Lysogeny in nature: mechanisms, impact and ecology of temperate phages
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Lysogeny in nature: mechanisms, impact and ecology of temperate phages
Authors
Keywords
-
Journal
ISME Journal
Volume 11, Issue 7, Pages 1511-1520
Publisher
Springer Nature
Online
2017-03-14
DOI
10.1038/ismej.2017.16
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Genetic and life-history traits associated with the distribution of prophages in bacteria
- (2016) Marie Touchon et al. ISME Journal
- Lytic to temperate switching of viral communities
- (2016) B. Knowles et al. NATURE
- Uncovering Earth’s virome
- (2016) David Paez-Espino et al. NATURE
- Re-examination of the relationship between marine virus and microbial cell abundances
- (2016) Charles H. Wigington et al. Nature Microbiology
- Diversity and Ecology of Viruses in Hyperarid Desert Soils
- (2015) Olivier Zablocki et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Coral Mucus Is a Hot Spot for Viral Infections
- (2015) Hanh Nguyen-Kim et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Transcriptome analysis of bacteriophage communities in periodontal health and disease
- (2015) Tasha M. Santiago-Rodriguez et al. BMC GENOMICS
- Comparative analysis of multiple inducible phages from Mannheimia haemolytica
- (2015) Yan D. Niu et al. BMC MICROBIOLOGY
- Variably lytic infection dynamics of largeBacteroidetespodovirus phi38:1 against twoCellulophaga balticahost strains
- (2015) Vinh T. Dang et al. ENVIRONMENTAL MICROBIOLOGY
- Single-cell genomics-based analysis of virus–host interactions in marine surface bacterioplankton
- (2015) Jessica M Labonté et al. ISME Journal
- Seasonal time bombs: dominant temperate viruses affect Southern Ocean microbial dynamics
- (2015) Jennifer R Brum et al. ISME Journal
- A new perspective on lysogeny: prophages as active regulatory switches of bacteria
- (2015) Ron Feiner et al. NATURE REVIEWS MICROBIOLOGY
- A unified initiative to harness Earth's microbiomes
- (2015) A. P. Alivisatos et al. SCIENCE
- Bacteriophage lambda: Early pioneer and still relevant
- (2015) Sherwood R. Casjens et al. VIROLOGY
- Viral activities and life cycles in deep subseafloor sediments
- (2015) Tim Engelhardt et al. Environmental Microbiology Reports
- The Human Skin Double-Stranded DNA Virome: Topographical and Temporal Diversity, Genetic Enrichment, and Dynamic Associations with the Host Microbiome
- (2015) Geoffrey D. Hannigan et al. mBio
- Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
- (2015) Simon Roux et al. eLife
- The human gut virome: a multifaceted majority
- (2015) Lesley A. Ogilvie et al. Frontiers in Microbiology
- VirSorter: mining viral signal from microbial genomic data
- (2015) Simon Roux et al. PeerJ
- Mechanisms of DNA Packaging by Large Double-Stranded DNA Viruses
- (2015) Venigalla B. Rao et al. Annual Review of Virology
- Bacteriophage and their potential roles in the human oral cavity
- (2015) Anna Edlund et al. Journal of Oral Microbiology
- Comparison of single-molecule sequencing and hybrid approaches for finishing the genome of Clostridium autoethanogenum and analysis of CRISPR systems in industrial relevant Clostridia
- (2014) Steven D Brown et al. Biotechnology for Biofuels
- The Virome in Mammalian Physiology and Disease
- (2014) Herbert W. Virgin CELL
- Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities
- (2014) Chris L Dupont et al. ISME Journal
- Classification and quantification of bacteriophage taxa in human gut metagenomes
- (2014) Alison S Waller et al. ISME Journal
- Natural Competence and the Evolution of DNA Uptake Specificity
- (2014) J. C. Mell et al. JOURNAL OF BACTERIOLOGY
- Impact of Spontaneous Prophage Induction on the Fitness of Bacterial Populations and Host-Microbe Interactions
- (2014) Arun M. Nanda et al. JOURNAL OF BACTERIOLOGY
- New Applications for Phage Integrases
- (2014) Paul C.M. Fogg et al. JOURNAL OF MOLECULAR BIOLOGY
- Molecular Bases and Role of Viruses in the Human Microbiome
- (2014) Shira R. Abeles et al. JOURNAL OF MOLECULAR BIOLOGY
- Beyond the Chromosome: The Prevalence of Unique Extra-Chromosomal Bacteriophages with Integrated Virulence Genes in Pathogenic Staphylococcus aureus
- (2014) Bryan Utter et al. PLoS One
- Revisiting Bistability in the Lysis/Lysogeny Circuit of Bacteriophage Lambda
- (2014) Michael Bednarz et al. PLoS One
- Modeling ecological drivers in marine viral communities using comparative metagenomics and network analyses
- (2014) B. L. Hurwitz et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Pervasive domestication of defective prophages by bacteria
- (2014) L.-M. Bobay et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Marine Tubeworm Metamorphosis Induced by Arrays of Bacterial Phage Tail-Like Structures
- (2014) N. J. Shikuma et al. SCIENCE
- Temperate Phages Acquire DNA from Defective Prophages by Relaxed Homologous Recombination: The Role of Rad52-Like Recombinases
- (2014) Marianne De Paepe et al. PLoS Genetics
- Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell- and meta-genomics
- (2014) Simon Roux et al. eLife
- Bacteriophages: an underestimated role in human and animal health?
- (2014) Marianne De Paepe et al. Frontiers in Cellular and Infection Microbiology
- Emerging methods to study bacteriophage infection at the single-cell level
- (2014) Vinh T. Dang et al. Frontiers in Microbiology
- Bacteriophages of Leuconostoc, Oenococcus, and Weissella
- (2014) Witold Kot et al. Frontiers in Microbiology
- Environmental bacteriophages: viruses of microbes in aquatic ecosystems
- (2014) Télesphore Sime-Ngando Frontiers in Microbiology
- Single-cell and population level viral infection dynamics revealed by phageFISH, a method to visualize intracellular and free viruses
- (2013) Elke Allers et al. ENVIRONMENTAL MICROBIOLOGY
- Shotgun metagenomics indicates novel family A DNA polymerases predominate within marine virioplankton
- (2013) Helen F Schmidt et al. ISME Journal
- Revenge of the phages: defeating bacterial defences
- (2013) Julie E. Samson et al. NATURE REVIEWS MICROBIOLOGY
- Temperate Bacterial Viruses as Double-Edged Swords in Bacterial Warfare
- (2013) João Alves Gama et al. PLoS One
- Genome signature-based dissection of human gut metagenomes to extract subliminal viral sequences
- (2013) Lesley A. Ogilvie et al. Nature Communications
- Importance of prophages to evolution and virulence of bacterial pathogens
- (2013) Louis-Charles Fortier et al. Virulence
- Expression of a Novel P22 ORFan Gene Reveals the Phage Carrier State in Salmonella Typhimurium
- (2013) William Cenens et al. PLoS Genetics
- Enterococcus faecalis Prophage Dynamics and Contributions to Pathogenic Traits
- (2013) Renata C. Matos et al. PLoS Genetics
- Dynamic Viral Populations in Hypersaline Systems as Revealed by Metagenomic Assembly
- (2012) Joanne B. Emerson et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- PHACTS, a computational approach to classifying the lifestyle of phages
- (2012) Katelyn McNair et al. BIOINFORMATICS
- Novel High-Molecular-Weight, R-Type Bacteriocins of Clostridium difficile
- (2012) D. Gebhart et al. JOURNAL OF BACTERIOLOGY
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
- (2012) Anton Bankevich et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- The Adaptation of Temperate Bacteriophages to Their Host Genomes
- (2012) Louis-Marie Bobay et al. MOLECULAR BIOLOGY AND EVOLUTION
- Going viral: next-generation sequencing applied to phage populations in the human gut
- (2012) Alejandro Reyes et al. NATURE REVIEWS MICROBIOLOGY
- PhiSpy: a novel algorithm for finding prophages in bacterial genomes that combines similarity- and composition-based strategies
- (2012) Sajia Akhter et al. NUCLEIC ACIDS RESEARCH
- A composite bacteriophage alters colonization by an intestinal commensal bacterium
- (2012) B. A. Duerkop et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Fake virus particles generated by fluorescence microscopy
- (2012) Patrick Forterre et al. TRENDS IN MICROBIOLOGY
- Pirates of the Caudovirales
- (2012) Gail E. Christie et al. VIROLOGY
- Diversity and Abundance of Single-Stranded DNA Viruses in Human Feces
- (2011) Min-Soo Kim et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- PHAST: A Fast Phage Search Tool
- (2011) Y. Zhou et al. NUCLEIC ACIDS RESEARCH
- Probing Individual Environmental Bacteria for Viruses by Using Microfluidic Digital PCR
- (2011) A. D. Tadmor et al. SCIENCE
- Antibiotics in Feed Induce Prophages in Swine Fecal Microbiomes
- (2011) H. K. Allen et al. mBio
- Decision Making at a Subcellular Level Determines the Outcome of Bacteriophage Infection
- (2010) Lanying Zeng et al. CELL
- Cryptic prophages help bacteria cope with adverse environments
- (2010) Xiaoxue Wang et al. Nature Communications
- The genome and structural proteome of an ocean siphovirus: a new window into the cyanobacterial ‘mobilome’
- (2009) Matthew B. Sullivan et al. ENVIRONMENTAL MICROBIOLOGY
- Resources drive trade-off between viral lifestyles in the plankton: evidence from freshwater microbial microcosms
- (2009) A. S. Pradeep Ram et al. ENVIRONMENTAL MICROBIOLOGY
- Diversity of Prophages in Dominant Staphylococcus aureus Clonal Lineages
- (2009) C. Goerke et al. JOURNAL OF BACTERIOLOGY
- Prophinder: a computational tool for prophage prediction in prokaryotic genomes
- (2008) Gipsi Lima-Mendez et al. BIOINFORMATICS
- Bacteriophage in polar inland waters
- (2008) Christin Säwström et al. EXTREMOPHILES
- Prophages in marine bacteria: dangerous molecular time bombs or the key to survival in the seas?
- (2008) John H Paul ISME Journal
- Metagenomic Analysis of Lysogeny in Tampa Bay: Implications for Prophage Gene Expression
- (2008) Lauren McDaniel et al. PLoS One
- Phages across the biosphere: contrasts of viruses in soil and aquatic environments
- (2008) Sharath Srinivasiah et al. RESEARCH IN MICROBIOLOGY
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started