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Title
Tapping Diversity From the Wild: From Sampling to Implementation
Authors
Keywords
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Journal
Frontiers in Plant Science
Volume 12, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2021-01-27
DOI
10.3389/fpls.2021.626565
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- (2020) Florian Privé et al. MOLECULAR BIOLOGY AND EVOLUTION
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- (2020) Matthew J.S. Gibson et al. MOLECULAR ECOLOGY
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- (2020) Coline C. Jaworski et al. Molecular Ecology Resources
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- (2020) Hannah L. Nicholls et al. Frontiers in Genetics
- Major Impacts of Widespread Structural Variation on Gene Expression and Crop Improvement in Tomato
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- (2020) Marco Todesco et al. NATURE
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- (2020) Jędrzej Szymański et al. NATURE GENETICS
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- (2020) Gayacharan et al. PLoS One
- Multiple wheat genomes reveal global variation in modern breeding
- (2020) Sean Walkowiak et al. NATURE
- Crop wild relatives of the United States require urgent conservation action
- (2020) Colin K. Khoury et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- LFMM 2: Fast and accurate inference of gene-environment associations in genome-wide studies
- (2019) Kevin Caye et al. MOLECULAR BIOLOGY AND EVOLUTION
- Edit at Will: Genotype Independent Plant Transformation in the Era of Advanced Genomics and Genome Editing
- (2019) Albert P. Kausch et al. PLANT SCIENCE
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- (2019) Baobao Wang et al. Molecular Plant
- CRISPR/Cas Genome Editing and Precision Plant Breeding in Agriculture
- (2019) Kunling Chen et al. Annual Review of Plant Biology
- De Novo Domestication: An Alternative Route toward New Crops for the Future
- (2019) Alisdair R. Fernie et al. Molecular Plant
- Exome sequencing highlights the role of wild-relative introgression in shaping the adaptive landscape of the wheat genome
- (2019) Fei He et al. NATURE GENETICS
- Evolutionary Insights into the Nature of Plant Domestication
- (2019) Michael D. Purugganan CURRENT BIOLOGY
- Variation in Recombination Rate Is Shaped by Domestication and Environmental Conditions in Barley
- (2019) Steven Dreissig et al. MOLECULAR BIOLOGY AND EVOLUTION
- Identification of loci controlling adaptation in Chinese soya bean landraces via a combination of conventional and bioclimatic GWAS
- (2019) Ying‐hui Li et al. PLANT BIOTECHNOLOGY JOURNAL
- Climate change has likely already affected global food production
- (2019) Deepak K. Ray et al. PLoS One
- Comparative transcriptome analysis of pigeonpea, Cajanus cajan (L.) and one of its wild relatives Cajanus platycarpus (Benth.) Maesen
- (2019) Maniraj Rathinam et al. PLoS One
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- (2019) L. L. Qi et al. THEORETICAL AND APPLIED GENETICS
- Analysis of genetic diversity of Ficus carica L. (Moraceae) collection using simple sequence repeat (SSR) markers
- (2019) Ilaria Marcotuli et al. Acta Scientiarum Polonorum-Hortorum Cultus
- Sampling strategy optimization to increase statistical power in landscape genomics: a simulation‐based approach
- (2019) Oliver Selmoni et al. Molecular Ecology Resources
- Potential adaptive strategies for 29 sub-Saharan crops under future climate change
- (2019) Samuel Pironon et al. Nature Climate Change
- ImaGene: a convolutional neural network to quantify natural selection from genomic data
- (2019) Luis Torada et al. BMC BIOINFORMATICS
- The impact of sample selection strategies on genetic diversity and representativeness in germplasm bank collections
- (2019) Jorge Franco-Duran et al. BMC PLANT BIOLOGY
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- (2019) Kai‐Hua Jia et al. Evolutionary Applications
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- (2019) Christina B Azodi et al. PLANT CELL
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- (2019) Ronald C. Estoque et al. SCIENCE OF THE TOTAL ENVIRONMENT
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- (2018) Michael Halewood et al. NEW PHYTOLOGIST
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- (2016) Joanne Russell et al. NATURE GENETICS
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- (2016) Rachel S Meyer et al. NATURE GENETICS
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- (2016) Rebecca Jordan et al. NEW PHYTOLOGIST
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- Global nitrogen budgets in cereals: A 50-year assessment for maize, rice, and wheat production systems
- (2016) J. K. Ladha et al. Scientific Reports
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- (2015) Sariel Hübner et al. BMC PLANT BIOLOGY
- A practical guide to environmental association analysis in landscape genomics
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- A new FST-based method to uncover local adaptation using environmental variables
- (2015) Pierre de Villemereuil et al. Methods in Ecology and Evolution
- Ecogeography and utility to plant breeding of the crop wild relatives of sunflower (Helianthus annuus L.)
- (2015) Michael B. Kantar et al. Frontiers in Plant Science
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- (2014) Jeremy B. Yoder et al. GENETICS
- PopGenome: An Efficient Swiss Army Knife for Population Genomic Analyses in R
- (2014) Bastian Pfeifer et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genome-wide admixture and ecological niche modelling reveal the maintenance of species boundaries despite long history of interspecific gene flow
- (2014) Amanda R. De La Torre et al. MOLECULAR ECOLOGY
- Efficient multivariate linear mixed model algorithms for genome-wide association studies
- (2014) Xiang Zhou et al. NATURE METHODS
- Increasing homogeneity in global food supplies and the implications for food security
- (2014) C. K. Khoury et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Robust Identification of Local Adaptation from Allele Frequencies
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- The advantages and limitations of trait analysis with GWAS: a review
- (2013) Arthur Korte et al. Plant Methods
- The FIGS (Focused Identification of Germplasm Strategy) Approach Identifies Traits Related to Drought Adaptation in Vicia faba Genetic Resources
- (2013) Hamid Khazaei et al. PLoS One
- Patterns and processes in crop domestication: an historical review and quantitative analysis of 203 global food crops
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- RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
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- Food Security: The Challenge of Feeding 9 Billion People
- (2010) H. C. J. Godfray et al. SCIENCE
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- (2009) John N. Williams et al. DIVERSITY AND DISTRIBUTIONS
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