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Title
Barriers to genome editing with CRISPR in bacteria
Authors
Keywords
Bacteria, Nuclease, Genome editing, CRISPR, Recombineering
Journal
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2019-06-05
DOI
10.1007/s10295-019-02195-1
References
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Note: Only part of the references are listed.- An engineered E. coli Nissle improves hyperammonemia and survival in mice and shows dose-dependent exposure in healthy humans
- (2019) Caroline B. Kurtz et al. Science Translational Medicine
- Accelerated genome engineering of Pseudomonas putida by I-Sce I―mediated recombination and CRISPR-Cas9 counterselection
- (2019) Nicolas T. Wirth et al. Microbial Biotechnology
- Optimizing a CRISPR-Cpf1-based genome engineering system for Corynebacterium glutamicum
- (2019) Jiao Zhang et al. Microbial Cell Factories
- A rapid and versatile tool for genomic engineering in Lactococcus lactis
- (2019) Tingting Guo et al. Microbial Cell Factories
- Application of CRISPR-Cas12a temperature sensitivity for improved genome editing in rice, maize, and Arabidopsis
- (2019) Aimee A. Malzahn et al. BMC BIOLOGY
- CRISPR-Cas9D10A nickase-assisted base editing in the solvent producer Clostridium beijerinckii
- (2019) Qi Li et al. BIOTECHNOLOGY AND BIOENGINEERING
- Development of a CRISPR/Cas9 system for Methylococcus capsulatus in vivo gene editing
- (2019) Timothy Tapscott et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Combination of ssDNA recombineering and CRISPR-Cas9 for Pseudomonas putida KT2440 genome editing
- (2019) Zhixin Wu et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Development of a RecE/T‐Assisted CRISPR–Cas9 Toolbox for Lactobacillus
- (2019) He Huang et al. Biotechnology Journal
- Application of long single-stranded DNA donors in genome editing: generation and validation of mouse mutants
- (2018) Gemma F. Codner et al. BMC BIOLOGY
- Genome engineering of Clostridium difficile using the CRISPR-Cas9 system
- (2018) S. Wang et al. CLINICAL MICROBIOLOGY AND INFECTION
- CRISPR Mediated Genome Engineering and its Application in Industry
- (2018) Saeed Kaboli et al. CURRENT ISSUES IN MOLECULAR BIOLOGY
- Exploiting endogenous CRISPR-Cas system for multiplex genome editing in Clostridium tyrobutyricum and engineer the strain for high-level butanol production
- (2018) Jie Zhang et al. METABOLIC ENGINEERING
- Genome editing and transcriptional repression in Pseudomonas putida KT2440 via the type II CRISPR system
- (2018) Jun Sun et al. Microbial Cell Factories
- Rapid and Scalable Characterization of CRISPR Technologies Using an E. coli Cell-Free Transcription-Translation System
- (2018) Ryan Marshall et al. MOLECULAR CELL
- Advances in Industrial Biotechnology Using CRISPR-Cas Systems
- (2018) Paul D. Donohoue et al. TRENDS IN BIOTECHNOLOGY
- Efficient and Scalable Precision Genome Editing in Staphylococcus aureus through Conditional Recombineering and CRISPR/Cas9-Mediated Counterselection
- (2018) Kelsi Penewit et al. mBio
- A CRISPRi screen in E. coli reveals sequence-specific toxicity of dCas9
- (2018) Lun Cui et al. Nature Communications
- High-Level dCas9 Expression Induces Abnormal Cell Morphology in Escherichia coli
- (2018) Suhyung Cho et al. ACS Synthetic Biology
- Multiplexed CRISPR-Cpf1-Mediated Genome Editing in Clostridium difficile toward the Understanding of Pathogenesis of C. difficile Infection
- (2018) Wei Hong et al. ACS Synthetic Biology
- Deaminase-mediated multiplex genome editing in Escherichia coli
- (2018) Satomi Banno et al. Nature Microbiology
- Versatile Cas9-Driven Subpopulation Selection Toolbox for Lactococcus lactis
- (2018) Simon van der Els et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- CRISPR-Cpf1-Assisted Multiplex Genome Editing and Transcriptional Repression in Streptomyces
- (2018) Lei Li et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Precise and efficient genome editing in Klebsiella pneumoniae using CRISPR-Cas9 and CRISPR-assisted cytidine deaminase
- (2018) Yu Wang et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- A CRISPR-Cpf1-Assisted Non-Homologous End Joining Genome Editing System of Mycobacterium smegmatis
- (2018) Bingbing Sun et al. Biotechnology Journal
- Genome Editing with CRISPR-Cas9 in Lactobacillus plantarum Revealed That Editing Outcomes Can Vary Across Strains and Between Methods
- (2018) Ryan T. Leenay et al. Biotechnology Journal
- Characterization and Repurposing of Type I and Type II CRISPR-Cas Systems in Bacteria
- (2018) Claudio Hidalgo-Cantabrana et al. JOURNAL OF MOLECULAR BIOLOGY
- Evolved Cas9 variants with broad PAM compatibility and high DNA specificity
- (2018) Johnny H. Hu et al. NATURE
- Functionally diverse type V CRISPR-Cas systems
- (2018) Winston X. Yan et al. SCIENCE
- Repurposing CRISPR-Cas12b for mammalian genome engineering
- (2018) Fei Teng et al. Cell Discovery
- A two-plasmid inducible CRISPR/Cas9 genome editing tool for Clostridium acetobutylicum
- (2017) François Wasels et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Deciphering, Communicating, and Engineering the CRISPR PAM
- (2017) Ryan T. Leenay et al. JOURNAL OF MOLECULAR BIOLOGY
- Rapid and Efficient Genome Editing in Staphylococcus aureus by Using an Engineered CRISPR/Cas9 System
- (2017) Weizhong Chen et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- CRISPR EnAbled Trackable genome Engineering for isopropanol production in Escherichia coli
- (2017) Liya Liang et al. METABOLIC ENGINEERING
- Large scale validation of an efficient CRISPR/Cas-based multi gene editing protocol in Escherichia coli
- (2017) Francesca Zerbini et al. Microbial Cell Factories
- High tolerance to self-targeting of the genome by the endogenous CRISPR-Cas system in an archaeon
- (2017) Aris-Edda Stachler et al. NUCLEIC ACIDS RESEARCH
- CRISPR-Cpf1 assisted genome editing of Corynebacterium glutamicum
- (2017) Yu Jiang et al. Nature Communications
- Managing the SOS Response for Enhanced CRISPR-Cas-Based Recombineering in E. coli through Transient Inhibition of Host RecA Activity
- (2017) Eirik Adim Moreb et al. ACS Synthetic Biology
- Efficient Genome Editing of a Facultative Thermophile Using Mesophilic spCas9
- (2017) Ioannis Mougiakos et al. ACS Synthetic Biology
- CRISPR/Cas9-Based Counterselection Boosts Recombineering Efficiency in Pseudomonas putida
- (2017) Tomás Aparicio et al. Biotechnology Journal
- A Highly Efficient CRISPR-Cas9-Mediated Large Genomic Deletion in Bacillus subtilis
- (2017) Younju So et al. Frontiers in Microbiology
- Programmable transcriptional repression in mycobacteria using an orthogonal CRISPR interference platform
- (2017) Jeremy M. Rock et al. Nature Microbiology
- Using CRISPR-Cas9-mediated genome editing to generate C. difficile mutants defective in selenoproteins synthesis
- (2017) Kathleen N. McAllister et al. Scientific Reports
- Editing of the Bacillus subtilis Genome by the CRISPR-Cas9 System
- (2016) Josef Altenbuchner APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- CRISPR-based genome editing and expression control systems inClostridium acetobutylicumandClostridium beijerinckii
- (2016) Qi Li et al. Biotechnology Journal
- Gene Repression in Haloarchaea Using the CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats)-Cas I-B System
- (2016) Aris-Edda Stachler et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- CRISPR-Cas9 for the genome engineering of cyanobacteria and succinate production
- (2016) Hung Li et al. METABOLIC ENGINEERING
- Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage
- (2016) Alexis C. Komor et al. NATURE
- High-fidelity CRISPR–Cas9 nucleases with no detectable genome-wide off-target effects
- (2016) Benjamin P. Kleinstiver et al. NATURE
- C-terminal region of bacterial Ku controls DNA bridging, DNA threading and recruitment of DNA ligase D for double strand breaks repair
- (2016) Stephen McGovern et al. NUCLEIC ACIDS RESEARCH
- Consequences of Cas9 cleavage in the chromosome ofEscherichia coli
- (2016) Lun Cui et al. NUCLEIC ACIDS RESEARCH
- Rapid and Efficient One-Step Metabolic Pathway Integration in E. coli
- (2016) Marcelo C. Bassalo et al. ACS Synthetic Biology
- CRISPR/Cas9-Based Efficient Genome Editing in Clostridium ljungdahlii, an Autotrophic Gas-Fermenting Bacterium
- (2016) He Huang et al. ACS Synthetic Biology
- CRISPR-based genome editing and expression control systems inClostridium acetobutylicumandClostridium beijerinckii
- (2016) Qi Li et al. Biotechnology Journal
- CRMAGE: CRISPR Optimized MAGE Recombineering
- (2016) Carlotta Ronda et al. Scientific Reports
- Harnessing heterologous and endogenous CRISPR-Cas machineries for efficient markerless genome editing in Clostridium
- (2016) Michael E. Pyne et al. Scientific Reports
- One-step high-efficiency CRISPR/Cas9-mediated genome editing in Streptomyces
- (2015) He Huang et al. ACTA BIOCHIMICA ET BIOPHYSICA SINICA
- Efficient Genome Editing in Clostridium cellulolyticum via CRISPR-Cas9 Nickase
- (2015) Tao Xu et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Multigene Editing in the Escherichia coli Genome via the CRISPR-Cas9 System
- (2015) Yu Jiang et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Cpf1 Is a Single RNA-Guided Endonuclease of a Class 2 CRISPR-Cas System
- (2015) Bernd Zetsche et al. CELL
- Metabolic engineering of Escherichia coli using CRISPR–Cas9 meditated genome editing
- (2015) Yifan Li et al. METABOLIC ENGINEERING
- A light-inducible CRISPR-Cas9 system for control of endogenous gene activation
- (2015) Lauren R Polstein et al. Nature Chemical Biology
- CRISPR-based screening of genomic island excision events in bacteria
- (2015) Kurt Selle et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Harnessing CRISPR–Cas systems for bacterial genome editing
- (2015) Kurt Selle et al. TRENDS IN MICROBIOLOGY
- The no-SCAR (Scarless Cas9 Assisted Recombineering) system for genome editing in Escherichia coli
- (2015) Chris R. Reisch et al. Scientific Reports
- CRISPR-Cas9 Based Engineering of Actinomycetal Genomes
- (2015) Yaojun Tong et al. ACS Synthetic Biology
- Targeted Large-Scale Deletion of Bacterial Genomes Using CRISPR-Nickases
- (2015) Kylie Standage-Beier et al. ACS Synthetic Biology
- Repurposing endogenous type I CRISPR-Cas systems for programmable gene repression
- (2014) Michelle L. Luo et al. NUCLEIC ACIDS RESEARCH
- CRISPR–Cas9-assisted recombineering in Lactobacillus reuteri
- (2014) Jee-Hwan Oh et al. NUCLEIC ACIDS RESEARCH
- Programmable Removal of Bacterial Strains by Use of Genome-Targeting CRISPR-Cas Systems
- (2014) A. A. Gomaa et al. mBio
- High-Efficiency Multiplex Genome Editing of Streptomyces Species Using an Engineered CRISPR/Cas System
- (2014) Ryan E. Cobb et al. ACS Synthetic Biology
- RNA-guided editing of bacterial genomes using CRISPR-Cas systems
- (2013) Wenyan Jiang et al. NATURE BIOTECHNOLOGY
- Positive and negative selection using the tetA-sacB cassette: recombineering and P1 transduction in Escherichia coli
- (2013) Xin-tian Li et al. NUCLEIC ACIDS RESEARCH
- Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice
- (2013) Wenzhi Jiang et al. NUCLEIC ACIDS RESEARCH
- Genome engineering in Saccharomyces cerevisiae using CRISPR-Cas systems
- (2013) James E. DiCarlo et al. NUCLEIC ACIDS RESEARCH
- RNA-Guided Human Genome Engineering via Cas9
- (2013) P. Mali et al. SCIENCE
- Cytotoxic Chromosomal Targeting by CRISPR/Cas Systems Can Reshape Bacterial Genomes and Expel or Remodel Pathogenicity Islands
- (2013) Reuben B. Vercoe et al. PLoS Genetics
- An Archaeal Immune System Can Detect Multiple Protospacer Adjacent Motifs (PAMs) to Target Invader DNA
- (2012) Susan Fischer et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria
- (2012) G. Gasiunas et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity
- (2012) M. Jinek et al. SCIENCE
- CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
- (2011) Elitza Deltcheva et al. NATURE
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