Emergence and adaptation of H3N2 canine influenza virus from avian influenza virus: An overlooked role of dogs in interspecies transmission

Multiple incursions and recurrent epidemic fade-out of H3N2 canine influenza A virus in the United States

(2018) Ian E.H. Voorhees et al.   JOURNAL OF VIROLOGY

Zoonotic Risk, Pathogenesis, and Transmission of Avian-Origin H3N2 Canine Influenza Virus

(2017) Hailiang Sun et al.   JOURNAL OF VIROLOGY

A Novel A(H7N2) Influenza Virus Isolated from a Veterinarian Caring for Cats in a New York City Animal Shelter Causes Mild Disease and Transmits Poorly in the Ferret Model

(2017) Jessica A. Belser et al.   JOURNAL OF VIROLOGY

Epidemiology, Evolution, and Pathogenesis of H7N9 Influenza Viruses in Five Epidemic Waves since 2013 in China

(2017) Shuo Su et al.   TRENDS IN MICROBIOLOGY

Comparative analysis estimates the relative frequencies of co-divergence and cross-species transmission within viral families

(2017) Jemma L. Geoghegan et al.   PLoS Pathogens

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Novel Polymerase Gene Mutations for Human Adaptation in Clinical Isolates of Avian H5N1 Influenza Viruses

(2016) Yasuha Arai et al.   PLoS Pathogens

Origins and Evolutionary Dynamics of H3N2 Canine Influenza Virus

(2015) Henan Zhu et al.   JOURNAL OF VIROLOGY

Less Is More: An Adaptive Branch-Site Random Effects Model for Efficient Detection of Episodic Diversifying Selection

(2015) Martin D. Smith et al.   MOLECULAR BIOLOGY AND EVOLUTION

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

H3N2 canine influenza virus with the matrix gene from the pandemic A/H1N1 virus: infection dynamics in dogs and ferrets

(2014) H. MOON et al.   EPIDEMIOLOGY AND INFECTION

A synchronized global sweep of the internal genes of modern avian influenza virus

(2014) Michael Worobey et al.   NATURE

Genomewide Analysis of Reassortment and Evolution of Human Influenza A(H3N2) Viruses Circulating between 1968 and 2011

(2013) K. B. Westgeest et al.   JOURNAL OF VIROLOGY

Adaptation of Avian Influenza A Virus Polymerase in Mammals To Overcome the Host Species Barrier

(2013) B. Manz et al.   JOURNAL OF VIROLOGY

Mammalian Adaptation in the PB2 Gene of Avian H5N1 Influenza Virus

(2013) J.-Y. Min et al.   JOURNAL OF VIROLOGY

FUBAR: A Fast, Unconstrained Bayesian AppRoximation for Inferring Selection

(2013) B. Murrell et al.   MOLECULAR BIOLOGY AND EVOLUTION

A novel canine influenza H3N2 virus isolated from cats in an animal shelter

(2013) Hye-Young Jeoung et al.   VETERINARY MICROBIOLOGY

Genetic characterization of canine influenza A virus (H3N2) in Thailand

(2013) Napawan Bunpapong et al.   VIRUS GENES

Airborne Transmission of Influenza A/H5N1 Virus Between Ferrets

(2012) S. Herfst et al.   SCIENCE

Detecting Individual Sites Subject to Episodic Diversifying Selection

(2012) Ben Murrell et al.   PLoS Genetics

A novel reassortant canine H3N1 influenza virus between pandemic H1N1 and canine H3N2 influenza viruses in Korea

(2011) D. Song et al.   JOURNAL OF GENERAL VIROLOGY

Genome-Scale Evolution and Phylodynamics of Equine H3N8 Influenza A Virus

(2011) P. R. Murcia et al.   JOURNAL OF VIROLOGY

Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology

(2010) W. Delport et al.   BIOINFORMATICS

Avian-origin H3N2 canine influenza A viruses in Southern China

(2010) Shoujun Li et al.   INFECTION GENETICS AND EVOLUTION

Full Factorial Analysis of Mammalian and Avian Influenza Polymerase Subunits Suggests a Role of an Efficient Polymerase for Virus Adaptation

(2009) Olive T. W. Li et al.   PLoS One

Experimental Evolution of Human Influenza Virus H3 Hemagglutinin in the Mouse Lung Identifies Adaptive Regions in HA1 and HA2

(2008) L. Keleta et al.   JOURNAL OF VIROLOGY

Correlating viral phenotypes with phylogeny: Accounting for phylogenetic uncertainty

(2007) Joe Parker et al.   INFECTION GENETICS AND EVOLUTION