EcoFABs: advancing microbiome science through standardized fabricated ecosystems

The social network of microorganisms — how auxotrophies shape complex communities

(2018) Karsten Zengler et al.   NATURE REVIEWS MICROBIOLOGY

Design of synthetic bacterial communities for predictable plant phenotypes

(2018) Sur Herrera Paredes et al.   PLOS BIOLOGY

Multi-lab EcoFAB study shows highly reproducible physiology and depletion of soil metabolites by a model grass

(2018) Joelle Sasse et al.   NEW PHYTOLOGIST

A communal catalogue reveals Earth’s multiscale microbial diversity

(2017) Luke R. Thompson et al.   NATURE

Spatial organization of a model 15-member human gut microbiota established in gnotobiotic mice

(2017) Jessica L. Mark Welch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Live imaging of root–bacteria interactions in a microfluidics setup

(2017) Hassan Massalha et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Research priorities for harnessing plant microbiomes in sustainable agriculture

(2017) Posy E. Busby et al.   PLOS BIOLOGY

A microfluidics-based in situ chemotaxis assay to study the behaviour of aquatic microbial communities

(2017) Bennett S. Lambert et al.   Nature Microbiology

Effect of flow and peristaltic mixing on bacterial growth in a gut-like channel

(2016) Jonas Cremer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Toward a Predictive Understanding of Earth’s Microbiomes to Address 21st Century Challenges

(2016) Martin J. Blaser et al.   mBio

Indigenous Bacteria from the Gut Microbiota Regulate Host Serotonin Biosynthesis

(2015) Jessica M. Yano et al.   CELL

Contributions of microbiome and mechanical deformation to intestinal bacterial overgrowth and inflammation in a human gut-on-a-chip

(2015) Hyun Jung Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An in vitro model for the growth and analysis of chronic wound MRSA biofilms

(2011) A.M. Agostinho et al.   JOURNAL OF APPLIED MICROBIOLOGY

The RootChip: An Integrated Microfluidic Chip for Plant Science

(2011) G. Grossmann et al.   PLANT CELL

Model organisms — A historical perspective

(2010) Bruno Müller et al.   Journal of Proteomics

The development of Arabidopsis as a model plant

(2010) Maarten Koornneef et al.   PLANT JOURNAL

Metagenetics: spending our inheritance on the future

(2009) Jo Handelsman   Microbial Biotechnology

Rules of Engagement: Interspecies Interactions that Regulate Microbial Communities

(2008) Ainslie E.F. Little et al.   Annual Review of Microbiology

Symbiotic conversations are revealed under genetic interrogation

(2008) Edward G. Ruby   NATURE REVIEWS MICROBIOLOGY

Microbial Biogeography: From Taxonomy to Traits

(2008) J. L. Green et al.   SCIENCE