A Genome-Wide Association Study Pinpoints Quantitative Trait Genes for Plant Height, Heading Date, Grain Quality, and Yield in Rye (Secale cereale L.)

Genome-Wide Association Study on Total Starch, Amylose and Amylopectin in Barley Grain Reveals Novel Putative Alleles

(2021) Mengdi Li et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Genome-wide association study-based identification genes influencing agronomic traits in rice (Oryza sativa L.)

(2021) Aijun Wang et al.   GENOMICS

A global barley panel revealing genomic signatures of breeding in modern Australian cultivars

(2021) Camilla Beate Hill et al.   PLANT JOURNAL

Wheat amino acid transporters highly expressed in grain cells regulate amino acid accumulation in grain

(2021) Yongfang Wan et al.   PLoS One

Mapping and validating stem rust resistance genes directly in self-incompatible genetic resources of winter rye

(2021) Paul Gruner et al.   THEORETICAL AND APPLIED GENETICS

Heterosis and Hybrid Crop Breeding: A Multidisciplinary Review

(2021) Marlee R. Labroo et al.   Frontiers in Genetics

Genome-wide association study reveals the genetic basis of yield- and quality-related traits in wheat

(2021) Le Gao et al.   BMC PLANT BIOLOGY

A high-quality genome assembly highlights rye genomic characteristics and agronomically important genes

(2021) Guangwei Li et al.   NATURE GENETICS

Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential

(2021) M. Timothy Rabanus-Wallace et al.   NATURE GENETICS

Effects of increasing dietary rye levels on physicochemical characteristics of digesta and its impact on stomach emptying as well as the formation of ‘doughballs’ in stomachs of young pigs

(2021) Volker Wilke et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

Opportunities and limits of controlled-environment plant phenotyping for climate response traits

(2021) Anna Langstroff et al.   THEORETICAL AND APPLIED GENETICS

Large-scale integration of meta-QTL and genome-wide association study discovers the genomic regions and candidate genes for yield and yield-related traits in bread wheat

(2021) Yang Yang et al.   THEORETICAL AND APPLIED GENETICS

Genome‐wide association mapping and genomic prediction of Fusarium head blight resistance, heading stage and plant height in winter rye ( Secale cereale )

(2020) David Sewordor Gaikpa et al.   PLANT BREEDING

Breeder friendly phenotyping

(2020) Matthew Reynolds et al.   PLANT SCIENCE

Winter Wheat Yield Response to Plant Density as a Function of Yield Environment and Tillering Potential: A Review and Field Studies

(2020) Leonardo M. Bastos et al.   Frontiers in Plant Science

Genome wide screening and comparative genome analysis for Meta-QTLs, ortho-MQTLs and candidate genes controlling yield and yield-related traits in rice

(2020) Bahman Khahani et al.   BMC GENOMICS

Prospects of GWAS and predictive breeding for European winter wheat’s grain protein content, grain starch content, and grain hardness

(2020) Quddoos H. Muqaddasi et al.   Scientific Reports

Multi-Locus GWAS of Quality Traits in Bread Wheat: Mining More Candidate Genes and Possible Regulatory Network

(2020) Yang Yang et al.   Frontiers in Plant Science

Negative dominance and dominance-by-dominance epistatic effects reduce grain-yield heterosis in wide crosses in wheat

(2020) Philipp H. G. Boeven et al.   Science Advances

Impact of extreme weather conditions on European crop production in 2018

(2020) Damien Beillouin et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genetic structure of a germplasm for hybrid breeding in rye (Secale cereale L.)

(2020) Nikolaj M. Vendelbo et al.   PLoS One

Diversity analysis of 80,000 wheat accessions reveals consequences and opportunities of selection footprints

(2020) Carolina Sansaloni et al.   Nature Communications

Detection of genomic regions associated with tiller number in Iranian bread wheat under different water regimes using genome-wide association study

(2020) Sayedeh Saba Bilgrami et al.   Scientific Reports

Deep sampling and pooled amplicon sequencing reveals hidden genic variation in heterogeneous rye accessions

(2020) Anna Hawliczek et al.   BMC GENOMICS

The barley pan-genome reveals the hidden legacy of mutation breeding

(2020) Murukarthick Jayakodi et al.   NATURE

15 years of genome-wide association studies and no signs of slowing down

(2020) Ruth J. F. Loos   Nature Communications

Rye Bread Defects: Analysis of Composition and Further Influence Factors as Determinants of Dry-Baking

(2020) Marie Oest et al.   Foods

A haplotype-led approach to increase the precision of wheat breeding

(2020) Jemima Brinton et al.   Communications Biology

Assessing the genetic diversity and characterizing genomic regions conferring Tan Spot resistance in cultivated rye

(2019) Jagdeep Singh Sidhu et al.   PLoS One

Understanding the Molecular Bases of Agronomic Trait Improvement in Rice

(2019) Bing Wang et al.   PLANT CELL

Improving Genomic Selection With Quantitative Trait Loci and Nonadditive Effects Revealed by Empirical Evidence in Maize

(2019) Xiaogang Liu et al.   Frontiers in Plant Science

Gene Expression Profiling and Fine Mapping Identifies a Gibberellin 2-Oxidase Gene Co-segregating With the Dominant Dwarfing Gene Ddw1 in Rye (Secale cereale L.)

(2019) Eva-Maria Braun et al.   Frontiers in Plant Science

Reference Genome Anchoring of High-Density Markers for Association Mapping and Genomic Prediction in European Winter Wheat

(2019) Olufunmilayo Ladejobi et al.   Frontiers in Plant Science

GWAS: Fast-Forwarding Gene Identification in Temperate Cereals: Barley as a Case Study- A review

(2019) Ahmad M. Alqudah et al.   Journal of Advanced Research

Dynamic quantitative trait loci (QTL) for plant height predict biomass yield in hybrid rye ( Secale cereale L.)

(2018) Thomas Miedaner et al.   BIOMASS & BIOENERGY

Genetic diversity and relationship between domesticated rye and its wild relatives as revealed through genotyping-by-sequencing

(2018) Mona Schreiber et al.   Evolutionary Applications

Rice Functional Genomics Research: Past Decade and Future

(2018) Yan Li et al.   Molecular Plant

Effective BAC clone anchoring with genotyping-by-sequencing and Diversity Arrays Technology in a large genome cereal rye

(2018) Ewa Borzęcka et al.   Scientific Reports

Cereal yield gaps across Europe

(2018) René Schils et al.   EUROPEAN JOURNAL OF AGRONOMY

Genomic variation in 3,010 diverse accessions of Asian cultivated rice

(2018) Wensheng Wang et al.   NATURE

Combining high-throughput micro-CT-RGB phenotyping and genome-wide association study to dissect the genetic architecture of tiller growth in rice

(2018) Di Wu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genetics of barley tiller and leaf development

(2018) Salar Shaaf et al.   Journal of Integrative Plant Biology

Crop genome-wide association study: a harvest of biological relevance

(2018) Hai-Jun Liu et al.   PLANT JOURNAL

Enhancing genomic prediction with genome-wide association studies in multiparental maize populations

(2017) Y Bian et al.   HEREDITY

Genomic innovation for crop improvement

(2017) Michael W. Bevan et al.   NATURE

Correlated effects of exotic pollen-fertility restorer genes on agronomic and quality traits of hybrid rye

(2017) Thomas Miedaner et al.   PLANT BREEDING

A genome-wide association study of 23 agronomic traits in Chinese wheat landraces

(2017) Yaxi Liu et al.   PLANT JOURNAL

Towards a whole-genome sequence for rye (Secale cerealeL.)

(2017) Eva Bauer et al.   PLANT JOURNAL

Identification of Single Nucleotide Polymorphisms Associated with Brown Rust Resistance, α-Amylase Activity and Pre-harvest Sprouting in Rye (Secale cereale L.)

(2017) Monika Rakoczy-Trojanowska et al.   PLANT MOLECULAR BIOLOGY REPORTER

A Genome Wide Association Study of arabinoxylan content in 2-row spring barley grain

(2017) Ali Saleh Hassan et al.   PLoS One

Fine mapping of the restorer gene Rfp3 from an Iranian primitive rye (Secale cereale L.)

(2017) Bernd Hackauf et al.   THEORETICAL AND APPLIED GENETICS

QTL mapping and comparative genome analysis of agronomic traits including grain yield in winter rye

(2017) Bernd Hackauf et al.   THEORETICAL AND APPLIED GENETICS

Major genes determining yield-related traits in wheat and barley

(2017) Anna Nadolska-Orczyk et al.   THEORETICAL AND APPLIED GENETICS

Breeding progress, variation, and correlation of grain and quality traits in winter rye hybrid and population varieties and national on-farm progress in Germany over 26 years

(2017) Friedrich Laidig et al.   THEORETICAL AND APPLIED GENETICS

funRiceGenes dataset for comprehensive understanding and application of rice functional genes

(2017) Wen Yao et al.   GigaScience

Genome-wide association mapping in winter barley for grain yield and culm cell wall polymer content using the high-throughput CoMPP technique

(2017) Andrea Bellucci et al.   PLoS One

Geographical distribution of genetic diversity in Secale landrace and wild accessions

(2016) Jenny Hagenblad et al.   BMC PLANT BIOLOGY

Abiotic Stress Signaling and Responses in Plants

(2016) Jian-Kang Zhu   CELL

How do timing, duration, and intensity of drought stress affect the agronomic performance of winter rye?

(2016) Lorenz Kottmann et al.   EUROPEAN JOURNAL OF AGRONOMY

Controlling the Rate of GWAS False Discoveries

(2016) Damian Brzyski et al.   GENETICS

Genome-wide prediction models that incorporate de novo GWAS are a powerful new tool for tropical rice improvement

(2016) J E Spindel et al.   HEREDITY

The application of GBS markers for extending the dense genetic map of rye (Secale cereale L.) and the localization of the Rfc1 gene restoring male fertility in plants with the C source of sterility-inducing cytoplasm

(2016) Paweł Milczarski et al.   JOURNAL OF APPLIED GENETICS

Characterization of water and alkali extractable arabinoxylan from wheat and rye under standardized conditions

(2016) Krzysztof Buksa et al.   JOURNAL OF FOOD SCIENCE AND TECHNOLOGY-MYSORE

Global food security and nexus thinking

(2016) R. Lal   JOURNAL OF SOIL AND WATER CONSERVATION

Model training across multiple breeding cycles significantly improves genomic prediction accuracy in rye (Secale cereale L.)

(2016) Hans-Jürgen Auinger et al.   THEORETICAL AND APPLIED GENETICS

Rice: The First Crop Genome

(2016) Scott A. Jackson   Rice

Controlling the Rate of GWAS False Discoveries

(2016) Damian Brzyski et al.   GENETICS

The influence of arabinoxylans on the quality of grain industry products

(2015) Justyna Rosicka-Kaczmarek et al.   EUROPEAN FOOD RESEARCH AND TECHNOLOGY

Effect of suppression of arabinoxylan synthetic genes in wheat endosperm on chain length of arabinoxylan and extract viscosity

(2015) Jackie Freeman et al.   PLANT BIOTECHNOLOGY JOURNAL

Cell wall remodeling under abiotic stress

(2015) Raimund Tenhaken   Frontiers in Plant Science

Risk of false positive genetic associations in complex traits with underlying population structure: A case study

(2014) Carrie J. Finno et al.   VETERINARY JOURNAL

DWARF TILLER1, a WUSCHEL-Related Homeobox Transcription Factor, Is Required for Tiller Growth in Rice

(2014) Wenfei Wang et al.   PLoS Genetics

Natural Variations and Genome-Wide Association Studies in Crop Plants

(2013) Xuehui Huang et al.   Annual Review of Plant Biology

Effect of heat and drought stress on the structure and composition of arabinoxylan and β-glucan in wheat grain

(2013) Marianna Rakszegi et al.   CARBOHYDRATE POLYMERS

Performance of winter cereals grown on field-stored soil moisture only

(2013) Siegfried Schittenhelm et al.   EUROPEAN JOURNAL OF AGRONOMY

Hybrid breeding in wheat: technologies to improve hybrid wheat seed production

(2013) Ryan Whitford et al.   JOURNAL OF EXPERIMENTAL BOTANY

Single nucleotide polymorphism genotyping using Kompetitive Allele Specific PCR (KASP): overview of the technology and its application in crop improvement

(2013) Kassa Semagn et al.   MOLECULAR BREEDING

Reticulate Evolution of the Rye Genome

(2013) M. M. Martis et al.   PLANT CELL

Association between line per se and testcross performance for eight agronomic and quality traits in winter rye

(2013) Thomas Miedaner et al.   THEORETICAL AND APPLIED GENETICS

Genetic architecture of complex agronomic traits examined in two testcross populations of rye (Secale cereale L.)

(2012) Thomas Miedaner et al.   BMC GENOMICS

Genome-wide association studies for agronomical traits in a world wide spring barley collection

(2012) Raj K Pasam et al.   BMC PLANT BIOLOGY

Development of conserved ortholog set markers linked to the restorer gene Rfp1 in rye

(2012) Bernd Hackauf et al.   MOLECULAR BREEDING

Tackling Drought Stress: RECEPTOR-LIKE KINASES Present New Approaches

(2012) Alex Marshall et al.   PLANT CELL

Hybrid rye performance under natural drought stress in Europe

(2012) Marlen Hübner et al.   THEORETICAL AND APPLIED GENETICS

High levels of nucleotide diversity and fast decline of linkage disequilibrium in rye (Secale cereale L.) genes involved in frost response

(2011) Yongle Li et al.   BMC PLANT BIOLOGY

Identification of marker-trait associations in the German winter barley breeding gene pool (Hordeum vulgare L.)

(2011) Jeannette Rode et al.   MOLECULAR BREEDING

Speciation genes in plants

(2010) Loren H. Rieseberg et al.   ANNALS OF BOTANY

Genetic and Molecular Bases of Rice Yield

(2010) Yongzhong Xing et al.   Annual Review of Plant Biology

A Tutorial on Near Infrared Spectroscopy and Its Calibration

(2010) Lidia Esteve Agelet et al.   CRITICAL REVIEWS IN ANALYTICAL CHEMISTRY

The role of pentosans and starch in baking of wholemeal rye bread

(2010) Krzysztof Buksa et al.   FOOD RESEARCH INTERNATIONAL

Environment and Genotype Effects on the Content of Dietary Fiber and Its Components in Wheat in the HEALTHGRAIN Diversity Screen†

(2010) Kurt Gebruers et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Determining the plasmotypic structure of rye populations by SCAR markers

(2010) Stefan Stojałowski et al.   JOURNAL OF APPLIED GENETICS

Molecular basis of trait correlations

(2010) Yongsheng Chen et al.   TRENDS IN PLANT SCIENCE

Q-TARO: QTL Annotation Rice Online Database

(2010) Jun-ichi Yonemaru et al.   Rice

Simultaneous Genotype Calling and Haplotype Phasing Improves Genotype Accuracy and Reduces False-Positive Associations for Genome-wide Association Studies

(2009) Brian L. Browning et al.   AMERICAN JOURNAL OF HUMAN GENETICS

DArT markers for the rye genome - genetic diversity and mapping

(2009) Hanna Bolibok-Brągoszewska et al.   BMC GENOMICS

Content and Molecular-Weight Distribution of Dietary Fiber Components in Whole-Grain Rye Flour and Bread

(2009) Roger Andersson et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

The genetics of quantitative traits: challenges and prospects

(2009) Trudy F. C. Mackay et al.   NATURE REVIEWS GENETICS

Genetic variation of winter rye cultivars for their ergot (Claviceps purpurea) reaction tested in a field design with minimized interplot interference

(2009) T. Miedaner et al.   PLANT BREEDING

Barley β-glucans and arabinoxylans: Molecular structure, physicochemical properties, and uses in food products–a Review

(2008) M.S. Izydorczyk et al.   FOOD RESEARCH INTERNATIONAL

Comparative mapping of DNA sequences in rye (Secale cereale L.) in relation to the rice genome

(2008) B. Hackauf et al.   THEORETICAL AND APPLIED GENETICS