Multiple wheat genomes reveal global variation in modern breeding

The NLR-Annotator tool enables annotation of the intracellular immune receptor repertoire

(2020) Burkhard Steuernagel et al.   PLANT PHYSIOLOGY

A roadmap for gene functional characterisation in crops with large genomes: Lessons from polyploid wheat

(2020) Nikolai M Adamski et al.   eLife

A haplotype-led approach to increase the precision of wheat breeding

(2020) Jemima Brinton et al.   Communications Biology

Undesired fertility restoration in msm1 barley associates with two mTERF genes

(2019) Timm Bernhard et al.   THEORETICAL AND APPLIED GENETICS

A large-scale pedigree resource of wheat reveals evidence for adaptation and selection by breeders

(2019) Nick Fradgley et al.   PLOS BIOLOGY

Durum wheat genome highlights past domestication signatures and future improvement targets

(2019) Marco Maccaferri et al.   NATURE GENETICS

Tracing the ancestry of modern bread wheats

(2019) Caroline Pont et al.   NATURE GENETICS

Publisher Correction: Exome sequencing highlights the role of wild-relative introgression in shaping the adaptive landscape of the wheat genome

(2019) Fei He et al.   NATURE GENETICS

Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype

(2019) Daehwan Kim et al.   NATURE BIOTECHNOLOGY

Haplotype block analysis of an Argentinean hexaploid wheat collection and GWAS for yield components and adaptation

(2019) Silvana Marisol Luján Basile et al.   BMC PLANT BIOLOGY

Minimap2: pairwise alignment for nucleotide sequences

(2018) Heng Li   BIOINFORMATICS

Pan-genome analysis highlights the extent of genomic variation in cultivated and wild rice

(2018) Qiang Zhao et al.   NATURE GENETICS

Advances in Wheat and Pathogen Genomics: Implications for Disease Control

(2018) Beat Keller et al.   Annual Review of Phytopathology

Discovery of multi-megabase polymorphic inversions by chromosome conformation capture sequencing in large-genome plant species

(2018) Axel Himmelbach et al.   PLANT JOURNAL

A wheat cytochrome P450 enhances both resistance to deoxynivalenol and grain yield

(2018) Lokanadha R. Gunupuru et al.   PLoS One

Shifting the limits in wheat research and breeding using a fully annotated reference genome

(2018) et al.   SCIENCE

Patterns of polymorphism and selection in the subgenomes of the allopolyploid Arabidopsis kamchatica

(2018) Timothy Paape et al.   Nature Communications

Genomic innovation for crop improvement

(2017) Michael W. Bevan et al.   NATURE

Genome sequence of the progenitor of the wheat D genome Aegilops tauschii

(2017) Ming-Cheng Luo et al.   NATURE

A chromosome conformation capture ordered sequence of the barley genome

(2017) Martin Mascher et al.   NATURE

The pangenome of hexaploid bread wheat

(2017) Juan D. Montenegro et al.   PLANT JOURNAL

Wild emmer genome architecture and diversity elucidate wheat evolution and domestication

(2017) Raz Avni et al.   SCIENCE

Taxonomic structure and functional association of foxtail millet root microbiome

(2017) Tao Jin et al.   GigaScience

Cytological identification of an Aegilops variabilis chromosome carrying stripe rust resistance in wheat

(2016) Laibin Zhao et al.   BREEDING SCIENCE

The 2NS Translocation from Confers Resistance to the Pathotype of

(2016) C.D. Cruz et al.   CROP SCIENCE

Conserved but Attenuated Parental Gene Expression in Allopolyploids: Constitutive Zinc Hyperaccumulation in the AllotetraploidArabidopsis kamchatica

(2016) Timothy Paape et al.   MOLECULAR BIOLOGY AND EVOLUTION

Rapid cloning of disease-resistance genes in plants using mutagenesis and sequence capture

(2016) Burkhard Steuernagel et al.   NATURE BIOTECHNOLOGY

Redefining the structural motifs that determine RNA binding and RNA editing by pentatricopeptide repeat proteins in land plants

(2016) Shifeng Cheng et al.   PLANT JOURNAL

Inbreeding drives maize centromere evolution

(2016) Kevin L. Schneider et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A saturated SNP linkage map for the orange wheat blossom midge resistance gene Sm1

(2016) Mulualem T. Kassa et al.   THEORETICAL AND APPLIED GENETICS

Tight repulsion linkage between Sr36 and Sr39 was revealed by genetic, cytogenetic and molecular analyses

(2016) Bosco Chemayek et al.   THEORETICAL AND APPLIED GENETICS

De Novo Centromere Formation and Centromeric Sequence Expansion in Wheat and its Wide Hybrids

(2016) Xiang Guo et al.   PLoS Genetics

Evolutionary plasticity of restorer-of-fertility-like proteins in rice

(2016) Joanna Melonek et al.   Scientific Reports

Stable Patterns of CENH3 Occupancy Through Maize Lineages Containing Genetically Similar Centromeres

(2015) Jonathan I. Gent et al.   GENETICS

PGSB PlantsDB: updates to the database framework for comparative plant genome research

(2015) Manuel Spannagl et al.   NUCLEIC ACIDS RESEARCH

Stable Patterns of CENH3 Occupancy Through Maize Lineages Containing Genetically Similar Centromeres

(2015) Jonathan I. Gent et al.   GENETICS

A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes

(2015) Katherine W Jordan et al.   GENOME BIOLOGY

Structure and Stability of Telocentric Chromosomes in Wheat

(2015) Dal-Hoe Koo et al.   PLoS One

Structural variations in plant genomes

(2014) R. K. Saxena et al.   Briefings in Functional Genomics

Oligonucleotides replacing the roles of repetitive sequences pAs1, pSc119.2, pTa-535, pTa71, CCS1, and pAWRC.1 for FISH analysis

(2014) Zongxiang Tang et al.   JOURNAL OF APPLIED GENETICS

Ancient hybridizations among the ancestral genomes of bread wheat

(2014) T. Marcussen et al.   SCIENCE

A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome

(2014) et al.   SCIENCE

Genomic and chromosomal distribution patterns of various repeated DNA sequences in wheat revealed by a fluorescence in situ hybridization procedure

(2013) Shirabe Komuro et al.   GENOME

Hybrid breeding in wheat: technologies to improve hybrid wheat seed production

(2013) Ryan Whitford et al.   JOURNAL OF EXPERIMENTAL BOTANY

Allele Characterization of Genes Required for rpg4-Mediated Wheat Stem Rust Resistance Identifies Rpg5 as the R Gene

(2013) D. Arora et al.   PHYTOPATHOLOGY

Targeted re-sequencing of the allohexaploid wheat exome

(2012) Mark O. Winfield et al.   PLANT BIOTECHNOLOGY JOURNAL

Bread matters: a national initiative to profile the genetic diversity of Australian wheat

(2012) David Edwards et al.   PLANT BIOTECHNOLOGY JOURNAL

Wheat centromeric retrotransposons: the new ones take a major role in centromeric structure

(2012) Baochun Li et al.   PLANT JOURNAL

Unity hard red spring wheat

(2010) S L Fox et al.   CANADIAN JOURNAL OF PLANT SCIENCE

A unique wheat disease resistance-like gene governs effector-triggered susceptibility to necrotrophic pathogens

(2010) J. D. Faris et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The stem rust resistance gene Rpg5 encodes a protein with nucleotide-binding-site, leucine-rich, and protein kinase domains

(2008) R. Brueggeman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA