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Title
The solid and liquid states of chromatin
Authors
Keywords
-
Journal
Epigenetics & Chromatin
Volume 14, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2021-10-31
DOI
10.1186/s13072-021-00424-5
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Note: Only part of the references are listed.- Polycomb Gene Silencing Mechanisms: PRC2 Chromatin Targeting, H3K27me3 'Readout', and Phase Separation-Based Compaction
- (2021) Yiran Guo et al. TRENDS IN GENETICS
- DNA length tunes the fluidity of DNA-based condensates
- (2021) Fernando Muzzopappa et al. BIOPHYSICAL JOURNAL
- Loci-specific phase separation of FET fusion oncoproteins promotes gene transcription
- (2021) Linyu Zuo et al. Nature Communications
- Transcription organizes euchromatin via microphase separation
- (2021) Lennart Hilbert et al. Nature Communications
- Single molecule microscopy reveals key physical features of repair foci in living cells
- (2021) Judith Miné-Hattab et al. eLife
- 1,6-hexanediol rapidly immobilizes and condenses chromatin in living human cells
- (2021) Yuji Itoh et al. Life Science Alliance
- Is transcriptional regulation just going through a phase?
- (2021) Geeta J. Narlikar et al. MOLECULAR CELL
- Nucleosome plasticity is a critical element of chromatin liquid–liquid phase separation and multivalent nucleosome interactions
- (2021) Stephen E. Farr et al. Nature Communications
- It’s not just a phase: function and characteristics of RNA-binding proteins in phase separation
- (2021) Hannah J. Wiedner et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- HP1α is a chromatin crosslinker that controls nuclear and mitotic chromosome mechanics
- (2021) Amy R Strom et al. eLife
- Liquid-like chromatin in the cell: What can we learn from imaging and computational modeling?
- (2021) Yuji Itoh et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Liquid-Liquid Phase Separation of Histone Proteins in Cells: Role in Chromatin Organization
- (2020) Anisha Shakya et al. BIOPHYSICAL JOURNAL
- Rett syndrome-causing mutations compromise MeCP2-mediated liquid–liquid phase separation of chromatin
- (2020) Liang Wang et al. CELL RESEARCH
- Mechanism of Long-Range Chromosome Motion Triggered by Gene Activation
- (2020) Anqi Wang et al. DEVELOPMENTAL CELL
- Phase-separation in chromatin organization
- (2020) Geeta J Narlikar JOURNAL OF BIOSCIENCES
- Mouse Heterochromatin Adopts Digital Compaction States without Showing Hallmarks of HP1-Driven Liquid-Liquid Phase Separation
- (2020) Fabian Erdel et al. MOLECULAR CELL
- Correlative three-dimensional super-resolution and block-face electron microscopy of whole vitreously frozen cells
- (2020) David P. Hoffman et al. SCIENCE
- A Unified Linear Viscoelastic Model of the Cell Nucleus Defines the Mechanical Contributions of Lamins and Chromatin
- (2020) Oren Wintner et al. Advanced Science
- Chromatin Viscoelasticity Measured by Local Dynamic Analysis
- (2020) Anat Vivante et al. BIOPHYSICAL JOURNAL
- Heterochromatin-Driven Nuclear Softening Protects the Genome against Mechanical Stress-Induced Damage
- (2020) Michele M. Nava et al. CELL
- Biophysical mechanisms of chromatin patterning
- (2020) Fabian Erdel CURRENT OPINION IN GENETICS & DEVELOPMENT
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- (2020) Lukas Frank et al. JOURNAL OF MOLECULAR BIOLOGY
- Liquid network connectivity regulates the stability and composition of biomolecular condensates with many components
- (2020) Jorge R. Espinosa et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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- (2020) Kazuhiro Maeshima et al. CURRENT OPINION IN CELL BIOLOGY
- Two-Parameter Mobility Assessments Discriminate Diverse Regulatory Factor Behaviors in Chromatin
- (2020) Jonathan Lerner et al. MOLECULAR CELL
- MeCP2 links heterochromatin condensates and neurodevelopmental disease
- (2020) Charles H. Li et al. NATURE
- Cohesin promotes stochastic domain intermingling to ensure proper regulation of boundary-proximal genes
- (2020) Jennifer M. Luppino et al. NATURE GENETICS
- Cohesin-Dependent and -Independent Mechanisms Mediate Chromosomal Contacts between Promoters and Enhancers
- (2020) Michiel J. Thiecke et al. Cell Reports
- Rett mutations attenuate phase separation of MeCP2
- (2020) Chunyan Fan et al. Cell Discovery
- Genome-Scale Imaging of the 3D Organization and Transcriptional Activity of Chromatin
- (2020) Jun-Han Su et al. CELL
- Near-atomic resolution structures of interdigitated nucleosome fibres
- (2020) Zenita Adhireksan et al. Nature Communications
- Chromatin arranges in chains of mesoscale domains with nanoscale functional topography independent of cohesin
- (2020) Ezequiel Miron et al. Science Advances
- Transcriptional suppression of ribosomal DNA with phase separation
- (2020) Satoru Ide et al. Science Advances
- Condensed Chromatin Behaves like a Solid on the Mesoscale In Vitro and in Living Cells
- (2020) Hilmar Strickfaden et al. CELL
- Chromatin: Liquid or Solid?
- (2020) Alexandra Zidovska CELL
- Cell cycle– and genomic distance–dependent dynamics of a discrete chromosomal region
- (2019) Hanhui Ma et al. JOURNAL OF CELL BIOLOGY
- Single nucleosome imaging reveals loose genome chromatin networks via active RNA polymerase II
- (2019) Ryosuke Nagashima et al. JOURNAL OF CELL BIOLOGY
- Deformation Microscopy for Dynamic Intracellular and Intranuclear Mapping of Mechanics with High Spatiotemporal Resolution
- (2019) Soham Ghosh et al. Cell Reports
- Evolving SAXS versatility: solution X-ray scattering for macromolecular architecture, functional landscapes, and integrative structural biology
- (2019) Chris A Brosey et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Phase separation of Polycomb-repressive complex 1 is governed by a charged disordered region of CBX2
- (2019) Aaron J. Plys et al. GENES & DEVELOPMENT
- Physicochemical mechanotransduction alters nuclear shape and mechanics via heterochromatin formation
- (2019) Andrew D. Stephens et al. MOLECULAR BIOLOGY OF THE CELL
- Histone Modifications Regulate Chromatin Compartmentalization by Contributing to a Phase Separation Mechanism
- (2019) Liang Wang et al. MOLECULAR CELL
- Pol II phosphorylation regulates a switch between transcriptional and splicing condensates
- (2019) Yang Eric Guo et al. NATURE
- Organization of fast and slow chromatin revealed by single-nucleosome dynamics
- (2019) S. S. Ashwin et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Organization of Chromatin by Intrinsic and Regulated Phase Separation
- (2019) Bryan A. Gibson et al. CELL
- Evaluating phase separation in live cells: diagnosis, caveats, and functional consequences
- (2019) David T. McSwiggen et al. GENES & DEVELOPMENT
- HP1 reshapes nucleosome core to promote phase separation of heterochromatin
- (2019) S. Sanulli et al. NATURE
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- (2018) Kazuhiro Maeshima et al. CURRENT BIOLOGY
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- (2018) Carmen Morales et al. CURRENT OPINION IN CELL BIOLOGY
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- (2018) Jitendra Thakur et al. GENES & DEVELOPMENT
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- (2018) Wanqing Xiang et al. JOURNAL OF CELL BIOLOGY
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- (2018) Andrew D. Stephens et al. MOLECULAR BIOLOGY OF THE CELL
- Structural Basis of Heterochromatin Formation by Human HP1
- (2018) Shinichi Machida et al. MOLECULAR CELL
- Formation of correlated chromatin domains at nanoscale dynamic resolution during transcription
- (2018) Haitham A Shaban et al. NUCLEIC ACIDS RESEARCH
- CRISPR/Cas9-mediated knock-in of an optimized TetO repeat for live cell imaging of endogenous loci
- (2018) Ipek Tasan et al. NUCLEIC ACIDS RESEARCH
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- (2018) Bo Gu et al. SCIENCE
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- Epichromatin and chromomeres: a ‘fuzzy’ perspective
- (2018) Donald E. Olins et al. Open Biology
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- (2018) Andrew Seeber et al. Annual Review of Genetics
- Correction: Correlative live and super-resolution imaging reveals the dynamic structure of replication domains
- (2018) Wanqing Xiang et al. JOURNAL OF CELL BIOLOGY
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- (2018) Huasong Lu et al. NATURE
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- (2018) Hongtao Chen et al. NATURE GENETICS
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- (2018) Yongdae Shin et al. CELL
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- (2018) Shuai Zhao et al. CELL RESEARCH
- Nuclear condensates of the Polycomb protein chromobox 2 (CBX2) assemble through phase separation
- (2018) Roubina Tatavosian et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- A nucleosome-free region locally abrogates histone H1–dependent restriction of linker DNA accessibility in chromatin
- (2018) Laxmi Narayan Mishra et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Highly disordered histone H1−DNA model complexes and their condensates
- (2018) Abigail L. Turner et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Super-resolution chromatin tracing reveals domains and cooperative interactions in single cells
- (2018) Bogdan Bintu et al. SCIENCE
- Cohesion and cohesin-dependent chromatin organization
- (2018) Tomoko Nishiyama CURRENT OPINION IN CELL BIOLOGY
- Regulation of Nucleosome Stacking and Chromatin Compaction by the Histone H4 N-Terminal Tail–H2A Acidic Patch Interaction
- (2017) Qinming Chen et al. JOURNAL OF MOLECULAR BIOLOGY
- Nucleosome–nucleosome interactions via histone tails and linker DNA regulate nuclear rigidity
- (2017) Yuta Shimamoto et al. MOLECULAR BIOLOGY OF THE CELL
- Chromatin and lamin A determine two different mechanical response regimes of the cell nucleus
- (2017) Andrew D. Stephens et al. MOLECULAR BIOLOGY OF THE CELL
- Dynamic Organization of Chromatin Domains Revealed by Super-Resolution Live-Cell Imaging
- (2017) Tadasu Nozaki et al. MOLECULAR CELL
- Phase separation drives heterochromatin domain formation
- (2017) Amy R. Strom et al. NATURE
- Liquid droplet formation by HP1α suggests a role for phase separation in heterochromatin
- (2017) Adam G. Larson et al. NATURE
- Biomolecular condensates: organizers of cellular biochemistry
- (2017) Salman F. Banani et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Single-molecule compaction of megabase-long chromatin molecules by multivalent cations
- (2017) Anatoly Zinchenko et al. NUCLEIC ACIDS RESEARCH
- Liquid phase condensation in cell physiology and disease
- (2017) Yongdae Shin et al. SCIENCE
- Visualization of Chromatin Decompaction and Break Site Extrusion as Predicted by Statistical Polymer Modeling of Single-Locus Trajectories
- (2017) Assaf Amitai et al. Cell Reports
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- (2017) Ritsuko Arai et al. Scientific Reports
- Nucleosomal arrays self‐assemble into supramolecular globular structures lacking 30‐nm fibers
- (2016) Kazuhiro Maeshima et al. EMBO JOURNAL
- Ubiquitin utilizes an acidic surface patch to alter chromatin structure
- (2016) Galia T Debelouchina et al. Nature Chemical Biology
- Phase Separation: Linking Cellular Compartmentalization to Disease
- (2016) Adriano Aguzzi et al. TRENDS IN CELL BIOLOGY
- Dynamic and flexible H3K9me3 bridging via HP1β dimerization establishes a plastic state of condensed chromatin
- (2016) Kyoko Hiragami-Hamada et al. Nature Communications
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- (2016) V. O. Chagin et al. Nature Communications
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- (2016) Laxmi N. Mishra et al. Scientific Reports
- Dynamic Nucleosome Movement Provides Structural Information of Topological Chromatin Domains in Living Human Cells
- (2016) Soya Shinkai et al. PLoS Computational Biology
- Chromatin Fibers Are Formed by Heterogeneous Groups of Nucleosomes In Vivo
- (2015) Maria Aurelia Ricci et al. CELL
- Abundance of intrinsic structural disorder in the histone H1 subtypes
- (2015) Andrzej Kowalski COMPUTATIONAL BIOLOGY AND CHEMISTRY
- Nuclear bodies: the emerging biophysics of nucleoplasmic phases
- (2015) Lian Zhu et al. CURRENT OPINION IN CELL BIOLOGY
- Structural and functional diversity of Topologically Associating Domains
- (2015) Job Dekker et al. FEBS LETTERS
- It’s Raining Liquids: RNA Tunes Viscoelasticity and Dynamics of Membraneless Organelles
- (2015) Lin Guo et al. MOLECULAR CELL
- Why the activity of a gene depends on its neighbors
- (2015) Alexander Feuerborn et al. TRENDS IN GENETICS
- Liquid demixing of intrinsically disordered proteins is seeded by poly(ADP-ribose)
- (2015) Matthias Altmeyer et al. Nature Communications
- The tethering of chromatin to the nuclear envelope supports nuclear mechanics
- (2015) Sarah M. Schreiner et al. Nature Communications
- Liquid-Liquid Phase Separation in Biology
- (2014) Anthony A. Hyman et al. Annual Review of Cell and Developmental Biology
- A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping
- (2014) Suhas S.P. Rao et al. CELL
- HSP70 Transgene Directed Motion to Nuclear Speckles Facilitates Heat Shock Activation
- (2014) Nimish Khanna et al. CURRENT BIOLOGY
- Higher chromatin mobility supports totipotency and precedes pluripotency in vivo
- (2014) A. Bo kovi et al. GENES & DEVELOPMENT
- Sumoylated Human Histone H4 Prevents Chromatin Compaction by Inhibiting Long-range Internucleosomal Interactions
- (2014) Abhinav Dhall et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- A Distinct Switch in Interactions of the Histone H4 Tail Domain upon Salt-dependent Folding of Nucleosome Arrays
- (2014) Sharon Pepenella et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Assemblages: Functional units formed by cellular phase separation
- (2014) Jeffrey A. Toretsky et al. JOURNAL OF CELL BIOLOGY
- Chromatin structure revealed by X-ray scattering analysis and computational modeling
- (2014) Kazuhiro Maeshima et al. METHODS
- Phosphorylation-Regulated Binding of RNA Polymerase II to Fibrous Polymers of Low-Complexity Domains
- (2013) Ilmin Kwon et al. CELL
- Dynamic Imaging of Genomic Loci in Living Human Cells by an Optimized CRISPR/Cas System
- (2013) Baohui Chen et al. CELL
- SAM Domain Polymerization Links Subnuclear Clustering of PRC1 to Gene Silencing
- (2013) Kyoichi Isono et al. DEVELOPMENTAL CELL
- Cohesin and the nucleolus constrain the mobility of spontaneous repair foci
- (2013) Vincent Dion et al. EMBO REPORTS
- High-throughput chromatin motion tracking in living yeast reveals the flexibility of the fiber throughout the genome
- (2013) Houssam Hajjoul et al. GENOME RESEARCH
- The role of the nucleosome acidic patch in modulating higher order chromatin structure
- (2013) A. A. Kalashnikova et al. Journal of the Royal Society Interface
- Micron-scale coherence in interphase chromatin dynamics
- (2013) A. Zidovska et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells
- (2013) J. Zuin et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Three-Dimensional Folding and Functional Organization Principles of the Drosophila Genome
- (2012) Tom Sexton et al. CELL
- Transcription factories: genetic programming in three dimensions
- (2012) Lucas Brandon Edelman et al. CURRENT OPINION IN GENETICS & DEVELOPMENT
- Short nucleosome repeats impose rotational modulations on chromatin fibre folding
- (2012) Sarah J Correll et al. EMBO JOURNAL
- Human mitotic chromosomes consist predominantly of irregularly folded nucleosome fibres without a 30-nm chromatin structure
- (2012) Yoshinori Nishino et al. EMBO JOURNAL
- Open and closed domains in the mouse genome are configured as 10-nm chromatin fibres
- (2012) Eden Fussner et al. EMBO REPORTS
- PCGF Homologs, CBX Proteins, and RYBP Define Functionally Distinct PRC1 Family Complexes
- (2012) Zhonghua Gao et al. MOLECULAR CELL
- Topological domains in mammalian genomes identified by analysis of chromatin interactions
- (2012) Jesse R. Dixon et al. NATURE
- Spatial partitioning of the regulatory landscape of the X-inactivation centre
- (2012) Elphège P. Nora et al. NATURE
- The polyelectrolyte properties of chromatin
- (2012) Nikolay Korolev et al. Soft Matter
- Local Nucleosome Dynamics Facilitate Chromatin Accessibility in Living Mammalian Cells
- (2012) Saera Hihara et al. Cell Reports
- Chromosomes without a 30-nm chromatin fiber
- (2012) Yasumasa Joti et al. Nucleus
- Chromodomain-Mediated Oligomerization of HP1 Suggests a Nucleosome-Bridging Mechanism for Heterochromatin Assembly
- (2011) Daniele Canzio et al. MOLECULAR CELL
- Histone H2B ubiquitylation disrupts local and higher-order chromatin compaction
- (2011) Beat Fierz et al. Nature Chemical Biology
- The spatial dynamics of tissue-specific promoters during C. elegans development
- (2010) P. Meister et al. GENES & DEVELOPMENT
- Role of Direct Interactions between the Histone H4 Tail and the H2A Core in Long Range Nucleosome Contacts
- (2010) Divya Sinha et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- The effects of histone H4 tail acetylations on cation-induced chromatin folding and self-association
- (2010) Abdollah Allahverdi et al. NUCLEIC ACIDS RESEARCH
- Chromosome Territories
- (2010) T. Cremer et al. Cold Spring Harbor Perspectives in Biology
- Determinants of Histone H4 N-terminal Domain Function during Nucleosomal Array Oligomerization
- (2009) Steven J. McBryant et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
- (2009) E. Lieberman-Aiden et al. SCIENCE
- Macromolecular Crowding and Confinement: Biochemical, Biophysical, and Potential Physiological Consequences
- (2008) Huan-Xiang Zhou et al. Annual Review of Biophysics
- Genome-wide profiling of salt fractions maps physical properties of chromatin
- (2008) S. Henikoff et al. GENOME RESEARCH
- The facultative heterochromatin of the inactive X chromosome has a distinctive condensed ultrastructure
- (2008) A. Rego et al. JOURNAL OF CELL SCIENCE
- DNA Curtains and Nanoscale Curtain Rods: High-Throughput Tools for Single Molecule Imaging
- (2008) Teresa Fazio et al. LANGMUIR
- The H4 Tail Domain Participates in Intra- and Internucleosome Interactions with Protein and DNA during Folding and Oligomerization of Nucleosome Arrays
- (2008) P.-Y. Kan et al. MOLECULAR AND CELLULAR BIOLOGY
- Analysis of cryo-electron microscopy images does not support the existence of 30-nm chromatin fibers in mitotic chromosomes in situ
- (2008) M. Eltsov et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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