Nutrition, IBD and Gut Microbiota: A Review

The microbiota programs DNA methylation to control intestinal homeostasis and inflammation

(2020) Ihab Ansari et al.   Nature Microbiology

Vegetarian or gluten-free diets in patients with inflammatory bowel disease are associated with lower psychological well-being and a different gut microbiota, but no beneficial effects on the course of the disease

(2019) Philipp Schreiner et al.   United European Gastroenterology Journal

Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases

(2019) Jason Lloyd-Price et al.   NATURE

A randomized, 6-week trial of low-FODMAP diet in patients with Inflammatory Bowel Disease

(2019) Giorgia Bodini et al.   NUTRITION

Impact of Food Additives on Gut Homeostasis

(2019) Laudisi et al.   Nutrients

Protein fermentation in the gut; implications for intestinal dysfunction in humans, pigs and poultry

(2018) Myrthe Suzanne Gilbert et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

Smoking and the intestinal microbiome

(2018) Ziv Savin et al.   ARCHIVES OF MICROBIOLOGY

DNA Methylation and Transcription Patterns in Intestinal Epithelial Cells From Pediatric Patients With Inflammatory Bowel Diseases Differentiate Disease Subtypes and Associate With Outcome

(2018) Kate Joanne Howell et al.   GASTROENTEROLOGY

Nutritional Interventions in the Patient with Inflammatory Bowel Disease

(2018) Berkeley N. Limketkai et al.   GASTROENTEROLOGY CLINICS OF NORTH AMERICA

Determinants of IBD Heritability: Genes, Bugs, and More

(2018) Williams Turpin et al.   INFLAMMATORY BOWEL DISEASES

Circulating and Fecal microRNAs as Biomarkers for Inflammatory Bowel Diseases

(2018) Katharina Schönauen et al.   INFLAMMATORY BOWEL DISEASES

Adherence to the Mediterranean Diet and Inflammatory Markers

(2018) Antoni Sureda et al.   Nutrients

Genome-wide DNA Methylation in Treatment-naïve Ulcerative Colitis

(2018) Hagar Taman et al.   Journal of Crohns & Colitis

Influence of Dietary Restriction on Irritable Bowel Syndrome

(2018) Afrin Kamal et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

Patient’s Dietary Beliefs and Behaviours in Inflammatory Bowel Disease

(2018) Jeanne H.M. de Vries et al.   DIGESTIVE DISEASES

No association of alcohol use and the risk of ulcerative colitis or Crohn’s disease: data from a European Prospective cohort study (EPIC)

(2017) M M Bergmann et al.   EUROPEAN JOURNAL OF CLINICAL NUTRITION

Mediterranean diet and multiple health outcomes: an umbrella review of meta-analyses of observational studies and randomised trials

(2017) M Dinu et al.   EUROPEAN JOURNAL OF CLINICAL NUTRITION

Diet as a Trigger or Therapy for Inflammatory Bowel Diseases

(2017) James D. Lewis et al.   GASTROENTEROLOGY

Systematic Review and Meta-analysis

(2017) Neeraj Narula et al.   INFLAMMATORY BOWEL DISEASES

Fermentable Carbohydrates [FODMAPs] Exacerbate Functional Gastrointestinal Symptoms in Patients With Inflammatory Bowel Disease: A Randomised, Double-blind, Placebo-controlled, Cross-over, Re-challenge Trial

(2017) Selina R Cox et al.   Journal of Crohns & Colitis

How to institute the low-FODMAP diet

(2017) Jacqueline S Barrett   JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY

Exploring the genetic architecture of inflammatory bowel disease by whole-genome sequencing identifies association at ADCY7

(2017) Yang Luo et al.   NATURE GENETICS

Genome-wide association study implicates immune activation of multiple integrin genes in inflammatory bowel disease

(2017) Katrina M de Lange et al.   NATURE GENETICS

Low-FODMAP diet reduces irritable bowel symptoms in patients with inflammatory bowel disease

(2017) Natalia Pedersen et al.   WORLD JOURNAL OF GASTROENTEROLOGY

Diet, Gut Microbiome and Epigenetics: Emerging Links with Inflammatory Bowel Diseases and Prospects for Management and Prevention

(2017) Krasimira Aleksandrova et al.   Nutrients

Association Between Breast Milk Bacterial Communities and Establishment and Development of the Infant Gut Microbiome

(2017) Pia S. Pannaraj et al.   JAMA Pediatrics

Epidemiology, demographic characteristics and prognostic predictors of ulcerative colitis

(2017) Bruno César da Silva et al.   WORLD JOURNAL OF GASTROENTEROLOGY

Patients Perceive Clinical Benefit with the Specific Carbohydrate Diet for Inflammatory Bowel Disease

(2016) David L. Suskind et al.   DIGESTIVE DISEASES AND SCIENCES

Intestinal Epithelial Toll-Like Receptor 4 Signaling Affects Epithelial Function and Colonic Microbiota and Promotes a Risk for Transmissible Colitis

(2016) Rishu Dheer et al.   INFECTION AND IMMUNITY

Clinical and Fecal Microbial Changes With Diet Therapy in Active Inflammatory Bowel Disease

(2016) David L. Suskind et al.   JOURNAL OF CLINICAL GASTROENTEROLOGY

Natural history of the infant gut microbiome and impact of antibiotic treatment on bacterial strain diversity and stability

(2016) Moran Yassour et al.   Science Translational Medicine

Antibiotics, birth mode, and diet shape microbiome maturation during early life

(2016) Nicholas A. Bokulich et al.   Science Translational Medicine

Integrative epigenome-wide analysis demonstrates that DNA methylation may mediate genetic risk in inflammatory bowel disease

(2016) N. T. Ventham et al.   Nature Communications

Therapeutic Potential to Modify the Mucus Barrier in Inflammatory Bowel Disease

(2016) Jing Sun et al.   Nutrients

Evidence for the Presence of Non-Celiac Gluten Sensitivity in Patients with Functional Gastrointestinal Symptoms: Results from a Multicenter Randomized Double-Blind Placebo-Controlled Gluten Challenge

(2016) Luca Elli et al.   Nutrients

Consistent Prebiotic Effect on Gut Microbiota With Altered FODMAP Intake in Patients with Crohn’s Disease: A Randomised, Controlled Cross-Over Trial of Well-Defined Diets

(2016) Emma P Halmos et al.   Clinical and Translational Gastroenterology

Prevalence of Inflammatory Bowel Disease Among Adults Aged ≥18 Years — United States, 2015

(2016) James M. Dahlhamer et al.   MMWR-MORBIDITY AND MORTALITY WEEKLY REPORT

Familial Risk of Inflammatory Bowel Disease: A Population-Based Cohort Study 1977–2011

(2015) Frederik Trier Moller et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

Dynamics and Stabilization of the Human Gut Microbiome during the First Year of Life

(2015) Fredrik Bäckhed et al.   Cell Host & Microbe

Nonceliac Gluten Sensitivity

(2015) Alessio Fasano et al.   GASTROENTEROLOGY

High-level adherence to a Mediterranean diet beneficially impacts the gut microbiota and associated metabolome

(2015) Francesca De Filippis et al.   GUT

Functional Impacts of the Intestinal Microbiome in the Pathogenesis of Inflammatory Bowel Disease

(2015) Jennifer Li et al.   INFLAMMATORY BOWEL DISEASES

Combinatorial Effects of Diet and Genetics on Inflammatory Bowel Disease Pathogenesis

(2015) Laura J. Dixon et al.   INFLAMMATORY BOWEL DISEASES

Heritability in Inflammatory Bowel Disease

(2015) Hannah Gordon et al.   INFLAMMATORY BOWEL DISEASES

Dietary emulsifiers impact the mouse gut microbiota promoting colitis and metabolic syndrome

(2015) Benoit Chassaing et al.   NATURE

Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations

(2015) Jimmy Z Liu et al.   NATURE GENETICS

Commensal bacteria direct selective cargo sorting to promote symbiosis

(2015) Qin Zhang et al.   NATURE IMMUNOLOGY

The epidemiology of inflammatory bowel disease

(2015) Johan Burisch et al.   SCANDINAVIAN JOURNAL OF GASTROENTEROLOGY

The Specific Carbohydrate Diet for Inflammatory Bowel Disease: A Case Series

(2015) Samir Kakodkar et al.   Journal of the Academy of Nutrition and Dietetics

Inflammatory Bowel Disease: Genetics, Epigenetics, and Pathogenesis

(2015) Italia Loddo et al.   Frontiers in Immunology

Genetic studies of Crohn's disease: Past, present and future

(2014) Jimmy Z. Liu et al.   BEST PRACTICE & RESEARCH IN CLINICAL GASTROENTEROLOGY

The Treatment-Naive Microbiome in New-Onset Crohn’s Disease

(2014) Dirk Gevers et al.   Cell Host & Microbe

MicroRNAs: new players in IBD

(2014) R Kalla et al.   GUT

Linking Immunity, Epigenetics, and Cancer in Inflammatory Bowel Disease

(2014) Jan Däbritz et al.   INFLAMMATORY BOWEL DISEASES

Prevalence of a Gluten-free Diet and Improvement of Clinical Symptoms in Patients with Inflammatory Bowel Diseases

(2014) Hans H. Herfarth et al.   INFLAMMATORY BOWEL DISEASES

The gut microbiota, bacterial metabolites and colorectal cancer

(2014) Petra Louis et al.   NATURE REVIEWS MICROBIOLOGY

An anti-inflammatory diet as treatment for inflammatory bowel disease: a case series report

(2014) Barbara C Olendzki et al.   Nutrition Journal

Epidemiological studies of migration and environmental risk factors in the inflammatory bowel diseases

(2014) Yanna Ko   WORLD JOURNAL OF GASTROENTEROLOGY

Nutritional consequences of celiac disease and the gluten-free diet

(2014) Thimmaiah G Theethira et al.   Expert Review of Gastroenterology & Hepatology

The emerging role of miRNAs in inflammatory bowel disease: a review

(2014) Christopher G. Chapman et al.   Therapeutic Advances in Gastroenterology

Inflammatory bowel disease epidemiology

(2013) Johan Burisch et al.   CURRENT OPINION IN GASTROENTEROLOGY

Beyond Gene Discovery in Inflammatory Bowel Disease: The Emerging Role of Epigenetics

(2013) Nicholas T. Ventham et al.   GASTROENTEROLOGY

Genetic Variants Synthesize to Produce Paneth Cell Phenotypes That Define Subtypes of Crohn's Disease

(2013) Kelli L. VanDussen et al.   GASTROENTEROLOGY

Western diet induces dysbiosis with increasedE coliin CEABAC10 mice,alters host barrier function favouring AIEC colonisation

(2013) Margarita Martinez-Medina et al.   GUT

A decrease of the butyrate-producing speciesRoseburia hominisandFaecalibacterium prausnitziidefines dysbiosis in patients with ulcerative colitis

(2013) Kathleen Machiels et al.   GUT

Dietary Polyunsaturated Fatty Acids and Inflammation: The Role of Phospholipid Biosynthesis

(2013) William Raphael et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Recent developments in the treatment of inflammatory bowel disease

(2013) Svend T. Rietdijk et al.   Journal of Digestive Diseases

Diet, microbes, and host genetics: the perfect storm in inflammatory bowel diseases

(2013) Vanessa Leone et al.   JOURNAL OF GASTROENTEROLOGY

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

The role of the immune system in governing host-microbe interactions in the intestine

(2013) Eric M Brown et al.   NATURE IMMUNOLOGY

Nod2 Activates NF-kB in CD4+ T Cells but Its Expression Is Dispensable for T Cell-Induced Colitis

(2013) Galliano Zanello et al.   PLoS One

Prevalence of Symptoms Meeting Criteria for Irritable Bowel Syndrome in Inflammatory Bowel Disease: Systematic Review and Meta-Analysis

(2012) Stephen J Halpin et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

A High-Fat Diet Is Associated With Endotoxemia That Originates From the Gut

(2012) Swaroop Pendyala et al.   GASTROENTEROLOGY

Epigenetics: Concepts and relevance to IBD pathogenesis

(2012) Melania Scarpa et al.   INFLAMMATORY BOWEL DISEASES

Dietary-fat-induced taurocholic acid promotes pathobiont expansion and colitis in Il10 −/− mice

(2012) Suzanne Devkota et al.   NATURE

Diversity, stability and resilience of the human gut microbiota

(2012) Catherine A. Lozupone et al.   NATURE

Host–microbe interactions have shaped the genetic architecture of inflammatory bowel disease

(2012) Luke Jostins et al.   NATURE

Human gut microbiome viewed across age and geography

(2012) Tanya Yatsunenko et al.   NATURE

Regulated Virulence Controls the Ability of a Pathogen to Compete with the Gut Microbiota

(2012) N. Kamada et al.   SCIENCE

Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment

(2012) Xochitl C Morgan et al.   GENOME BIOLOGY

Dietary Intake and Risk of Developing Inflammatory Bowel Disease: A Systematic Review of the Literature

(2011) Jason K Hou et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

NLRP6 Inflammasome Regulates Colonic Microbial Ecology and Risk for Colitis

(2011) Eran Elinav et al.   CELL

A vegan or vegetarian diet substantially alters the human colonic faecal microbiota

(2011) J Zimmer et al.   EUROPEAN JOURNAL OF CLINICAL NUTRITION

Increasing Incidence and Prevalence of the Inflammatory Bowel Diseases With Time, Based on Systematic Review

(2011) Natalie A. Molodecky et al.   GASTROENTEROLOGY

Dysbiosis of the faecal microbiota in patients with Crohn's disease and their unaffected relatives

(2011) M. Joossens et al.   GUT

Genetics and pathogenesis of inflammatory bowel disease

(2011) Bernard Khor et al.   NATURE

Colonic mucosa-associated microbiota is influenced by an interaction of Crohn disease and FUT2 (Secretor) genotype

(2011) P. Rausch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

Pattern of alcohol consumption and its effect on gastrointestinal symptoms in inflammatory bowel disease

(2010) Garth R. Swanson et al.   ALCOHOL

Dietary poorly absorbed, short-chain carbohydrates increase delivery of water and fermentable substrates to the proximal colon

(2010) J. S. BARRETT et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

Animal Protein Intake and Risk of Inflammatory Bowel Disease: The E3N Prospective Study

(2010) Prévost Jantchou et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

Penetrance of NOD2/CARD15 genetic variants in the general population

(2010) S. Yazdanyar et al.   CANADIAN MEDICAL ASSOCIATION JOURNAL

Role of the gut microbiota in defining human health

(2010) Kei E Fujimura et al.   Expert Review of Anti-Infective Therapy

Fucosyltransferase 2 (FUT2) non-secretor status is associated with Crohn's disease

(2010) Dermot P.B. McGovern et al.   HUMAN MOLECULAR GENETICS

N-3 polyunsaturated fatty acid diet therapy for patients with inflammatory bowel disease

(2010) Kan Uchiyama et al.   INFLAMMATORY BOWEL DISEASES

Maintenance of remission in inflammatory bowel disease using omega-3 fatty acids (fish oil): A systematic review and meta-analyses

(2010) Dan Turner et al.   INFLAMMATORY BOWEL DISEASES

Disease phenotype and genotype are associated with shifts in intestinal-associated microbiota in inflammatory bowel diseases

(2010) Daniel N. Frank et al.   INFLAMMATORY BOWEL DISEASES

Manipulation of dietary short chain carbohydrates alters the pattern of gas production and genesis of symptoms in irritable bowel syndrome

(2010) Derrick K Ong et al.   JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

Has the Microbiota Played a Critical Role in the Evolution of the Adaptive Immune System?

(2010) Y. K. Lee et al.   SCIENCE

Comparison of the prevalence of fructose and lactose malabsorption across chronic intestinal disorders

(2009) J. S. BARRETT et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

Prebiotics in Chronic Intestinal Inflammation

(2009) Mirjam A.C. Looijer–Van Langen et al.   INFLAMMATORY BOWEL DISEASES

Butyrate utilization by the colonic mucosa in inflammatory bowel diseases

(2009) Ronan Thibault et al.   INFLAMMATORY BOWEL DISEASES

Effects of wheat germ agglutinin on human gastrointestinal epithelium: Insights from an experimental model of immune/epithelial cell interaction

(2009) Chiara Dalla Pellegrina et al.   TOXICOLOGY AND APPLIED PHARMACOLOGY

XBP1 Links ER Stress to Intestinal Inflammation and Confers Genetic Risk for Human Inflammatory Bowel Disease

(2008) Arthur Kaser et al.   CELL

Changes in Gut Microbiota Control Metabolic Endotoxemia-Induced Inflammation in High-Fat Diet-Induced Obesity and Diabetes in Mice

(2008) P. D. Cani et al.   DIABETES

Diet in the Aetiology of Ulcerative Colitis: A European Prospective Cohort Study

(2008) Andrew R. Hart et al.   DIGESTION

Microbial Influences in Inflammatory Bowel Diseases

(2008) R. Balfour Sartor   GASTROENTEROLOGY

Omega-3 Free Fatty Acids for the Maintenance of Remission in Crohn Disease

(2008) Brian G. Feagan et al.   JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION

A key role for autophagy and the autophagy gene Atg16l1 in mouse and human intestinal Paneth cells

(2008) Ken Cadwell et al.   NATURE

Deletion polymorphism upstream of IRGM associated with altered IRGM expression and Crohn's disease

(2008) Steven A McCarroll et al.   NATURE GENETICS