BSA‑seq and genetic mapping reveals AhRt2 as a candidate gene responsible for red testa of peanut

Fine Mapping of the “black” Peel Color in Pomegranate (Punica granatum L.) Strongly Suggests That a Mutation in the Anthocyanidin Reductase (ANR) Gene Is Responsible for the Trait

(2021) Taly Trainin et al.   Frontiers in Plant Science

Fine-mapping and gene candidate analysis for AhRt1, a major dominant locus responsible for testa color in cultivated peanut

(2021) Hao Chen et al.   THEORETICAL AND APPLIED GENETICS

Genetic diversity analysis of Korean peanut germplasm using 48 K SNPs ‘Axiom_Arachis’ Array and its application for cultivar differentiation

(2021) Rizwana Begum Syed Nabi et al.   Scientific Reports

Transcriptome and Metabolome Analysis Unveil Anthocyanin Metabolism in Pink and Red Testa of Peanut (Arachis hypogaea L.)

(2021) Qiqin Xue et al.   International Journal of Genomics

Genome-wide development of polymorphic microsatellite markers and their application in peanut breeding program

(2020) Junjie Ma et al.   ELECTRONIC JOURNAL OF BIOTECHNOLOGY

Mulberry genes MnANR and MnLAR confer transgenic plants with resistance to Botrytis cinerea

(2020) Youchao Xin et al.   PLANT SCIENCE

Identification of a Major QTL and Candidate Gene Analysis of Salt Tolerance at the Bud Burst Stage in Rice (Oryza sativa L.) Using QTL-Seq and RNA-Seq

(2020) Lei Lei et al.   Rice

Sequencing of cultivated peanut, Arachis hypogaea, yields insights into genome evolution and oil improvement

(2019) Xiaoping Chen et al.   Molecular Plant

The genome sequence of segmental allotetraploid peanut Arachis hypogaea

(2019) David J. Bertioli et al.   NATURE GENETICS

The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication

(2019) Weijian Zhuang et al.   NATURE GENETICS

Whole‐genome resequencing‐based QTL ‐seq identified AhTc1 gene encoding a R2R3‐ MYB transcription factor controlling peanut purple testa color

(2019) Yuhan Zhao et al.   PLANT BIOTECHNOLOGY JOURNAL

Genome‐wide expression quantitative trait locus analysis in a recombinant inbred line population for trait dissection in peanut

(2019) Li Huang et al.   PLANT BIOTECHNOLOGY JOURNAL

Black rice (Oryza sativa L.): A review of its historical aspects, chemical composition, nutritional and functional properties, and applications and processing technologies

(2019) Vivian Cristina Ito et al.   FOOD CHEMISTRY

High-density genetic map using whole-genome resequencing for fine mapping and candidate gene discovery for disease resistance in peanut

(2018) Gaurav Agarwal et al.   PLANT BIOTECHNOLOGY JOURNAL

Haplotype-Based Genotyping in Polyploids

(2018) Josh P. Clevenger et al.   Frontiers in Plant Science

Mapping Late Leaf Spot Resistance in Peanut (Arachis hypogaea) Using QTL-seq Reveals Markers for Marker-Assisted Selection

(2018) Josh Clevenger et al.   Frontiers in Plant Science

A SNP-Based Linkage Map Revealed QTLs for Resistance to Early and Late Leaf Spot Diseases in Peanut (Arachis hypogaea L.)

(2018) Suoyi Han et al.   Frontiers in Plant Science

Genome of an allotetraploid wild peanut Arachis monticola: a de novo assembly

(2018) Dongmei Yin et al.   GigaScience

Discovery of genomic regions and candidate genes controlling shelling percentage using QTL ‐seq approach in cultivated peanut ( Arachis hypogaea L.)

(2018) Huaiyong Luo et al.   PLANT BIOTECHNOLOGY JOURNAL

Bioactive compound and antioxidant activity distribution in roller-milled and pearled fractions of conventional and pigmented wheat varieties

(2017) Debora Giordano et al.   FOOD CHEMISTRY

Genome-wide SNP Genotyping Resolves Signatures of Selection and Tetrasomic Recombination in Peanut

(2017) Josh Clevenger et al.   Molecular Plant

QTL-seq approach identified genomic regions and diagnostic markers for rust and late leaf spot resistance in groundnut (Arachis hypogaea L.)

(2017) Manish K. Pandey et al.   PLANT BIOTECHNOLOGY JOURNAL

Genome-Wide Discovery of Microsatellite Markers from Diploid Progenitor Species, Arachis duranensis and A. ipaensis, and Their Application in Cultivated Peanut (A. hypogaea)

(2017) Chuanzhi Zhao et al.   Frontiers in Plant Science

Genome-Wide Analysis of Gene Expression Provides New Insights into Cold Responses in Thellungiella salsuginea

(2017) Jiangshan Wang et al.   Frontiers in Plant Science

Rapid cloning of disease-resistance genes in plants using mutagenesis and sequence capture

(2016) Burkhard Steuernagel et al.   NATURE BIOTECHNOLOGY

The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut

(2016) David John Bertioli et al.   NATURE GENETICS

MMAPPR: Mutation Mapping Analysis Pipeline for Pooled RNA-seq

(2013) J. T. Hill et al.   GENOME RESEARCH

Premature and ectopic anthocyanin formation by silencing of anthocyanidin reductase in strawberry (Fragaria × ananassa)

(2013) Thilo C. Fischer et al.   NEW PHYTOLOGIST

QTL-seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations

(2013) Hiroki Takagi et al.   PLANT JOURNAL

Transgenic Tobacco Overexpressing Tea cDNA Encoding Dihydroflavonol 4-Reductase and Anthocyanidin Reductase Induces Early Flowering and Provides Biotic Stress Tolerance

(2013) Vinay Kumar et al.   PLoS One

MutMap+: Genetic Mapping and Mutant Identification without Crossing in Rice

(2013) Rym Fekih et al.   PLoS One

Genome sequencing reveals agronomically important loci in rice using MutMap

(2012) Akira Abe et al.   NATURE BIOTECHNOLOGY

Advances in Arachis genomics for peanut improvement

(2011) Manish K. Pandey et al.   BIOTECHNOLOGY ADVANCES

Identification of Two Anthocyanidin Reductase Genes and Three Red-Brown Soybean Accessions with Reduced Anthocyanidin Reductase 1 mRNA, Activity, and Seed Coat Proanthocyanidin Amounts

(2011) Nik Kovinich et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Potential use of peanut by-products in food processing: a review

(2011) Xiaoyan Zhao et al.   JOURNAL OF FOOD SCIENCE AND TECHNOLOGY-MYSORE

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS