Early-life gut microbiota and its connection to metabolic health in children: Perspective on ecological drivers and need for quantitative approach

Metagenomic insights of the infant microbiome community structure and function across multiple sites in the United States

(2021) Giorgio Casaburi et al.   Scientific Reports

A philosophical perspective on the prenatal in utero microbiome debate

(2021) Jens Walter et al.   Microbiome

Maternal consumption of artificially sweetened beverages during pregnancy is associated with infant gut microbiota and metabolic modifications and increased infant body mass index

(2021) Isabelle Laforest-Lapointe et al.   Gut Microbes

Multi-kingdom ecological drivers of microbiota assembly in preterm infants

(2021) Chitong Rao et al.   NATURE

Gut microbiota comparison of vaginally and cesarean born infants exclusively breastfed by mothers secreting α1–2 fucosylated oligosaccharides in breast milk

(2021) Karina M. Tonon et al.   PLoS One

Neonatal antibiotic exposure impairs child growth during the first six years of life by perturbing intestinal microbial colonization

(2021) Atara Uzan-Yulzari et al.   Nature Communications

Strain inheritance and neonatal gut microbiota development: A meta-analysis

(2021) Daniel Podlesny et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Associations between human milk oligosaccharides and growth in infancy and early childhood

(2020) Hanna Lagström et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Microbiome Composition in Pediatric Populations from Birth to Adolescence: Impact of Diet and Prebiotic and Probiotic Interventions

(2020) Erin C. Davis et al.   DIGESTIVE DISEASES AND SCIENCES

Antibiotics in early life associate with specific gut microbiota signatures in a prospective longitudinal infant cohort

(2020) Katri Korpela et al.   PEDIATRIC RESEARCH

Quantitative PCR provides a simple and accessible method for quantitative microbiota profiling

(2020) Ching Jian et al.   PLoS One

Maternal gut microbiota in pregnancy influences offspring metabolic phenotype in mice

(2020) Ikuo Kimura et al.   SCIENCE

Overweight and Obesity in Children Are Associated with an Abundance of Firmicutes and Reduction of Bifidobacterium in Their Gastrointestinal Microbiota

(2020) Cerano C. Da Silva et al.   Childhood Obesity

Timing of complementary feeding is associated with gut microbiota diversity and composition and short chain fatty acid concentrations over the first year of life

(2020) Moira K. Differding et al.   BMC MICROBIOLOGY

Impact of short-term overfeeding of saturated or unsaturated fat or sugars on the gut microbiota in relation to liver fat in obese and overweight adults

(2020) Ching Jian et al.   CLINICAL NUTRITION

Intestinal Enterococcus abundance correlates inversely with excessive weight gain and increased plasma leptin in breastfed infants

(2020) Martin Frederik Laursen et al.   FEMS MICROBIOLOGY ECOLOGY

The influence of prenatal and intrapartum antibiotics on intestinal microbiota colonisation in infants: A systematic review

(2020) T.H. Dierikx et al.   JOURNAL OF INFECTION

A dysregulated bile acid-gut microbiota axis contributes to obesity susceptibility

(2020) Meilin Wei et al.   EBioMedicine

Distinct maternal microbiota clusters are associated with diet during pregnancy: impact on neonatal microbiota and infant growth during the first 18 months of life

(2020) Izaskun García-Mantrana et al.   Gut Microbes

The impact of Caesarean section on the infant gut microbiome

(2020) Delphine M. Hoang et al.   ACTA PAEDIATRICA

The effect of ultra-processed very low-energy diets on gut microbiota and metabolic outcomes in individuals with obesity: A systematic literature review

(2020) Melissa Lane et al.   Obesity Research & Clinical Practice

Bile acids drive the newborn’s gut microbiota maturation

(2020) N. van Best et al.   Nature Communications

Microbiome of the first stool and overweight at age 3 years: A prospective cohort study

(2020) Katja Korpela et al.   Pediatric Obesity

Maternal Fecal Microbiota Transplantation in Cesarean-Born Infants Rapidly Restores Normal Gut Microbial Development: A Proof-of-Concept Study

(2020) Katri Korpela et al.   CELL

Evidence for maternal diet-mediated effects on the offspring microbiome and immunity: implications for public health initiatives

(2020) Julie Mirpuri   PEDIATRIC RESEARCH

Higher-Order Interactions Dampen Pairwise Competition in the Zebrafish Gut Microbiome

(2020) Deepika Sundarraman et al.   mBio

Association of Infant Antibiotic Exposure With Childhood Health Outcomes

(2020) Zaira Aversa et al.   MAYO CLINIC PROCEEDINGS

Exploring the Ecology of Bifidobacteria and Their Genetic Adaptation to the Mammalian Gut

(2020) Sabrina Duranti et al.   Microorganisms

Effects of Fecal Microbiome Transfer in Adolescents With Obesity

(2020) Karen S. W. Leong et al.   JAMA Network Open

The association between antibiotics in the first year of life and child growth trajectory

(2019) Elizabeth E. Dawson-Hahn et al.   BMC Pediatrics

Antibiotic Prescribing for Children in United States Emergency Departments: 2009–2014

(2019) Nicole M. Poole et al.   PEDIATRICS

Intestinal Bacteria Interplay With Bile and Cholesterol Metabolism: Implications on Host Physiology

(2019) Natalia Molinero et al.   Frontiers in Physiology

Prediction Models for Early Childhood Obesity: Applicability and Existing Issues

(2019) Éadaoin M. Butler et al.   Hormone Research in Paediatrics

Specific class of intrapartum antibiotics relates to maturation of the infant gut microbiota: a prospective cohort study

(2019) Modupe O. Coker et al.   BJOG-AN INTERNATIONAL JOURNAL OF OBSTETRICS AND GYNAECOLOGY

Longitudinal multi-omics of host–microbe dynamics in prediabetes

(2019) Wenyu Zhou et al.   NATURE

Propionate-Producing Consortium Restores Antibiotic-Induced Dysbiosis in a Dynamic in vitro Model of the Human Intestinal Microbial Ecosystem

(2019) Racha El Hage et al.   Frontiers in Microbiology

Vaginal microbiota in pregnancy: Role in induction of labor and seeding the neonate’s microbiota?

(2019) Kaisa Kervinen et al.   JOURNAL OF BIOSCIENCES

Stunted microbiota and opportunistic pathogen colonization in caesarean-section birth

(2019) Yan Shao et al.   NATURE

An End in Sight: Shorter Duration of Parenteral Antibiotics in Neonates

(2019) Natalia V. Leva et al.   PEDIATRICS

The Gut Microbiota in the First Decade of Life

(2019) Muriel Derrien et al.   TRENDS IN MICROBIOLOGY

Temporal development of the infant gut microbiome

(2019) Rebecca E. Moore et al.   Open Biology

The association between gut microbiota development and maturation of intestinal bile acid metabolism in the first 3 y of healthy Japanese infants

(2019) Masaru Tanaka et al.   Gut Microbes

The epidemiological burden of obesity in childhood: a worldwide epidemic requiring urgent action

(2019) Mariachiara Di Cesare et al.   BMC Medicine

Establishment of the early-life microbiome: a DOHaD perspective

(2019) Lisa F. Stinson   Journal of Developmental Origins of Health and Disease

Elective and nonelective cesarean section and obesity among young adult male offspring: A Swedish population–based cohort study

(2019) Viktor H. Ahlqvist et al.   PLOS MEDICINE

Necrotizing enterocolitis is preceded by increased gut bacterial replication, Klebsiella, and fimbriae-encoding bacteria

(2019) Matthew R. Olm et al.   Science Advances

Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome

(2018) Pamela Ferretti et al.   Cell Host & Microbe

Microbial communities as dynamical systems

(2018) Didier Gonze et al.   CURRENT OPINION IN MICROBIOLOGY

Elevated circulating levels of succinate in human obesity are linked to specific gut microbiota

(2018) Carolina Serena et al.   ISME Journal

Before the beginning: nutrition and lifestyle in the preconception period and its importance for future health

(2018) Judith Stephenson et al.   LANCET

Role of priority effects in the early-life assembly of the gut microbiota

(2018) Daniel Sprockett et al.   Nature Reviews Gastroenterology & Hepatology

Milk Glycans and Their Interaction with the Infant-Gut Microbiota

(2018) Nina Kirmiz et al.   Annual Review of Food Science and Technology

Individuality and convergence of the infant gut microbiota during the first year of life

(2018) Eric J. de Muinck et al.   Nature Communications

Insights into the role of gut microbiota in obesity: pathogenesis, mechanisms, and therapeutic perspectives

(2018) Lijuan Sun et al.   Protein & Cell

Roles of Birth Mode and Infant Gut Microbiota in Intergenerational Transmission of Overweight and Obesity From Mother to Offspring

(2018) Hein M. Tun et al.   JAMA Pediatrics

Association of Exposure to Formula in the Hospital and Subsequent Infant Feeding Practices With Gut Microbiota and Risk of Overweight in the First Year of Life

(2018) Jessica D. Forbes et al.   JAMA Pediatrics

Elevated Fecal pH Indicates a Profound Change in the Breastfed Infant Gut Microbiome Due to Reduction of Bifidobacterium over the Past Century

(2018) Bethany M. Henrick et al.   mSphere

Early differences in fecal microbiota composition in children may predict overweight

(2018) Marko Kalliomäki et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Early life colonization of the human gut: microbes matter everywhere

(2018) Katri Korpela et al.   CURRENT OPINION IN MICROBIOLOGY

The association between antibiotic use in infancy and childhood overweight or obesity: a systematic review and meta-analysis

(2018) S. A. Miller et al.   Obesity Reviews

Fucosylated oligosaccharides in mother’s milk alleviate the effects of caesarean birth on infant gut microbiota

(2018) Katri Korpela et al.   Scientific Reports

The Impact of Caesarean Section on the Risk of Childhood Overweight and Obesity: New Evidence from a Contemporary Cohort Study

(2018) Gwinyai Masukume et al.   Scientific Reports

Experimental evaluation of the importance of colonization history in early-life gut microbiota assembly

(2018) Inés Martínez et al.   eLife

Microbially Produced Imidazole Propionate Impairs Insulin Signaling through mTORC1

(2018) Ara Koh et al.   CELL

Gut Microbiota in the First 2 Years of Life and the Association with Body Mass Index at Age 12 in a Norwegian Birth Cohort

(2018) Maggie A. Stanislawski et al.   mBio

The gut microbiota in infants of obese mothers increases inflammation and susceptibility to NAFLD

(2018) Taylor K. Soderborg et al.   Nature Communications

Birth mode is associated with earliest strain-conferred gut microbiome functions and immunostimulatory potential

(2018) Linda Wampach et al.   Nature Communications

Meta-analysis of effects of exclusive breastfeeding on infant gut microbiota across populations

(2018) Nhan T. Ho et al.   Nature Communications

Genomic variation and strain-specific functional adaptation in the human gut microbiome during early life

(2018) Tommi Vatanen et al.   Nature Microbiology

The Human Microbiome and Child Growth – First 1000 Days and Beyond

(2018) Ruairi C. Robertson et al.   TRENDS IN MICROBIOLOGY

Maternal modifiers of the infant gut microbiota: metabolic consequences

(2017) Christopher M Mulligan et al.   JOURNAL OF ENDOCRINOLOGY

Infant nutrition and maternal obesity influence the risk of non-alcoholic fatty liver disease in adolescents

(2017) Oyekoya T. Ayonrinde et al.   JOURNAL OF HEPATOLOGY

The First Microbial Colonizers of the Human Gut: Composition, Activities, and Health Implications of the Infant Gut Microbiota

(2017) Christian Milani et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Quantitative microbiome profiling links gut community variation to microbial load

(2017) Doris Vandeputte et al.   NATURE

Childhood BMI in relation to microbiota in infancy and lifetime antibiotic use

(2017) K. Korpela et al.   Microbiome

Pre-pregnancy weight, gestational weight gain, and the gut microbiota of mothers and their infants

(2017) Maggie A. Stanislawski et al.   Microbiome

Increased weight gain by C-section: Functional significance of the primordial microbiome

(2017) Keith A. Martinez et al.   Science Advances

Linking Spatial Structure and Community-Level Biotic Interactions through Cooccurrence and Time Series Modeling of the Human Intestinal Microbiota

(2017) Eric J. de Muinck et al.   mSystems

Variation in Microbiome LPS Immunogenicity Contributes to Autoimmunity in Humans

(2016) Tommi Vatanen et al.   CELL

The microbiome in early life: implications for health outcomes

(2016) Sabrina Tamburini et al.   NATURE MEDICINE

The maternal microbiota drives early postnatal innate immune development

(2016) M. Gomez de Aguero et al.   SCIENCE

Intestinal microbiome is related to lifetime antibiotic use in Finnish pre-school children

(2016) Katri Korpela et al.   Nature Communications

Association of Early-Life Antibiotic Use and Protective Effects of Breastfeeding

(2016) Katri Korpela et al.   JAMA Pediatrics

Long-term consequences of breastfeeding on cholesterol, obesity, systolic blood pressure and type 2 diabetes: a systematic review and meta-analysis

(2015) Bernardo L. Horta et al.   ACTA PAEDIATRICA

Associations between human milk oligosaccharides and infant body composition in the first 6 mo of life

(2015) Tanya L Alderete et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Dynamics and Stabilization of the Human Gut Microbiome during the First Year of Life

(2015) Fredrik Bäckhed et al.   Cell Host & Microbe

Antibiotic Exposure in Infancy and Risk of Being Overweight in the First 24 Months of Life

(2015) A. Saari et al.   PEDIATRICS

Growth dynamics of gut microbiota in health and disease inferred from single metagenomic samples

(2015) T. Korem et al.   SCIENCE

The infant microbiome development: mom matters

(2015) Noel T. Mueller et al.   TRENDS IN MOLECULAR MEDICINE

The Infant Gut Microbiome: Evidence for Obesity Risk and Dietary Intervention

(2015) Petya Koleva et al.   Nutrients

Ecology of bacteria in the human gastrointestinal tract—identification of keystone and foundation taxa

(2015) Pål Trosvik et al.   Microbiome

The association between breastfeeding and childhood obesity: a meta-analysis

(2014) Jing Yan et al.   BMC PUBLIC HEALTH

Altering the Intestinal Microbiota during a Critical Developmental Window Has Lasting Metabolic Consequences

(2014) Laura M. Cox et al.   CELL

Probiotics during weaning: a follow-up study on effects on body composition and metabolic markers at school age

(2014) Frida Karlsson Videhult et al.   EUROPEAN JOURNAL OF NUTRITION

Does weight loss in overweight or obese women improve fertility treatment outcomes? A systematic review

(2014) K. A. Sim et al.   Obesity Reviews

Cesarean Section and Chronic Immune Disorders

(2014) A. Sevelsted et al.   PEDIATRICS

Mode of Delivery and Offspring Body Mass Index, Overweight and Obesity in Adult Life: A Systematic Review and Meta-Analysis

(2014) Karthik Darmasseelane et al.   PLoS One

The impact of antibiotics on growth in children in low and middle income countries: systematic review and meta-analysis of randomised controlled trials

(2014) E. K. Gough et al.   BMJ-British Medical Journal

Use of antibiotics as feed additives: a burning question

(2014) Madhab K. Chattopadhyay   Frontiers in Microbiology

Pediatric non alcoholic fatty liver disease: old and new concepts on development, progression, metabolic insight and potential treatment targets

(2013) Valentina Giorgio et al.   BMC Pediatrics

Timing of the introduction of complementary feeding and risk of childhood obesity: a systematic review

(2013) J Pearce et al.   INTERNATIONAL JOURNAL OF OBESITY

Impact of oral vancomycin on gut microbiota, bile acid metabolism, and insulin sensitivity

(2013) Anne Vrieze et al.   JOURNAL OF HEPATOLOGY

High-Throughput Sequencing Reveals the Incomplete, Short-Term Recovery of Infant Gut Microbiota following Parenteral Antibiotic Treatment with Ampicillin and Gentamicin

(2012) Fiona Fouhy et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Impact of probiotic feeding during weaning on the serum lipid profile and plasma metabolome in infants

(2012) Elin Chorell et al.   BRITISH JOURNAL OF NUTRITION

Early life antibiotic-driven changes in microbiota enhance susceptibility to allergic asthma

(2012) Shannon L Russell et al.   EMBO REPORTS

The impact of cesarean section on offspring overweight and obesity: a systematic review and meta-analysis

(2012) H-t Li et al.   INTERNATIONAL JOURNAL OF OBESITY

Antibiotics in early life alter the murine colonic microbiome and adiposity

(2012) Ilseung Cho et al.   NATURE

Microbial Exposure During Early Life Has Persistent Effects on Natural Killer T Cell Function

(2012) T. Olszak et al.   SCIENCE

Effects of Differences in Lipid A Structure on TLR4 Pro-Inflammatory Signaling and Inflammasome Activation

(2012) Paula M. Chilton et al.   Frontiers in Immunology

Intestinal microflora and body mass index during the first three years of life: an observational study

(2011) Carl Vael et al.   Gut Pathogens

The impact of perinatal probiotic intervention on the development of overweight and obesity: follow-up study from birth to 10 years

(2010) R Luoto et al.   INTERNATIONAL JOURNAL OF OBESITY

Influence of early gut microbiota on the maturation of childhood mucosal and systemic immune responses

(2009) Y. M. Sjögren et al.   CLINICAL AND EXPERIMENTAL ALLERGY