A Phage Foundry Framework to Systematically Develop Viral Countermeasures to Combat Antibiotic-Resistant Bacterial Pathogens

Global burden of bacterial antimicrobial resistance in 2019: a systematic analysis

(2022) Christopher JL Murray et al.   LANCET

Combination of pre-adapted bacteriophage therapy and antibiotics for treatment of fracture-related infection due to pandrug-resistant Klebsiella pneumoniae

(2022) Anaïs Eskenazi et al.   Nature Communications

Mitigation of evolved bacterial resistance to phage therapy

(2022) Clara Torres-Barceló et al.   Current Opinion in Virology

Designing P. aeruginosa synthetic phages with reduced genomes

(2021) Diana P. Pires et al.   Scientific Reports

Bacteriophage-resistant Acinetobacter baumannii are resensitized to antimicrobials

(2021) Fernando Gordillo Altamirano et al.   Nature Microbiology

Animal Models in the Evaluation of the Effectiveness of Phage Therapy for Infections Caused by Gram-Negative Bacteria from the ESKAPE Group and the Reliability of Its Use in Humans

(2021) Martyna Cieślik et al.   Microorganisms

Lytic bacteriophages facilitate antibiotic sensitization of Enterococcus faecium

(2021) Gregory S. Canfield et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Systematic discovery of pseudomonad genetic factors involved in sensitivity to tailocins

(2021) Sean Carim et al.   ISME Journal

Antimicrobial resistance and COVID-19: Intersections and implications

(2021) Gwenan M Knight et al.   eLife

Animal Models of Phage Therapy

(2021) Samuel Penziner et al.   Frontiers in Microbiology

Approaches for manufacture, formulation, targeted delivery and controlled release of phage-based therapeutics

(2021) Danish J Malik   CURRENT OPINION IN BIOTECHNOLOGY

Preclinical data and safety assessment of phage therapy in humans

(2021) Janet Y Nale et al.   CURRENT OPINION IN BIOTECHNOLOGY

CRISPY-BRED and CRISPY-BRIP: efficient bacteriophage engineering

(2021) Katherine S. Wetzel et al.   Scientific Reports

Phage Therapy for Antibiotic-Resistant Bacterial Infections

(2021) Graham F. Hatfull et al.   Annual Review of Medicine

Manufacturing of bacteriophages for therapeutic applications

(2021) Jorge João et al.   BIOTECHNOLOGY ADVANCES

Genome-driven elucidation of phage-host interplay and impact of phage resistance evolution on bacterial fitness

(2021) Pawel Markwitz et al.   ISME Journal

Coevolutionary phage training leads to greater bacterial suppression and delays the evolution of phage resistance

(2021) Joshua M. Borin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Temporal shifts in antibiotic resistance elements govern phage-pathogen conflicts

(2021) Kristen N. LeGault et al.   SCIENCE

The Safety and Toxicity of Phage Therapy: A Review of Animal and Clinical Studies

(2021) Dan Liu et al.   Viruses-Basel

Ecology and molecular targets of hypermutation in the global microbiome

(2021) Simon Roux et al.   Nature Communications

Bacteriophages and the Immune System

(2021) Medeea Popescu et al.   Annual Review of Virology

Understanding the Complex Phage-Host Interactions in Biofilm Communities

(2021) Diana P. Pires et al.   Annual Review of Virology

Clinical Phage Microbiology: a suggested framework and recommendations for the in-vitro matching steps of phage therapy

(2021) Daniel Gelman et al.   Lancet Microbe

Organoids as host models for infection biology – a review of methods

(2021) Carmen Aguilar et al.   EXPERIMENTAL AND MOLECULAR MEDICINE

Rapid evolutionary turnover of mobile genetic elements drives bacterial resistance to phages

(2021) Fatima Aysha Hussain et al.   SCIENCE

European regulatory aspects of phage therapy: magistral phage preparations

(2021) Gilbert Verbeken et al.   Current Opinion in Virology

Evidence for the agricultural origin of resistance to multiple antimicrobials in Aspergillus fumigatus, a fungal pathogen of humans

(2021) S Earl Kang et al.   G3-Genes Genomes Genetics

Systematic exploration of Escherichia coli phage–host interactions with the BASEL phage collection

(2021) Enea Maffei et al.   PLOS BIOLOGY

Fitness trade-offs resulting from bacteriophage resistance potentiate synergistic antibacterial strategies

(2020) Mihnea R. Mangalea et al.   INFECTION AND IMMUNITY

Technology readiness levels: Shortcomings and improvement opportunities

(2020) Alison L. Olechowski et al.   Systems Engineering

Parallel Genomics Uncover Novel Enterococcal-Bacteriophage Interactions

(2020) Anushila Chatterjee et al.   mBio

Culture-enriched metagenomic sequencing enables in-depth profiling of the cystic fibrosis lung microbiota

(2020) Fiona J. Whelan et al.   Nature Microbiology

Animal Models to Translate Phage Therapy to Human Medicine

(2020) Alessia Brix et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Anti-CRISPR protein applications: natural brakes for CRISPR-Cas technologies

(2020) Nicole D. Marino et al.   NATURE METHODS

Application of Adaptive Evolution to Improve the Stability of Bacteriophages during Storage

(2020) Kelvin K. Kering et al.   Viruses-Basel

Escape mutations circumvent a tradeoff between resistance to a beta-lactam and resistance to a beta-lactamase inhibitor

(2020) Dor Russ et al.   Nature Communications

Innovation in AMR – the CARB-X Perspective

(2020) Richard Alm et al.   ACS Infectious Diseases

Tackling antimicrobial resistance in the COVID-19 pandemic

(2020) Haileyesus Getahun et al.   BULLETIN OF THE WORLD HEALTH ORGANIZATION

Standardized bacteriophage purification for personalized phage therapy

(2020) Tiffany Luong et al.   Nature Protocols

High-throughput discovery of phage receptors using transposon insertion sequencing of bacteria

(2020) Kaitlyn E. Kortright et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phage-Antibiotic Synergy Is Driven by a Unique Combination of Antibacterial Mechanism of Action and Stoichiometry

(2020) Carmen Gu Liu et al.   mBio

Good Manufacturing Practice (GMP) Compliance for Phage Therapy Medicinal Products

(2020) Laurent Bretaudeau et al.   Frontiers in Microbiology

Computational Basis for On-Demand Production of Diversified Therapeutic Phage Cocktails

(2020) Catherine M. Mageeney et al.   mSystems

Phage steering of antibiotic-resistance evolution in the bacterial pathogen, Pseudomonas aeruginosa

(2020) James Gurney et al.   Evolution Medicine and Public Health

Bacteriophages and the One Health Approach to Combat Multidrug Resistance: Is This the Way?

(2020) Mary Garvey   Antibiotics-Basel

The Israeli Phage Bank (IPB)

(2020) Ortal Yerushalmy et al.   Antibiotics-Basel

Phages and their potential to modulate the microbiome and immunity

(2020) Sara Federici et al.   Cellular & Molecular Immunology

Phage Therapy in the Resistance Era: Where Do We Stand and Where Are We Going?

(2020) Tiffany Luong et al.   CLINICAL THERAPEUTICS

Trading-off and trading-up in the world of bacteria–phage evolution

(2020) Alita R. Burmeister et al.   CURRENT BIOLOGY

Why big pharma has abandoned antibiotics

(2020) Benjamin Plackett   NATURE

Optimizing bacteriophage engineering through an accelerated evolution platform

(2020) Andrew H. Favor et al.   Scientific Reports

High-throughput mapping of the phage resistance landscape in E. coli

(2020) Vivek K. Mutalik et al.   PLOS BIOLOGY

Editorial: Manufacturing, Formulation and Delivery Issues for Phage Therapy to Become A Reality

(2020) Danish J. Malik et al.   Frontiers in Microbiology

Expanding the role of bacterial vaccines into life-course vaccination strategies and prevention of antimicrobial-resistant infections

(2020) Jan T. Poolman   npj Vaccines

Aminoglycoside Antibiotics Inhibit Mycobacteriophage Infection

(2020) Zheng Jiang et al.   Antibiotics-Basel

Ecology and evolution of antimicrobial resistance in bacterial communities

(2020) Michael J. Bottery et al.   ISME Journal

CRISPR RNA-guided integrases for high-efficiency, multiplexed bacterial genome engineering

(2020) Phuc Leo H. Vo et al.   NATURE BIOTECHNOLOGY

CheckV assesses the quality and completeness of metagenome-assembled viral genomes

(2020) Stephen Nayfach et al.   NATURE BIOTECHNOLOGY

RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation

(2020) Wenjun Li et al.   NUCLEIC ACIDS RESEARCH

Antibiotic resistance surveillance systems: A review

(2020) Ousmane Oumou Diallo et al.   Journal of Global Antimicrobial Resistance

The one health problem of azole resistance in Aspergillus fumigatus: current insights and future research agenda

(2020) Paul E. Verweij et al.   Fungal Biology Reviews

Phage Therapy: Towards a Successful Clinical Trial

(2020) Andrzej Górski et al.   Antibiotics-Basel

Unlocking the next generation of phage therapy: the key is in the receptors

(2020) Fernando L Gordillo Altamirano et al.   CURRENT OPINION IN BIOTECHNOLOGY

Enhancing phage therapy through synthetic biology and genome engineering

(2020) Bryan R Lenneman et al.   CURRENT OPINION IN BIOTECHNOLOGY

Phage Therapy in the Postantibiotic Era

(2019) Fernando L. Gordillo Altamirano et al.   CLINICAL MICROBIOLOGY REVIEWS

Dual-barcoded shotgun expression library sequencing for high-throughput characterization of functional traits in bacteria

(2019) Vivek K. Mutalik et al.   Nature Communications

Human and Extracellular DNA Depletion for Metagenomic Analysis of Complex Clinical Infection Samples Yields Optimized Viable Microbiome Profiles

(2019) Maria T. Nelson et al.   Cell Reports

Directed in Vitro Evolution of Therapeutic Bacteriophages: The Appelmans Protocol

(2019) Ben Burrowes et al.   Viruses-Basel

Drug combinations: a strategy to extend the life of antibiotics in the 21st century

(2019) Mike Tyers et al.   NATURE REVIEWS MICROBIOLOGY

Phage therapy: What factors shape phage pharmacokinetics and bioavailability? Systematic and critical review

(2019) Krystyna Dąbrowska   MEDICINAL RESEARCH REVIEWS

Specifying Technology Readiness Levels (TRL) for the Chemical Industry

(2019) Georg A. Buchner et al.   INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH

Phage Therapy: A Renewed Approach to Combat Antibiotic-Resistant Bacteria

(2019) Kaitlyn E. Kortright et al.   Cell Host & Microbe

Generating robust and informative nonclinical in vitro and in vivo bacterial infection model efficacy data to support translation to humans

(2019) Jürgen B. Bulitta et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Assessing evolutionary risks of resistance for new antimicrobial therapies

(2019) Michael A. Brockhurst et al.   Nature Ecology & Evolution

Lysocins: Bioengineered Antimicrobials That Deliver Lysins across the Outer Membrane of Gram-Negative Bacteria

(2019) Ryan D. Heselpoth et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

PHANOTATE: a novel approach to gene identification in phage genomes

(2019) Katelyn McNair et al.   BIOINFORMATICS

multiPhATE: bioinformatics pipeline for functional annotation of phage isolates

(2019) Carol L Ecale Zhou et al.   BIOINFORMATICS

Antibiotic Adjuvants: Make Antibiotics Great Again!

(2019) Hana Douafer et al.   JOURNAL OF MEDICINAL CHEMISTRY

Cas13-induced cellular dormancy prevents the rise of CRISPR-resistant bacteriophage

(2019) Alexander J. Meeske et al.   NATURE

Engineered bacteriophages for treatment of a patient with a disseminated drug-resistant Mycobacterium abscessus

(2019) Rebekah M. Dedrick et al.   NATURE MEDICINE

Current State of Compassionate Phage Therapy

(2019) McCallin et al.   Viruses-Basel

Cystic Fibrosis Rapid Response: Translating Multi-omics Data into Clinically Relevant Information

(2019) Ana Georgina Cobián Güemes et al.   mBio

Phage Therapy in the Twenty-First Century: Facing the Decline of The Antibiotic Era; Is it Finally Time for The Age of the Phage?

(2019) Shayla Hesse et al.   Annual Review of Microbiology

EcoFABs: advancing microbiome science through standardized fabricated ecosystems

(2019) Karsten Zengler et al.   NATURE METHODS

Building a global alliance of biofoundries

(2019) Nathan Hillson et al.   Nature Communications

Use some antibiotics more and others less to stem resistance, says WHO

(2019) Elisabeth Mahase   BMJ-British Medical Journal

iMicrobe: Tools and data-driven discovery platform for the microbiome sciences

(2019) Ken Youens-Clark et al.   GigaScience

Experimental Microbiomes: Models Not to Scale

(2019) Marc G. Chevrette et al.   mSystems

Phage resistance evolution in vitro is not reflective of in vivo outcome in a plant‐bacteria‐phage system

(2019) Catherine A. Hernandez et al.   EVOLUTION

Simple animal models for microbiome research

(2019) Angela E. Douglas   NATURE REVIEWS MICROBIOLOGY

Deciphering the Ecology of Cystic Fibrosis Bacterial Communities: Towards Systems-Level Integration

(2019) Annamaria Bevivino et al.   TRENDS IN MOLECULAR MEDICINE

Resistance Evolution against Phage Combinations Depends on the Timing and Order of Exposure

(2019) Rosanna C. T. Wright et al.   mBio

Engineering Phage Host-Range and Suppressing Bacterial Resistance through Phage Tail Fiber Mutagenesis

(2019) Kevin Yehl et al.   CELL

Stronger together? Perspectives on phage-antibiotic synergy in clinical applications of phage therapy

(2019) Anca M Segall et al.   CURRENT OPINION IN MICROBIOLOGY

Pharmacologically Aware Phage Therapy: Pharmacodynamic and Pharmacokinetic Obstacles to Phage Antibacterial Action in Animal and Human Bodies

(2019) Krystyna Dąbrowska et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Antibiotic development — economic, regulatory and societal challenges

(2019) Christine Årdal et al.   NATURE REVIEWS MICROBIOLOGY

The global preclinical antibacterial pipeline

(2019) Ursula Theuretzbacher et al.   NATURE REVIEWS MICROBIOLOGY

Promises and Pitfalls of In Vivo Evolution to Improve Phage Therapy

(2019) James J. Bull et al.   Viruses-Basel

Reprogramming Bacteriophage Host Range through Structure-Guided Design of Chimeric Receptor Binding Proteins

(2019) Matthew Dunne et al.   Cell Reports

Evolutionary stability of collateral sensitivity to antibiotics in the model pathogen Pseudomonas aeruginosa

(2019) Camilo Barbosa et al.   eLife

Constructing and Characterizing Bacteriophage Libraries for Phage Therapy of Human Infections

(2019) Shelley B. Gibson et al.   Frontiers in Microbiology

Engineered bacteriophages as programmable biocontrol agents

(2019) Phil Huss et al.   CURRENT OPINION IN BIOTECHNOLOGY

Biological challenges of phage therapy and proposed solutions: a literature review

(2019) Katherine M Caflisch et al.   Expert Review of Anti-Infective Therapy

The emergence of adaptive laboratory evolution as an efficient tool for biological discovery and industrial biotechnology

(2019) Troy E. Sandberg et al.   METABOLIC ENGINEERING

Using Selection by Nonantibiotic Stressors to Sensitize Bacteria to Antibiotics

(2019) Jeff Maltas et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phage combination therapies for bacterial wilt disease in tomato

(2019) Xiaofang Wang et al.   NATURE BIOTECHNOLOGY

Food-to-Humans Bacterial Transmission

(2019) Patrícia Antunes et al.   Microbiology Spectrum

Multifaceted Impacts of Bacteriophages in the Plant Microbiome

(2018) Britt Koskella et al.   Annual Review of Phytopathology

Drug-Driven Phenotypic Convergence Supports Rational Treatment Strategies of Chronic Infections

(2018) Lejla Imamovic et al.   CELL

Multiple mechanisms drive phage infection efficiency in nearly identical hosts

(2018) Cristina Howard-Varona et al.   ISME Journal

Efficient genome engineering of a virulent Klebsiella bacteriophage using CRISPR-Cas9

(2018) Juntao Shen et al.   JOURNAL OF VIROLOGY

Discovery, research, and development of new antibiotics: the WHO priority list of antibiotic-resistant bacteria and tuberculosis

(2018) Evelina Tacconelli et al.   LANCET INFECTIOUS DISEASES

KBase: The United States Department of Energy Systems Biology Knowledgebase

(2018) Adam P Arkin et al.   NATURE BIOTECHNOLOGY

Cross-genus rebooting of custom-made, synthetic bacteriophage genomes in L-form bacteria

(2018) Samuel Kilcher et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterizing Phage Genomes for Therapeutic Applications

(2018) Casandra Philipson et al.   Viruses-Basel

Framing the Future with Bacteriophages in Agriculture

(2018) Antonet Svircev et al.   Viruses-Basel

The Magistral Phage

(2018) Jean-Paul Pirnay et al.   Viruses-Basel

Phage Therapy: What Have We Learned?

(2018) Andrzej Górski et al.   Viruses-Basel

Expert Opinion on Three Phage Therapy Related Topics: Bacterial Phage Resistance, Phage Training and Prophages in Bacterial Production Strains

(2018) Christine Rohde et al.   Viruses-Basel

Which experimental systems should we use for human microbiome science?

(2018) Angela E. Douglas   PLOS BIOLOGY

Phage-Based Applications in Synthetic Biology

(2018) Sebastien Lemire et al.   Annual Review of Virology

A one-health approach to antimicrobial resistance

(2018) Timothy R. Walsh   Nature Microbiology

Metagenome analysis of Russian and Georgian Pyophage cocktails and a placebo-controlled safety trial of single phage versus phage cocktail in healthy Staphylococcus aureus carriers

(2018) Shawna McCallin et al.   ENVIRONMENTAL MICROBIOLOGY

Mutant phenotypes for thousands of bacterial genes of unknown function

(2018) Morgan N. Price et al.   NATURE

Targeting mechanisms of tailed bacteriophages

(2018) Franklin L. Nobrega et al.   NATURE REVIEWS MICROBIOLOGY

Epistatic control of intrinsic resistance by virulence genes in Listeria

(2018) Mariela Scortti et al.   PLoS Genetics

Efficacy and tolerability of a cocktail of bacteriophages to treat burn wounds infected by Pseudomonas aeruginosa (PhagoBurn): a randomised, controlled, double-blind phase 1/2 trial

(2018) Patrick Jault et al.   LANCET INFECTIOUS DISEASES

VFDB 2019: a comparative pathogenomic platform with an interactive web interface

(2018) Bo Liu et al.   NUCLEIC ACIDS RESEARCH

ICEberg 2.0: an updated database of bacterial integrative and conjugative elements

(2018) Meng Liu et al.   NUCLEIC ACIDS RESEARCH

Technologies to address antimicrobial resistance

(2018) Stephen J. Baker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Engineering Bacteriophages as Versatile Biologics

(2018) Samuel Kilcher et al.   TRENDS IN MICROBIOLOGY

Cross-resistance is modular in bacteria–phage interactions

(2018) Rosanna C. T. Wright et al.   PLOS BIOLOGY

Genome-wide CRISPR-dCas9 screens in E. coli identify essential genes and phage host factors

(2018) François Rousset et al.   PLoS Genetics

Enabling genetic analysis of diverse bacteria with Mobile-CRISPRi

(2018) Jason M. Peters et al.   Nature Microbiology

Experimental evolution and the dynamics of adaptation and genome evolution in microbial populations

(2017) Richard E Lenski   ISME Journal

Extending the Host Range of Bacteriophage Particles for DNA Transduction

(2017) Ido Yosef et al.   MOLECULAR CELL

High‐throughput CRISPRi phenotyping identifies new essential genes in Streptococcus pneumoniae

(2017) Xue Liu et al.   Molecular Systems Biology

Different drugs for bad bugs: antivirulence strategies in the age of antibiotic resistance

(2017) Seth W. Dickey et al.   NATURE REVIEWS DRUG DISCOVERY

Antibody–Antibiotic Conjugates: A Novel Therapeutic Platform against Bacterial Infections

(2017) Sanjeev Mariathasan et al.   TRENDS IN MOLECULAR MEDICINE

Associations among Antibiotic and Phage Resistance Phenotypes in Natural and Clinical Escherichia coli Isolates

(2017) Richard C. Allen et al.   mBio

What is adaptation by natural selection? Perspectives of an experimental microbiologist

(2017) Richard E. Lenski   PLoS Genetics

Intriguing Interaction of Bacteriophage-Host Association: An Understanding in the Era of Omics

(2017) Krupa M. Parmar et al.   Frontiers in Microbiology

Bacteriophages and Bacterial Plant Diseases

(2017) Colin Buttimer et al.   Frontiers in Microbiology

Phage Tail–Like Bacteriocins

(2017) Dean Scholl   Annual Review of Virology

Construction and Analysis of Two Genome-Scale Deletion Libraries for Bacillus subtilis

(2017) Byoung-Mo Koo et al.   Cell Systems

The Bacterial Mobile Resistome Transfer Network Connecting the Animal and Human Microbiomes

(2016) Yongfei Hu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

CRISPRDetect: A flexible algorithm to define CRISPR arrays

(2016) Ambarish Biswas et al.   BMC GENOMICS

Critical review on biofilm methods

(2016) Joana Azeredo et al.   CRITICAL REVIEWS IN MICROBIOLOGY

iVirus: facilitating new insights in viral ecology with software and community data sets imbedded in a cyberinfrastructure

(2016) Benjamin Bolduc et al.   ISME Journal

Bacteriophage therapy: a regulatory perspective

(2016) Eric Pelfrene et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Identification of Essential Genes in the Salmonella Phage SPN3US Reveals Novel Insights into Giant Phage Head Structure and Assembly

(2016) Julie A. Thomas et al.   JOURNAL OF VIROLOGY

Understanding the mechanisms and drivers of antimicrobial resistance

(2016) Alison H Holmes et al.   LANCET

Alternatives to antibiotics—a pipeline portfolio review

(2016) Lloyd Czaplewski et al.   LANCET INFECTIOUS DISEASES

Genetically Engineered Phages: a Review of Advances over the Last Decade

(2016) Diana P. Pires et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Toward a Predictive Understanding of Earth’s Microbiomes to Address 21st Century Challenges

(2016) Martin J. Blaser et al.   mBio

Phage Therapy in the Era of Synthetic Biology

(2016) E. Magda Barbu et al.   Cold Spring Harbor Perspectives in Biology

Genetically manipulated phages with improved pH resistance for oral administration in veterinary medicine

(2016) Franklin L. Nobrega et al.   Scientific Reports

Next-Generation “-omics” Approaches Reveal a Massive Alteration of Host RNA Metabolism during Bacteriophage Infection of Pseudomonas aeruginosa

(2016) Anne Chevallereau et al.   PLoS Genetics

The FAIR Guiding Principles for scientific data management and stewardship

(2016) Mark D. Wilkinson et al.   Scientific Data

Phage selection restores antibiotic sensitivity in MDR Pseudomonas aeruginosa

(2016) Benjamin K. Chan et al.   Scientific Reports

In search of technology readiness level (TRL) 10

(2015) Jeremy Straub   AEROSPACE SCIENCE AND TECHNOLOGY

Re-establishing a place for phage therapy in western medicine

(2015) Elizabeth Martin Kutter et al.   Future Microbiology

Coevolution with Bacteriophages Drives Genome-Wide Host Evolution and Constrains the Acquisition of Abiotic-Beneficial Mutations

(2015) Pauline D. Scanlan et al.   MOLECULAR BIOLOGY AND EVOLUTION

Tackling antibiotic resistance: the environmental framework

(2015) Thomas U. Berendonk et al.   NATURE REVIEWS MICROBIOLOGY

Temperate and lytic bacteriophages programmed to sensitize and kill antibiotic-resistant bacteria

(2015) Ido Yosef et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phage therapy redux--What is to be done?

(2015) R. Young et al.   SCIENCE

Multidrug evolutionary strategies to reverse antibiotic resistance

(2015) M. Baym et al.   SCIENCE

A unified initiative to harness Earth's microbiomes

(2015) A. P. Alivisatos et al.   SCIENCE

The Tailocin Tale: Peeling off Phage Tails

(2015) Maarten G.K. Ghequire et al.   TRENDS IN MICROBIOLOGY

Collateral sensitivity of antibiotic-resistant microbes

(2015) Csaba Pál et al.   TRENDS IN MICROBIOLOGY

Independent Co-Option of a Tailed Bacteriophage into a Killing Complex in Pseudomonas

(2015) Kevin L. Hockett et al.   mBio

Rapid Quantification of Mutant Fitness in Diverse Bacteria by Sequencing Randomly Bar-Coded Transposons

(2015) Kelly M. Wetmore et al.   mBio

On-Demand Isolation of Bacteriophages Against Drug-Resistant Bacteria for Personalized Phage Therapy

(2015) Sari Mattila et al.   Frontiers in Microbiology

Engineering Modular Viral Scaffolds for Targeted Bacterial Population Editing

(2015) Hiroki Ando et al.   Cell Systems

Call for a Dedicated European Legal Framework for Bacteriophage Therapy

(2014) Gilbert Verbeken et al.   ARCHIVUM IMMUNOLOGIAE ET THERAPIAE EXPERIMENTALIS

Alternating antibiotic treatments constrain evolutionary paths to multidrug resistance

(2014) Seungsoo Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Synergy as a rationale for phage therapy using phage cocktails

(2014) Matthew Schmerer et al.   PeerJ

Phage cocktails and the future of phage therapy

(2013) Benjamin K Chan et al.   Future Microbiology

Functional requirements for bacteriophage growth: gene essentiality and expression in mycobacteriophage Giles

(2013) Rebekah M. Dedrick et al.   MOLECULAR MICROBIOLOGY

Understanding, predicting and manipulating the genotypic evolution of antibiotic resistance

(2013) Adam C. Palmer et al.   NATURE REVIEWS GENETICS

Gnotobiotic mouse model of phage-bacterial host dynamics in the human gut

(2013) A. Reyes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High-resolution view of bacteriophage lambda gene expression by ribosome profiling

(2013) X. Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Exploring the risks of phage application in the environment

(2013) Sean Meaden et al.   Frontiers in Microbiology

Repeatability and Contingency in the Evolution of a Key Innovation in Phage Lambda

(2012) J. R. Meyer et al.   SCIENCE

A fully decompressed synthetic bacteriophage øX174 genome assembled and archived in yeast

(2012) Paul R. Jaschke et al.   VIROLOGY

Combating Antimicrobial Resistance: Policy Recommendations to Save Lives

(2011)   CLINICAL INFECTIOUS DISEASES

The influence of external factors on bacteriophages—review

(2011) E. Jończyk et al.   FOLIA MICROBIOLOGICA

Phage Therapy for Plant Disease Control

(2010) B. Balogh et al.   CURRENT PHARMACEUTICAL BIOTECHNOLOGY

Bacteriophage for Biocontrol of Foodborne Pathogens: Calculations and Considerations

(2010) Steven Hagens et al.   CURRENT PHARMACEUTICAL BIOTECHNOLOGY

Phage Choice, Isolation, and Preparation for Phage Therapy

(2010) Jason Gill et al.   CURRENT PHARMACEUTICAL BIOTECHNOLOGY

Phage Therapy in Clinical Practice: Treatment of Human Infections

(2010) Elizabeth Kutter et al.   CURRENT PHARMACEUTICAL BIOTECHNOLOGY

Microtiter susceptibility testing of microbes growing on peg lids: a miniaturized biofilm model for high-throughput screening

(2010) Joe J Harrison et al.   Nature Protocols

Antibiotic resistance and its cost: is it possible to reverse resistance?

(2010) Dan I. Andersson et al.   NATURE REVIEWS MICROBIOLOGY

An Engineered R-Type Pyocin Is a Highly Specific and Sensitive Bactericidal Agent for the Food-Borne Pathogen Escherichia coli O157:H7

(2009) D. Scholl et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Drug interactions and the evolution of antibiotic resistance

(2009) Pamela J. Yeh et al.   NATURE REVIEWS MICROBIOLOGY

Setting the standard in synthetic biology

(2008) Adam Arkin   NATURE BIOTECHNOLOGY

Refinement and standardization of synthetic biological parts and devices

(2008) Barry Canton et al.   NATURE BIOTECHNOLOGY