Yeast cell death pathway requiring AP-3 vesicle trafficking leads to vacuole/lysosome membrane permeabilization

Toward a theory of evolution as multilevel learning

(2022) Vitaly Vanchurin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial gasdermins reveal an ancient mechanism of cell death

(2022) Alex G. Johnson et al.   SCIENCE

Saccharomyces cerevisiae Cells Lacking the Zinc Vacuolar Transporter Zrt3 Display Improved Ethanol Productivity in Lignocellulosic Hydrolysates

(2022) Joana Terra-Matos et al.   Journal of Fungi

NINJ1 mediates plasma membrane rupture during lytic cell death

(2021) Nobuhiko Kayagaki et al.   NATURE

Cryptococcal meningoencephalitis: time for action

(2021) Katharine Elizabeth Stott et al.   LANCET INFECTIOUS DISEASES

Regulation of Cell Death Induced by Acetic Acid in Yeasts

(2021) Susana R. Chaves et al.   Frontiers in Cell and Developmental Biology

Antiviral activity of bacterial TIR domains via immune signalling molecules

(2021) Gal Ofir et al.   NATURE

Adaptive Role of Cell Death in Yeast Communities Stressed with Macrolide Antifungals

(2021) N. A. Kireeva et al.   mSphere

TORC1 regulates vacuole membrane composition through ubiquitin- and ESCRT-dependent microautophagy

(2020) Xi Yang et al.   JOURNAL OF CELL BIOLOGY

Classification and Nomenclature of Metacaspases and Paracaspases: No More Confusion with Caspases

(2020) Elena A. Minina et al.   MOLECULAR CELL

A kinase cascade on the yeast lysosomal vacuole regulates its membrane dynamics: conserved kinase Env7 is phosphorylated by casein kinase Yck3

(2020) Surya P Manandhar et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Molecular characterization of a fungal gasdermin-like protein

(2020) Asen Daskalov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanistic insights on the mode of action of an antiproliferative thiosemicarbazone-nickel complex revealed by an integrated chemogenomic profiling study

(2020) Enrico Baruffini et al.   Scientific Reports

Expandable and reversible copy number amplification drives rapid adaptation to antifungal drugs

(2020) Robert T Todd et al.   eLife

A microscopy-based kinetic analysis of yeast vacuolar protein sorting

(2020) Jason C Casler et al.   eLife

AP‐3 vesicle uncoating occurs after HOPS‐dependent vacuole tethering

(2020) Jannis Schoppe et al.   EMBO JOURNAL

Mammary development in the embryo and adult: new insights into the journey of morphogenesis and commitment

(2020) Christine J. Watson et al.   DEVELOPMENT

Sensing and clearance of apoptotic cells

(2020) Shigekazu Nagata et al.   CURRENT OPINION IN IMMUNOLOGY

Targeting intrinsic cell death pathways to control fungal pathogens

(2019) Madhura Kulkarni et al.   BIOCHEMICAL PHARMACOLOGY

Auxin-Inducible Depletion of the Essentialome Suggests Inhibition of TORC1 by Auxins and Inhibition of Vrg4 by SDZ 90-215, a Natural Antifungal Cyclopeptide

(2019) Nathan A. Snyder et al.   G3-Genes Genomes Genetics

Whi2: a new player in amino acid sensing

(2019) Xinchen Teng et al.   CURRENT GENETICS

Meiotic viral attenuation through an ancestral apoptotic pathway

(2019) Jie Gao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular mechanisms of cell death: recommendations of the Nomenclature Committee on Cell Death 2018

(2018) Lorenzo Galluzzi et al.   CELL DEATH AND DIFFERENTIATION

NLR surveillance of essential SEC-9 SNARE proteins induces programmed cell death upon allorecognition in filamentous fungi

(2018) Jens Heller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comment on “Sterilizing immunity in the lung relies on targeting fungal apoptosis-like programmed cell death”

(2018) Abdel Aouacheria et al.   SCIENCE

HIV-1 Nefs Are Cargo-Sensitive AP-1 Trimerization Switches in Tetherin Downregulation

(2018) Kyle L. Morris et al.   CELL

Rab-Effector-Kinase Interplay Modulates Intralumenal Fragment Formation during Vacuole Fusion

(2018) Mahmoud Abdul Karim et al.   DEVELOPMENTAL CELL

Whi2 is a conserved negative regulator of TORC1 in response to low amino acids

(2018) Xianghui Chen et al.   PLoS Genetics

Spatially Distinct Pools of TORC1 Balance Protein Homeostasis

(2018) Riko Hatakeyama et al.   MOLECULAR CELL

Global burden of disease of HIV-associated cryptococcal meningitis: an updated analysis

(2017) Radha Rajasingham et al.   LANCET INFECTIOUS DISEASES

RNA-Seq-based transcriptomic and metabolomic analysis reveal stress responses and programmed cell death induced by acetic acid in Saccharomyces cerevisiae

(2017) Yachen Dong et al.   Scientific Reports

Using mixed inocula of Saccharomyces cerevisiae killer strains to improve the quality of traditional sparkling-wine

(2016) Rocío Velázquez et al.   FOOD MICROBIOLOGY

Inflammasome-activated gasdermin D causes pyroptosis by forming membrane pores

(2016) Xing Liu et al.   NATURE

Targeting BCL2 with Venetoclax in Relapsed Chronic Lymphocytic Leukemia

(2016) Andrew W. Roberts et al.   NEW ENGLAND JOURNAL OF MEDICINE

A LAPF/phafin1-like protein regulates TORC1 and lysosomal membrane permeabilization in response to endoplasmic reticulum membrane stress

(2015) Adam Kim et al.   MOLECULAR BIOLOGY OF THE CELL

Cell death in genome evolution

(2015) Xinchen Teng et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Atg27 Tyrosine Sorting Motif is Important for Its Trafficking and Atg9 Localization

(2015) Verónica A. Segarra et al.   TRAFFIC

Plasmids for C-terminal tagging inSaccharomyces cerevisiaethat contain improved GFP proteins, Envy and Ivy

(2015) Christian J. Slubowski et al.   YEAST

The AP-3 adaptor complex mediates sorting of yeast and mammalian PQ-loop-family basic amino acid transporters to the vacuolar/lysosomal membrane

(2015) Elisa Llinares et al.   Scientific Reports

In vivo CaspaseTracker biosensor system for detecting anastasis and non-apoptotic caspase activity

(2015) Ho Lam Tang et al.   Scientific Reports

Snf1/AMPK promotes the formation of Kog1/Raptor-bodies to increase the activation threshold of TORC1 in budding yeast

(2015) James E Hughes Hallett et al.   eLife

Virus-host arms race at the joint origin of multicellularity and programmed cell death

(2014) Jaime Iranzo et al.   CELL CYCLE

Dynamic association of the PI3P-interacting Mon1-Ccz1 GEF with vacuoles is controlled through its phosphorylation by the type 1 casein kinase Yck3

(2014) Gus Lawrence et al.   MOLECULAR BIOLOGY OF THE CELL

Homology-Integrated CRISPR–Cas (HI-CRISPR) System for One-Step Multigene Disruption in Saccharomyces cerevisiae

(2014) Zehua Bao et al.   ACS Synthetic Biology

Genome-wide identification of genes involved in the positive and negative regulation of acetic acid-induced programmed cell death in Saccharomyces cerevisiae

(2013) Marlene Sousa et al.   BMC GENOMICS

Structural Basis for Recruitment and Activation of the AP-1 Clathrin Adaptor Complex by Arf1

(2013) Xuefeng Ren et al.   CELL

Genome-wide Consequences of Deleting Any Single Gene

(2013) Xinchen Teng et al.   MOLECULAR CELL

Saccharomyces cerevisiae Genes Involved in Survival of Heat Shock

(2013) Stefanie Jarolim et al.   G3-Genes Genomes Genetics

Programmed nuclear destruction in yeast

(2012) Michael D. Eastwood et al.   Autophagy

Developmentally Programmed Nuclear Destruction during Yeast Gametogenesis

(2012) Michael D. Eastwood et al.   DEVELOPMENTAL CELL

The protective role of yeast Cathepsin D in acetic acid-induced apoptosis depends on ANT (Aac2p) but not on the voltage-dependent channel (Por1p)

(2012) Helena Pereira et al.   FEBS LETTERS

Vacuolar H+-ATPase (V-ATPase) Promotes Vacuolar Membrane Permeabilization and Nonapoptotic Death in Stressed Yeast

(2012) Hyemin Kim et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Cell Differentiation within a Yeast Colony: Metabolic and Regulatory Parallels with a Tumor-Affected Organism

(2012) Michal Čáp et al.   MOLECULAR CELL

Phosphoinositide-mediated clathrin adaptor progression at the trans-Golgi network

(2012) Lydia Daboussi et al.   NATURE CELL BIOLOGY

Bcl-xLregulates mitochondrial energetics by stabilizing the inner membrane potential

(2011) Ying-bei Chen et al.   JOURNAL OF CELL BIOLOGY

Gene-dependent cell death in yeast

(2011) X Teng et al.   Cell Death & Disease

The impact of acetate metabolism on yeast fermentative performance and wine quality: reduction of volatile acidity of grape musts and wines

(2010) Alice Vilela-Moura et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The Cvt pathway as a model for selective autophagy

(2010) Melinda A. Lynch-Day et al.   FEBS LETTERS

Phosphorylation of a membrane curvature–sensing motif switches function of the HOPS subunit Vps41 in membrane tethering

(2010) Margarita Cabrera et al.   JOURNAL OF CELL BIOLOGY

Mitochondrial degradation in acetic acid-induced yeast apoptosis: the role of Pep4 and the ADP/ATP carrier

(2010) Clara Pereira et al.   MOLECULAR MICROBIOLOGY

The evolution of eusociality

(2010) Martin A. Nowak et al.   NATURE

Efficient ER Exit and Vacuole Targeting of Yeast Sna2p Require Two Tyrosine-Based Sorting Motifs

(2010) Henri-François Renard et al.   TRAFFIC

The Yeast GRASP Grh1 Colocalizes with COPII and Is Dispensable for Organizing the Secretory Pathway

(2010) Stephanie K. Levi et al.   TRAFFIC

Dual Sorting of theSaccharomyces cerevisiaeVacuolar Protein Sna4p

(2009) W. Pokrzywa et al.   EUKARYOTIC CELL

Vertebrate Endothermy Restricts Most Fungi as Potential Pathogens

(2009) Vincent A. Robert et al.   JOURNAL OF INFECTIOUS DISEASES

Non-genetic origins of cell-to-cell variability in TRAIL-induced apoptosis

(2009) Sabrina L. Spencer et al.   NATURE

Fis1 deficiency selects for compensatory mutations responsible for cell death and growth control defects

(2008) W-C Cheng et al.   CELL DEATH AND DIFFERENTIATION

Efficient termination of vacuolar Rab GTPase signaling requires coordinated action by a GAP and a protein kinase

(2008) Christopher L. Brett et al.   JOURNAL OF CELL BIOLOGY

Genome-wide Analysis of AP-3–dependent Protein Transport in Yeast

(2008) Vikram C. Anand et al.   MOLECULAR BIOLOGY OF THE CELL