et al.   Viruses-Basel

Bacteriophages: an underestimated role in human and animal health?

(2014) Marianne De Paepe et al.   Frontiers in Cellular and Infection Microbiology

Current taxonomy of phages infecting lactic acid bacteria

(2014) Jennifer Mahony et al.   Frontiers in Microbiology

Molecular Aspects and Comparative Genomics of Bacteriophage Endolysins

(2013) H. Oliveira et al.   JOURNAL OF VIROLOGY

Diverse Functions of Restriction-Modification Systems in Addition to Cellular Defense

(2013) K. Vasu et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Comparative Phosphoproteomics Reveals Components of Host Cell Invasion and Post-transcriptional Regulation DuringFrancisellaInfection

(2013) Ernesto S. Nakayasu et al.   MOLECULAR & CELLULAR PROTEOMICS

Functional requirements for bacteriophage growth: gene essentiality and expression in mycobacteriophage Giles

(2013) Rebekah M. Dedrick et al.   MOLECULAR MICROBIOLOGY

Activated ClpP kills persisters and eradicates a chronic biofilm infection

(2013) B. P. Conlon et al.   NATURE

Revenge of the phages: defeating bacterial defences

(2013) Julie E. Samson et al.   NATURE REVIEWS MICROBIOLOGY

Twelve previously unknown phage genera are ubiquitous in global oceans

(2013) K. Holmfeldt et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacteriophage adhering to mucus provide a non-host-derived immunity

(2013) J. J. Barr et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fitness benefits of low infectivity in a spatially structured population of bacteriophages

(2013) P. Roychoudhury et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Understanding Bacteriophage Specificity in Natural Microbial Communities

(2013) Britt Koskella et al.   Viruses-Basel

A Multifaceted Study of Pseudomonas aeruginosa Shutdown by Virulent Podovirus LUZ19

(2013) R. Lavigne et al.   mBio

Metabolic reprogramming by viruses in the sunlit and dark ocean

(2013) Bonnie L Hurwitz et al.   GENOME BIOLOGY

A multi-omic systems approach to elucidating Yersinia virulence mechanisms

(2012) Charles Ansong et al.   Molecular BioSystems

Coexistence of phage and bacteria on the boundary of self-organized refuges

(2012) S. Heilmann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phage–bacteria infection networks

(2012) Joshua S. Weitz et al.   TRENDS IN MICROBIOLOGY

Easyfig: a genome comparison visualizer

(2011) M. J. Sullivan et al.   BIOINFORMATICS

Genetic Response to Bacteriophage Infection in Lactococcus lactis Reveals a Four-Strand Approach Involving Induction of Membrane Stress Proteins, D-Alanylation of the Cell Wall, Maintenance of Proton Motive Force, and Energy Conservation

(2011) V. Fallico et al.   JOURNAL OF VIROLOGY

Environmental and Gut Bacteroidetes: The Food Connection

(2011) François Thomas et al.   Frontiers in Microbiology

Bacteriophage resistance mechanisms

(2010) Simon J. Labrie et al.   NATURE REVIEWS MICROBIOLOGY

Transcriptional control in the prereplicative phase of T4 development

(2010) Deborah M Hinton   Virology Journal

Transcription of the T4 late genes

(2010) E Peter Geiduschek et al.   Virology Journal

MASIC: A software program for fast quantitation and flexible visualization of chromatographic profiles from detected LC–MS(/MS) features

(2008) Matthew E. Monroe et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY