RNA Methylome Reveals the m6A-mediated Regulation of Flavor Metabolites in Tea Leaves under Solar-withering

Epigenetic Regulation of the Phytohormone Abscisic Acid Accumulation under Dehydration Stress during Postharvest Processing of Tea (Camellia sinensis)

(2021) Dachuan Gu et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Involvement of DNA methylation in regulating the accumulation of the aroma compound indole in tea (Camellia sinensis) leaves during postharvest processing

(2021) Jie Yang et al.   FOOD RESEARCH INTERNATIONAL

Ambient Ultraviolet B Signal Modulates Tea Flavor Characteristics via Shifting a Metabolic Flux in Flavonoid Biosynthesis

(2021) Ning Lin et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Divergent DNA methylation contributes to duplicated gene evolution and chilling response in tea plants

(2021) Wei Tong et al.   PLANT JOURNAL

N 6 ‐Methyladenosine mRNA methylation is important for salt stress tolerance in Arabidopsis

(2021) Jianzhong Hu et al.   PLANT JOURNAL

Pre- and post-harvest exposure to stress influence quality-related metabolites in fresh tea leaves (Camellia sinensis)

(2021) Chenyu Shao et al.   SCIENTIA HORTICULTURAE

TeaAS: a comprehensive database for alternative splicing in tea plants (Camellia sinensis)

(2021) Xiaozeng Mi et al.   BMC PLANT BIOLOGY

HS-SPME and GC/MS volatile component analysis of Yinghong No. 9 dark tea during the pile fermentation process

(2021) Wenji Zhang et al.   FOOD CHEMISTRY

Effects of red-light withering on the taste of black tea as revealed by non-targeted metabolomics and transcriptomics analysis

(2021) Yuchuan Li et al.   LWT-FOOD SCIENCE AND TECHNOLOGY

Understanding the promotion of withering treatment on quality of postharvest tea leaves using UHPLC-orbitrap-MS metabolomics integrated with TMT-Based proteomics

(2021) Tiancheng Ni et al.   LWT-FOOD SCIENCE AND TECHNOLOGY

Genome-Wide Investigation of N6-Methyladenosine Regulatory Genes and Their Roles in Tea (Camellia sinensis) Leaves During Withering Process

(2021) Chen Zhu et al.   Frontiers in Plant Science

The Genome Sequence Archive Family: Toward Explosive Data Growth and Diverse Data Types

(2021) Tingting Chen et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Improving the Tea Withering Process Using Ethylene or UV-C

(2021) Emma R. Collings et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

The m 6 A reader MhYTP2 regulates MdMLO19 mRNA stability and antioxidant genes translation efficiency conferring powdery mildew resistance in apple

(2021) Tianli Guo et al.   PLANT BIOTECHNOLOGY JOURNAL

Comprehensive profiling of alternative splicing landscape during cold acclimation in tea plant

(2020) Yeyun Li et al.   BMC GENOMICS

Transcriptome and Metabolic Profiling Unveiled Roles of Peroxidases in Theaflavin Production in Black Tea Processing and Determination of Tea Processing Suitability

(2020) Gaoyang Zhang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

UV-B Induces Distinct Transcriptional Re-programing in UVR8-Signal Transduction, Flavonoid, and Terpenoids Pathways in Camellia sinensis

(2020) Lubobi Ferdinand Shamala et al.   Frontiers in Plant Science

Insights into the N6-methyladenosine mechanism and its functionality: progress and questions

(2020) Margaret Scarrow et al.   CRITICAL REVIEWS IN BIOTECHNOLOGY

The reference genome of tea plant and resequencing of 81 diverse accessions provide insights into genome evolution and adaptation of tea plants

(2020) Enhua Xia et al.   Molecular Plant

Functional Implications of Active N6-Methyladenosine in Plants

(2020) Hongxiang Zheng et al.   Frontiers in Cell and Developmental Biology

TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data

(2020) Chengjie Chen et al.   Molecular Plant

Association between chemistry and taste of tea: A review

(2020) Liang Zhang et al.   TRENDS IN FOOD SCIENCE & TECHNOLOGY

Functional Characterization of a Putative RNA Demethylase ALKBH6 in Arabidopsis Growth and Abiotic Stress Responses

(2020) Trinh Thi Huong et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Transcriptome-Wide N6-Methyladenosine (m6A) Methylome Profiling of Heat Stress in Pak-choi (Brassica rapa ssp. chinensis)

(2020) Gaofeng Liu et al.   Plants-Basel

Chinese oolong tea: An aromatic beverage produced under multiple stresses

(2020) Lanting Zeng et al.   TRENDS IN FOOD SCIENCE & TECHNOLOGY

Analysis of N6-methyladenosine reveals a new important mechanism regulating the salt tolerance of sweet sorghum

(2020) Hongxiang Zheng et al.   PLANT SCIENCE

Nucleocytosolic mRNA transport in plants: export factors and their influence on growth and development

(2019) Hans F Ehrnsberger et al.   JOURNAL OF EXPERIMENTAL BOTANY

The subunit of RNA N6-methyladenosine methyltransferase OsFIP regulates early degeneration of microspores in rice

(2019) Fan Zhang et al.   PLoS Genetics

Epitranscriptomic RNA Methylation in Plant Development and Abiotic Stress Responses

(2019) Jianzhong Hu et al.   Frontiers in Plant Science

Transcriptome and Phytochemical Analyses Provide New Insights Into Long Non-Coding RNAs Modulating Characteristic Secondary Metabolites of Oolong Tea (Camellia sinensis) in Solar-Withering

(2019) Chen Zhu et al.   Frontiers in Plant Science

Regulation of alternative mRNA splicing: old players and new perspectives

(2018) Heidi Dvinge   FEBS LETTERS

Formation mechanism of the oolong tea characteristic aroma during bruising and withering treatment

(2018) Ci-Jie Hu et al.   FOOD CHEMISTRY

The m6A Reader ECT2 Controls Trichome Morphology by Affecting mRNA Stability in Arabidopsis

(2018) Lian-Huan Wei et al.   PLANT CELL

The YTH Domain Protein ECT2 Is an m6A Reader Required for Normal Trichome Branching in Arabidopsis

(2018) Jérémy Scutenaire et al.   PLANT CELL

DNA methylome analysis provides evidence that the expansion of the tea genome is linked to TE bursts

(2018) Lei Wang et al.   PLANT BIOTECHNOLOGY JOURNAL

Understanding the biosyntheses and stress response mechanisms of aroma compounds in tea (Camellia sinensis) to safely and effectively improve tea aroma

(2018) Lanting Zeng et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

Novel insight into the role of withering process in characteristic flavor formation of teas using transcriptome analysis and metabolite profiling

(2018) Yu Wang et al.   FOOD CHEMISTRY

Formation of ( E )-nerolidol in tea ( Camellia sinensis ) leaves exposed to multiple stresses during tea manufacturing

(2017) Ying Zhou et al.   FOOD CHEMISTRY

Impact of light irradiation on black tea quality during withering

(2017) Zeyi Ai et al.   JOURNAL OF FOOD SCIENCE AND TECHNOLOGY-MYSORE

A global survey of alternative splicing in allopolyploid cotton: landscape, complexity and regulation

(2017) Maojun Wang et al.   NEW PHYTOLOGIST

ALKBH10B Is an RNAN6-Methyladenosine Demethylase Affecting Arabidopsis Floral Transition

(2017) Hong-Chao Duan et al.   PLANT CELL

Transcriptome Profiling Using Single-Molecule Direct RNA Sequencing Approach for In-depth Understanding of Genes in Secondary Metabolism Pathways of Camellia sinensis

(2017) Qingshan Xu et al.   Frontiers in Plant Science

N 6 -Methyladenosine RNA Modification Regulates Shoot Stem Cell Fate in Arabidopsis

(2016) Lisha Shen et al.   DEVELOPMENTAL CELL

Unveiling the complexity of the maize transcriptome by single-molecule long-read sequencing

(2016) Bo Wang et al.   Nature Communications

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

(2015) Mihaela Pertea et al.   NATURE BIOTECHNOLOGY

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

A protocol for RNA methylation differential analysis with MeRIP-Seq data and exomePeak R/Bioconductor package

(2014) Jia Meng et al.   METHODS

Gene expression regulation mediated through reversible m6A RNA methylation

(2014) Ye Fu et al.   NATURE REVIEWS GENETICS

The dynamic epitranscriptome: N6-methyladenosine and gene expression control

(2014) Kate D. Meyer et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

rMATS: Robust and flexible detection of differential alternative splicing from replicate RNA-Seq data

(2014) Shihao Shen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Unique features of the m6A methylome in Arabidopsis thaliana

(2014) Guan-Zheng Luo et al.   Nature Communications

N6-methyladenosine-dependent regulation of messenger RNA stability

(2013) Xiao Wang et al.   NATURE

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq

(2012) Dan Dominissini et al.   NATURE

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities

(2010) Sven Heinz et al.   MOLECULAR CELL

Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana

(2010) D. C. Nelson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reaction of the Black Tea Pigment Theaflavin during Enzymatic Oxidation of Tea Catechins

(2009) Yan Li et al.   JOURNAL OF NATURAL PRODUCTS

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

Programmed cell death in plants: distinguishing between different modes

(2008) Theresa J. Reape et al.   JOURNAL OF EXPERIMENTAL BOTANY