Improving Genomic Selection With Quantitative Trait Loci and Nonadditive Effects Revealed by Empirical Evidence in Maize
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Title
Improving Genomic Selection With Quantitative Trait Loci and Nonadditive Effects Revealed by Empirical Evidence in Maize
Authors
Keywords
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Journal
Frontiers in Plant Science
Volume 10, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2019-09-18
DOI
10.3389/fpls.2019.01129
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Note: Only part of the references are listed.- Factors Affecting the Accuracy of Genomic Selection for Agricultural Economic Traits in Maize, Cattle, and Pig Populations
- (2019) Haohao Zhang et al. Frontiers in Genetics
- Genome-Wide Association Mapping and Genomic Prediction Analyses Reveal the Genetic Architecture of Grain Yield and Flowering Time Under Drought and Heat Stress Conditions in Maize
- (2019) Yibing Yuan et al. Frontiers in Plant Science
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- (2019) J. Martin Sarinelli et al. THEORETICAL AND APPLIED GENETICS
- Bayesian analysis and prediction of hybrid performance
- (2019) Filipe Couto Alves et al. Plant Methods
- Genomic prediction of bull fertility in US Jersey dairy cattle
- (2019) Fernanda M. Rezende et al. JOURNAL OF DAIRY SCIENCE
- A new genomic prediction method with additive-dominance effects in the least-squares framework
- (2018) Hailan Liu et al. HEREDITY
- Improving accuracies of genomic predictions for drought tolerance in maize by joint modeling of additive and dominance effects in multi-environment trials
- (2018) Kaio Olímpio Das Graças Dias et al. HEREDITY
- Accuracy of genomic selection to predict maize single-crosses obtained through different mating designs
- (2018) Roberto Fristche-Neto et al. THEORETICAL AND APPLIED GENETICS
- Genomic selection of agronomic traits in hybrid rice using an NCII population
- (2018) Yang Xu et al. Rice
- Genome-Wide Association and Genomic Selection for Resistance to Amoebic Gill Disease in Atlantic Salmon
- (2018) Diego Robledo et al. G3-Genes Genomes Genetics
- Genomic Selection Outperforms Marker Assisted Selection for Grain Yield and Physiological Traits in a Maize Doubled Haploid Population Across Water Treatments
- (2018) Diego Cerrudo et al. Frontiers in Plant Science
- Non-additive Effects in Genomic Selection
- (2018) Luis Varona et al. Frontiers in Genetics
- Genome-Wide Association Studies for Dynamic Plant Height and Number of Nodes on the Main Stem in Summer Sowing Soybeans
- (2018) Fangguo Chang et al. Frontiers in Plant Science
- Genomic selection efficiency and a priori estimation of accuracy in a structured dent maize panel
- (2018) Simon Rio et al. THEORETICAL AND APPLIED GENETICS
- Small ad hoc versus large general training populations for genomewide selection in maize biparental crosses
- (2018) Sofía P. Brandariz et al. THEORETICAL AND APPLIED GENETICS
- Accuracy of within- and among-family genomic prediction for Fusarium head blight and Septoria tritici blotch in winter wheat
- (2018) Cathérine Pauline Herter et al. THEORETICAL AND APPLIED GENETICS
- Relevance of Additive and Nonadditive Genetic Relatedness for Genomic Prediction in Rice Population under Recurrent Selection Breeding
- (2017) Odilon P Morais JAAnior et al. GENETICS AND MOLECULAR RESEARCH
- Enhancing genomic prediction with genome-wide association studies in multiparental maize populations
- (2017) Y Bian et al. HEREDITY
- R Package ASMap: Efficient Genetic Linkage Map Construction and Diagnosis
- (2017) Julian Taylor et al. Journal of Statistical Software
- Development of a maize 55 K SNP array with improved genome coverage for molecular breeding
- (2017) Cheng Xu et al. MOLECULAR BREEDING
- Glossy15 Plays an Important Role in the Divergence of the Vegetative Transition between Maize and Its Progenitor, Teosinte
- (2017) Dingyi Xu et al. Molecular Plant
- Genomic prediction unifies animal and plant breeding programs to form platforms for biological discovery
- (2017) John M Hickey et al. NATURE GENETICS
- The genetic basis of plant architecture in 10 maize recombinant inbred line populations
- (2017) Qingchun Pan et al. PLANT PHYSIOLOGY
- High-Throughput Phenotyping and QTL Mapping Reveals the Genetic Architecture of Maize Plant Growth
- (2017) Xuehai Zhang et al. PLANT PHYSIOLOGY
- Genome-wide regression models considering general and specific combining ability predict hybrid performance in oilseed rape with similar accuracy regardless of trait architecture
- (2017) Christian R. Werner et al. THEORETICAL AND APPLIED GENETICS
- Genomic Selection in Plant Breeding: Methods, Models, and Perspectives
- (2017) José Crossa et al. TRENDS IN PLANT SCIENCE
- Rapid Cycling Genomic Selection in a Multiparental Tropical Maize Population
- (2017) Xuecai Zhang et al. G3-Genes Genomes Genetics
- Incomplete dominance of deleterious alleles contributes substantially to trait variation and heterosis in maize
- (2017) Jinliang Yang et al. PLoS Genetics
- Effect of Trait Heritability, Training Population Size and Marker Density on Genomic Prediction Accuracy Estimation in 22 bi-parental Tropical Maize Populations
- (2017) Ao Zhang et al. Frontiers in Plant Science
- Genetic dissection of maize plant architecture with an ultra-high density bin map based on recombinant inbred lines
- (2016) Zhiqiang Zhou et al. BMC GENOMICS
- Modeling Genotype × Environment Interaction for Genomic Selection with Unbalanced Data from a Wheat Breeding Program
- (2016) Bettina Lado et al. CROP SCIENCE
- Accuracy of Genomic Prediction in Synthetic Populations Depending on the Number of Parents, Relatedness, and Ancestral Linkage Disequilibrium
- (2016) Pascal Schopp et al. GENETICS
- Predicting rice hybrid performance using univariate and multivariate GBLUP models based on North Carolina mating design II
- (2016) X Wang et al. HEREDITY
- Genome-wide prediction models that incorporate de novo GWAS are a powerful new tool for tropical rice improvement
- (2016) J E Spindel et al. HEREDITY
- Improving production efficiency in the presence of genotype by environment interactions in pig genomic selection breeding programmes
- (2016) K.G. Nirea et al. JOURNAL OF ANIMAL BREEDING AND GENETICS
- Efficiency of genomic selection for tomato fruit quality
- (2016) Janejira Duangjit et al. MOLECULAR BREEDING
- Comparing genomic selection and marker-assisted selection for Fusarium head blight resistance in wheat (Triticum aestivum L.)
- (2016) M. P. Arruda et al. MOLECULAR BREEDING
- Genetic variation in ZmVPP1 contributes to drought tolerance in maize seedlings
- (2016) Xianglan Wang et al. NATURE GENETICS
- Metabolomic prediction of yield in hybrid rice
- (2016) Shizhong Xu et al. PLANT JOURNAL
- High accuracy of predicting hybrid performance of Fusarium head blight resistance by mid-parent values in wheat
- (2016) Thomas Miedaner et al. THEORETICAL AND APPLIED GENETICS
- Genetic architecture of male floral traits required for hybrid wheat breeding
- (2016) Philipp H. G. Boeven et al. THEORETICAL AND APPLIED GENETICS
- Accuracy of Genomic Prediction in Synthetic Populations Depending on the Number of Parents, Relatedness, and Ancestral Linkage Disequilibrium
- (2016) Pascal Schopp et al. GENETICS
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- (2015) Camila Ferreira Azevedo et al. BMC GENETICS
- Modeling Epistasis in Genomic Selection
- (2015) Yong Jiang et al. GENETICS
- Modeling additive and non-additive effects in a hybrid population using genome-wide genotyping: prediction accuracy implications
- (2015) J-M Bouvet et al. HEREDITY
- Genome-wide dissection of the maize ear genetic architecture using multiple populations
- (2015) Yingjie Xiao et al. NEW PHYTOLOGIST
- Genome-based establishment of a high-yielding heterotic pattern for hybrid wheat breeding
- (2015) Yusheng Zhao et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genomic analysis of hybrid rice varieties reveals numerous superior alleles that contribute to heterosis
- (2015) Xuehui Huang et al. Nature Communications
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- (2015) Zhe Zhang et al. G3-Genes Genomes Genetics
- Increased Prediction Accuracy in Wheat Breeding Trials Using a Marker × Environment Interaction Genomic Selection Model
- (2015) Marco Lopez-Cruz et al. G3-Genes Genomes Genetics
- Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Breeding Lines
- (2015) Jennifer Spindel et al. PLoS Genetics
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- (2015) Hanmei Liu et al. Frontiers in Plant Science
- Modeling Epistasis in Genomic Selection
- (2015) Yong Jiang et al. GENETICS
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- (2015) Ulrike Ober et al. PLoS One
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- (2014) Jason A. Peiffer et al. GENETICS
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- (2014) Patricio R. Muñoz et al. GENETICS
- Genome-Wide Regression and Prediction with the BGLR Statistical Package
- (2014) P. Perez et al. GENETICS
- Comparison of genomic predictions using genomic relationship matrices built with different weighting factors to account for locus-specific variances
- (2014) G. Su et al. JOURNAL OF DAIRY SCIENCE
- Improving the Accuracy of Whole Genome Prediction for Complex Traits Using the Results of Genome Wide Association Studies
- (2014) Zhe Zhang et al. PLoS One
- Mixed Model Methods for Genomic Prediction and Variance Component Estimation of Additive and Dominance Effects Using SNP Markers
- (2014) Yang Da et al. PLoS One
- Predicting hybrid performance in rice using genomic best linear unbiased prediction
- (2014) S. Xu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The impact of population structure on genomic prediction in stratified populations
- (2014) Zhigang Guo et al. THEORETICAL AND APPLIED GENETICS
- Training set optimization under population structure in genomic selection
- (2014) Julio Isidro et al. THEORETICAL AND APPLIED GENETICS
- Genomic selection: genome-wide prediction in plant improvement
- (2014) Zeratsion Abera Desta et al. TRENDS IN PLANT SCIENCE
- Genomewide Selection when Major Genes Are Known
- (2013) Rex Bernardo CROP SCIENCE
- Genome-wide association studies and prediction of 17 traits related to phenology, biomass and cell wall composition in the energy grassMiscanthus sinensis
- (2013) Gancho T. Slavov et al. NEW PHYTOLOGIST
- Does genomic selection have a future in plant breeding?
- (2013) Elisabeth Jonas et al. TRENDS IN BIOTECHNOLOGY
- Genomic Prediction of Northern Corn Leaf Blight Resistance in Maize with Combined or Separated Training Sets for Heterotic Groups
- (2013) Frank Technow et al. G3-Genes Genomes Genetics
- GAPIT: genome association and prediction integrated tool
- (2012) Alexander E. Lipka et al. BIOINFORMATICS
- Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels
- (2012) Hui Li et al. NATURE GENETICS
- Brd1 Gene in Maize Encodes a Brassinosteroid C-6 Oxidase
- (2012) Irina Makarevitch et al. PLoS One
- Estimating Additive and Non-Additive Genetic Variances and Predicting Genetic Merits Using Genome-Wide Dense Single Nucleotide Polymorphism Markers
- (2012) Guosheng Su et al. PLoS One
- Extension of the bayesian alphabet for genomic selection
- (2011) David Habier et al. BMC BIOINFORMATICS
- Ridge Regression and Other Kernels for Genomic Selection with R Package rrBLUP
- (2011) Jeffrey B. Endelman Plant Genome
- R/qtl: high-throughput multiple QTL mapping: Fig. 1.
- (2010) Danny Arends et al. BIOINFORMATICS
- Genome-wide association studies of 14 agronomic traits in rice landraces
- (2010) Xuehui Huang et al. NATURE GENETICS
- High-throughput genotyping by whole-genome resequencing
- (2009) X. Huang et al. GENOME RESEARCH
- Genomic selection in admixed and crossbred populations 1
- (2009) A. Toosi et al. JOURNAL OF ANIMAL SCIENCE
- Efficient Methods to Compute Genomic Predictions
- (2008) P.M. VanRaden JOURNAL OF DAIRY SCIENCE
- Trends in genetic variance components during 30 years of hybrid maize breeding at the University of Hohenheim
- (2008) S. Fischer et al. PLANT BREEDING
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