Highly efficient genome editing in Xanthomonas oryzae pv.  oryzae through repurposing the endogenous type I‐C CRISPR‐Cas system

Genome Editing in Bacteria: CRISPR-Cas and Beyond

(2021) Ruben D. Arroyo-Olarte et al.   Microorganisms

A transferrable and integrative type I-F Cascade for heterologous genome editing and transcription modulation

(2021) Zeling Xu et al.   NUCLEIC ACIDS RESEARCH

Cas3/I-C mediated target DNA recognition and cleavage during CRISPR interference are independent of the composition and architecture of Cascade surveillance complex

(2020) Siddharth Nimkar et al.   NUCLEIC ACIDS RESEARCH

Resistance Genes and their Interactions with Bacterial Blight/Leaf Streak Pathogens (Xanthomonas oryzae) in Rice (Oryza sativa L.)—an Updated Review

(2020) Nan Jiang et al.   Rice

Genome editing with CRISPR–Cas nucleases, base editors, transposases and prime editors

(2020) Andrew V. Anzalone et al.   NATURE BIOTECHNOLOGY

Advances in the Xoo-rice pathosystem interaction and its exploitation in disease management

(2020) Johnson Beslin Joshi et al.   JOURNAL OF BIOSCIENCES

Bacterial CRISPR screens for gene function

(2020) Horia Todor et al.   CURRENT OPINION IN MICROBIOLOGY

The global burden of pathogens and pests on major food crops

(2019) Serge Savary et al.   Nature Ecology & Evolution

Introducing a Spectrum of Long-Range Genomic Deletions in Human Embryonic Stem Cells Using Type I CRISPR-Cas

(2019) Adam E. Dolan et al.   MOLECULAR CELL

Barriers to genome editing with CRISPR in bacteria

(2019) Justin M. Vento et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Using an Endogenous CRISPR-Cas System for Genome Editing in the Human Pathogen Clostridium difficile

(2019) Anna Maikova et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Using the Endogenous CRISPR-Cas System of Heliobacterium modesticaldum To Delete the Photochemical Reaction Center Core Subunit Gene

(2019) Patricia L. Baker et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization and repurposing of the endogenous Type I-F CRISPR–Cas system of Zymomonas mobilis for genome engineering

(2019) Yanli Zheng et al.   NUCLEIC ACIDS RESEARCH

Native CRISPR-Cas-Mediated Genome Editing Enables Dissecting and Sensitizing Clinical Multidrug-Resistant P. aeruginosa

(2019) Zeling Xu et al.   Cell Reports

Genome editing and transcriptional repression in Pseudomonas putida KT2440 via the type II CRISPR system

(2018) Jun Sun et al.   Microbial Cell Factories

Multiplexed CRISPR-Cpf1-Mediated Genome Editing in Clostridium difficile toward the Understanding of Pathogenesis of C. difficile Infection

(2018) Wei Hong et al.   ACS Synthetic Biology

Post-invasive Bacterial Resistance Conferred by Open Stomata in Rice

(2018) Dandan Zhang et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Harnessing the native type I-B CRISPR-Cas for genome editing in a polyploid archaeon

(2017) Feiyue Cheng et al.   Journal of Genetics and Genomics

Active and adaptiveLegionellaCRISPR-Cas reveals a recurrent challenge to the pathogen

(2016) Chitong Rao et al.   CELLULAR MICROBIOLOGY

Gene Repression in Haloarchaea Using the CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats)-Cas I-B System

(2016) Aris-Edda Stachler et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

DNA Targeting by a Minimal CRISPR RNA-Guided Cascade

(2016) Megan L. Hochstrasser et al.   MOLECULAR CELL

Identifying and Visualizing Functional PAM Diversity across CRISPR-Cas Systems

(2016) Ryan T. Leenay et al.   MOLECULAR CELL

Harnessing heterologous and endogenous CRISPR-Cas machineries for efficient markerless genome editing in Clostridium

(2016) Michael E. Pyne et al.   Scientific Reports

Multigene Editing in the Escherichia coli Genome via the CRISPR-Cas9 System

(2015) Yu Jiang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Role of DetR in defence is critical for virulence of X anthomonas oryzae pv. oryzae

(2015) Minh-Phuong Nguyen et al.   MOLECULAR PLANT PATHOLOGY

Precision-engineering the Pseudomonas aeruginosa genome with two-step allelic exchange

(2015) Laura R Hmelo et al.   Nature Protocols

An updated evolutionary classification of CRISPR–Cas systems

(2015) Kira S. Makarova et al.   NATURE REVIEWS MICROBIOLOGY

Harnessing Type I and Type III CRISPR-Cas systems for genome editing

(2015) Yingjun Li et al.   NUCLEIC ACIDS RESEARCH

Novel Insights into Rice Innate Immunity Against Bacterial and Fungal Pathogens

(2014) Wende Liu et al.   Annual Review of Phytopathology

Repurposing endogenous type I CRISPR-Cas systems for programmable gene repression

(2014) Michelle L. Luo et al.   NUCLEIC ACIDS RESEARCH

In vitro reconstitution of Cascade-mediated CRISPR immunity in Streptococcus thermophilus

(2013) Tomas Sinkunas et al.   EMBO JOURNAL

In VitroReconstitution of anEscherichia coliRNA-guided Immune System Reveals Unidirectional, ATP-dependent Degradation of DNA Target

(2013) Sabin Mulepati et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

RNA-guided editing of bacterial genomes using CRISPR-Cas systems

(2013) Wenyan Jiang et al.   NATURE BIOTECHNOLOGY

CRISPRTarget

(2013) Ambarish Biswas et al.   RNA Biology

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

The diffusible factor synthase XanB2 is a bifunctional chorismatase that links the shikimate pathway to ubiquinone and xanthomonadins biosynthetic pathways

(2012) Lian Zhou et al.   MOLECULAR MICROBIOLOGY

Top 10 plant pathogenic bacteria in molecular plant pathology

(2012) JOHN MANSFIELD et al.   MOLECULAR PLANT PATHOLOGY

Cas5d Protein Processes Pre-crRNA and Assembles into a Cascade-like Interference Complex in Subtype I-C/Dvulg CRISPR-Cas System

(2012) Ki Hyun Nam et al.   STRUCTURE

A Non-Marker Mutagenesis Strategy to Generate Poly-hrp Gene Mutants in the Rice Pathogen Xanthomonas oryzae pv. oryzicola

(2011) Li-fang ZOU et al.   Agricultural Sciences in China

Cas3 is a single-stranded DNA nuclease and ATP-dependent helicase in the CRISPR/Cas immune system

(2011) Tomas Sinkunas et al.   EMBO JOURNAL

Controlling rice bacterial blight in Africa: Needs and prospects

(2011) Valérie Verdier et al.   JOURNAL OF BIOTECHNOLOGY

Innate immunity in rice

(2011) Xuewei Chen et al.   TRENDS IN PLANT SCIENCE

Short motif sequences determine the targets of the prokaryotic CRISPR defence system

(2009)   MICROBIOLOGY-SGM

Mutational analysis of the gum gene cluster required for xanthan biosynthesis in Xanthomonas oryzae pv oryzae

(2008) Sang-Yoon Kim et al.   BIOTECHNOLOGY LETTERS

Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A

(2008) Steven L Salzberg et al.   BMC GENOMICS

Genome-wide identification of pathogenicity genes inXanthomonas oryzaepv.oryzaeby transposon mutagenesis

(2008) J. C. Wang et al.   PLANT PATHOLOGY