Onward transmission of viruses: how do viruses emerge to cause epidemics after spillover?

Key Viral Adaptations Preceding the AIDS Pandemic

(2019) Daniel Sauter et al.   Cell Host & Microbe

Viruses in bats and potential spillover to animals and humans

(2019) Lin-Fa Wang et al.   Current Opinion in Virology

SIV Coreceptor Specificity in Natural and Non-Natural Host Infection: Implications for Cell Targeting and Differential Outcomes from Infection

(2018) Katherine S. Wetzel et al.   CURRENT HIV RESEARCH

Enhanced Human-Type Receptor Binding by Ferret-Transmissible H5N1 with a K193T Mutation

(2018) Wenjie Peng et al.   JOURNAL OF VIROLOGY

Complex and Dynamic Interactions between Parvovirus Capsids, Transferrin Receptors, and Antibodies Control Cell Infection and Host Range

(2018) Heather M. Callaway et al.   JOURNAL OF VIROLOGY

Complexities of Viral Mutation Rates

(2018) Kayla M. Peck et al.   JOURNAL OF VIROLOGY

Influenza Hemagglutinin Protein Stability, Activation, and Pandemic Risk

(2018) Charles J. Russell et al.   TRENDS IN MICROBIOLOGY

A decade of RNA virus metagenomics is (not) enough

(2018) Alexander L. Greninger   VIRUS RESEARCH

The 1918 Influenza Pandemic: one hundred years of progress, but where now?

(2018) Wendy Barclay et al.   Lancet Respiratory Medicine

Mutation and Epistasis in Influenza Virus Evolution

(2018) Daniel Lyons et al.   Viruses-Basel

The diversity, evolution and origins of vertebrate RNA viruses

(2018) Yong-Zhen Zhang et al.   Current Opinion in Virology

Mechanisms and Concepts in RNA Virus Population Dynamics and Evolution

(2018) Patrick T. Dolan et al.   Annual Review of Virology

Host and viral determinants of influenza A virus species specificity

(2018) Jason S. Long et al.   NATURE REVIEWS MICROBIOLOGY

Origin and evolution of pathogenic coronaviruses

(2018) Jie Cui et al.   NATURE REVIEWS MICROBIOLOGY

Emergence and adaptation of H3N2 canine influenza virus from avian influenza virus: An overlooked role of dogs in interspecies transmission

(2018) Wanting He et al.   Transboundary and Emerging Diseases

Modulation of Innate Immune Responses by the Influenza A NS1 and PA-X Proteins

(2018) Aitor Nogales et al.   Viruses-Basel

Novel insights into bat influenza A viruses

(2017) Kevin Ciminski et al.   JOURNAL OF GENERAL VIROLOGY

Innate Immune Responses of Bat and Human Cells to Filoviruses: Commonalities and Distinctions

(2017) Ivan V. Kuzmin et al.   JOURNAL OF VIROLOGY

Mammalian Adaptation of an Avian Influenza A Virus Involves Stepwise Changes in NS1

(2017) C. Chauché et al.   JOURNAL OF VIROLOGY

Pathways to zoonotic spillover

(2017) Raina K. Plowright et al.   NATURE REVIEWS MICROBIOLOGY

Evolution of selective-sequencing approaches for virus discovery and virome analysis

(2017) Arvind Kumar et al.   VIRUS RESEARCH

Influenza Virus Infection, Interferon Response, Viral Counter-Response, and Apoptosis

(2017) Jung Shim et al.   Viruses-Basel

Virus population dynamics during infection

(2017) Enzo Z Poirier et al.   Current Opinion in Virology

Evolutionary ecology of virus emergence

(2016) John J. Dennehy   Annals of the New York Academy of Sciences

DNA Damage Signaling Is Required for Replication of Human Bocavirus 1 DNA in Dividing HEK293 Cells

(2016) Xuefeng Deng et al.   JOURNAL OF VIROLOGY

Parvovirus Capsid Structures Required for Infection: Mutations Controlling Receptor Recognition and Protease Cleavages

(2016) Heather M. Callaway et al.   JOURNAL OF VIROLOGY

Species difference in ANP32A underlies influenza A virus polymerase host restriction

(2016) Jason S. Long et al.   NATURE

Viral factors in influenza pandemic risk assessment

(2016) Marc Lipsitch et al.   eLife

Origins of the 2009 H1N1 influenza pandemic in swine in Mexico

(2016) Ignacio Mena et al.   eLife

Prevalence of influenza A virus in live-captured North Atlantic gray seals: a possible wild reservoir

(2016) Wendy Blay Puryear et al.   Emerging Microbes & Infections

Moving On Out: Transport and Packaging of Influenza Viral RNA into Virions

(2016) Seema S. Lakdawala et al.   Annual Review of Virology

SnapShot: Antiviral Restriction Factors

(2015) Silvia F. Kluge et al.   CELL

MERS, SARS, and Ebola: The Role of Super-Spreaders in Infectious Disease

(2015) Gary Wong et al.   Cell Host & Microbe

Intermonomer Interactions in Hemagglutinin Subunits HA1 and HA2 Affecting Hemagglutinin Stability and Influenza Virus Infectivity

(2015) Wei Wang et al.   JOURNAL OF VIROLOGY

Intrinsic host restrictions to HIV-1 and mechanisms of viral escape

(2015) Viviana Simon et al.   NATURE IMMUNOLOGY

Origin of the HIV-1 group O epidemic in western lowland gorillas

(2015) Mirela D’arc et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reverse zoonosis of influenza to swine: new perspectives on the human–animal interface

(2015) Martha I. Nelson et al.   TRENDS IN MICROBIOLOGY

Evolutionary and Functional Analysis of Old World Primate TRIM5 Reveals the Ancient Emergence of Primate Lentiviruses and Convergent Evolution Targeting a Conserved Capsid Interface

(2015) Kevin R. McCarthy et al.   PLoS Pathogens

Parvovirus Family Conundrum: What Makes a Killer?

(2015) Shweta Kailasan et al.   Annual Review of Virology

Role of receptor binding specificity in influenza A virus transmission and pathogenesis

(2014) M. de Graaf et al.   EMBO JOURNAL

Assembling evidence for identifying reservoirs of infection

(2014) Mafalda Viana et al.   TRENDS IN ECOLOGY & EVOLUTION

Host-Specific Parvovirus Evolution in Nature Is Recapitulated by In Vitro Adaptation to Different Carnivore Species

(2014) Andrew B. Allison et al.   PLoS Pathogens

Review of Influenza A Virus in Swine Worldwide: A Call for Increased Surveillance and Research

(2013) A. Vincent et al.   Zoonoses and Public Health

A Strategy To Estimate Unknown Viral Diversity in Mammals

(2013) S. J. Anthony et al.   mBio

Efficient SIVcpz replication in human lymphoid tissue requires viral matrix protein adaptation

(2012) Frederic Bibollet-Ruche et al.   JOURNAL OF CLINICAL INVESTIGATION

Frequent Cross-Species Transmission of Parvoviruses among Diverse Carnivore Hosts

(2012) A. B. Allison et al.   JOURNAL OF VIROLOGY

A review of influenza haemagglutinin receptor binding as it relates to pandemic properties

(2012) Sam Wilks et al.   VACCINE

Evolutionary Reconstructions of the Transferrin Receptor of Caniforms Supports Canine Parvovirus Being a Re-emerged and Not a Novel Pathogen in Dogs

(2012) Jason T. Kaelber et al.   PLoS Pathogens

Pandemic (H1N1) 2009 virus revisited: An evolutionary retrospective

(2011) Mary C. Christman et al.   INFECTION GENETICS AND EVOLUTION

Interaction of the Influenza A Virus Polymerase PB2 C-terminal Region with Importin α Isoforms Provides Insights into Host Adaptation and Polymerase Assembly

(2011) Stephane Boivin et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Role of Multiple Hosts in the Cross-Species Transmission and Emergence of a Pandemic Parvovirus

(2011) A. B. Allison et al.   JOURNAL OF VIROLOGY

Microevolution of Canine Influenza Virus in Shelters and Its Molecular Epidemiology in the United States

(2010) J. J. Hayward et al.   JOURNAL OF VIROLOGY

Identifying genetic markers of adaptation for surveillance of viral host jumps

(2010) Kim M. Pepin et al.   NATURE REVIEWS MICROBIOLOGY

The emergence of parvoviruses of carnivores

(2010) Karin Hoelzer et al.   VETERINARY RESEARCH

Parallel Germline Infiltration of a Lentivirus in Two Malagasy Lemurs

(2009) Clément Gilbert et al.   PLoS Genetics

Phylogenetic analysis reveals the emergence, evolution and dispersal of carnivore parvoviruses

(2008) K. Hoelzer et al.   JOURNAL OF GENERAL VIROLOGY

Cross-Species Virus Transmission and the Emergence of New Epidemic Diseases

(2008) C. R. Parrish et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS