Gene Expression Patterns during Light and Dark Infection of Prochlorococcus by Cyanophage

Viruses Inhibit CO 2 Fixation in the Most Abundant Phototrophs on Earth

(2016) Richard J. Puxty et al.   CURRENT BIOLOGY

The Water to Water Cycles in Microalgae

(2016) Gilles Curien et al.   PLANT AND CELL PHYSIOLOGY

Transcriptomic response during phage infection of a marine cyanobacterium under phosphorus-limited conditions

(2015) Xingqin Lin et al.   ENVIRONMENTAL MICROBIOLOGY

Response of Prochlorococcus to varying CO2:O2 ratios

(2015) Sarah C Bagby et al.   ISME Journal

Transcriptome dynamics of a broad host-range cyanophage and its hosts

(2015) Shany Doron et al.   ISME Journal

Bacterial protein networks: properties and functions

(2015) Athanasios Typas et al.   NATURE REVIEWS MICROBIOLOGY

Comparative metagenomic analyses reveal viral-induced shifts of host metabolism towards nucleotide biosynthesis

(2014) Hagay Enav et al.   Microbiome

Comparative studies of differential gene calling using RNA-Seq data

(2013) Ximeng Zheng et al.   BMC BIOINFORMATICS

Genetic diversity in cultured and wild marine cyanomyoviruses reveals phosphorus stress as a strong selective agent

(2013) Libusha Kelly et al.   ISME Journal

Thylakoid Terminal Oxidases Are Essential for the Cyanobacterium Synechocystis sp. PCC 6803 to Survive Rapidly Changing Light Intensities

(2013) D. J. Lea-Smith et al.   PLANT PHYSIOLOGY

Marine Viruses Exploit Their Host's Two-Component Regulatory System in Response to Resource Limitation

(2012) Qinglu Zeng et al.   CURRENT BIOLOGY

Transcriptome and Proteome Dynamics of a Light-Dark Synchronized Bacterial Cell Cycle

(2012) Jacob R. Waldbauer et al.   PLoS One

Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes

(2012) Georgia Giannoukos et al.   GENOME BIOLOGY

Differential expression in RNA-seq: A matter of depth

(2011) S. Tarazona et al.   GENOME RESEARCH

Marine cyanophages: tinkering with the electron transport chain

(2011) Alon Philosof et al.   ISME Journal

Transcriptome response of high- and low-light-adapted Prochlorococcus strains to changing iron availability

(2011) Anne W Thompson et al.   ISME Journal

Comparative metagenomics of microbial traits within oceanic viral communities

(2011) Itai Sharon et al.   ISME Journal

Duplex-specific nuclease efficiently removes rRNA for prokaryotic RNA-seq

(2011) Hana Yi et al.   NUCLEIC ACIDS RESEARCH

Phage auxiliary metabolic genes and the redirection of cyanobacterial host carbon metabolism

(2011) L. R. Thompson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reconstructing a puzzle: existence of cyanophages containing both photosystem-I and photosystem-II gene suites inferred from oceanic metagenomic datasets

(2010) Ariella Alperovitch-Lavy et al.   ENVIRONMENTAL MICROBIOLOGY

Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments

(2010) Matthew B. Sullivan et al.   ENVIRONMENTAL MICROBIOLOGY

Light-dependent adsorption of photosynthetic cyanophages to Synechococcus  sp. WH7803

(2010) Ying Jia et al.   FEMS MICROBIOLOGY LETTERS

A photosynthetic strategy for coping in a high-light, low-nutrient environment

(2010) Katherine R. M. Mackey et al.   LIMNOLOGY AND OCEANOGRAPHY

Comprehensive comparative analysis of strand-specific RNA sequencing methods

(2010) Joshua Z Levin et al.   NATURE METHODS

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Ecological Genomics of Marine Picocyanobacteria

(2009) D. J. Scanlan et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Photosystem I gene cassettes are present in marine virus genomes

(2009) Itai Sharon et al.   NATURE

Repressor CopG prevents access of RNA polymerase to promoter and actively dissociates open complexes

(2009) Ana M. Hernández-Arriaga et al.   NUCLEIC ACIDS RESEARCH

Choreography of the Transcriptome, Photophysiology, and Cell Cycle of a Minimal Photoautotroph, Prochlorococcus

(2009) Erik R. Zinser et al.   PLoS One

Alternative photosynthetic electron flow to oxygen in marine Synechococcus

(2008) Shaun Bailey et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Co-localization of glyceraldehyde-3-phosphate dehydrogenase with ferredoxin-NADP reductase in pea leaf chloroplasts

(2007) Surendra S. Negi et al.   JOURNAL OF STRUCTURAL BIOLOGY