- Home
- Publications
- Publication Search
- Publication Details
Title
Towards Visual Proteomics at High Resolution
Authors
Keywords
cryo electron tomography, cryo-FIB, cryo-CLEM, super-resolution light microscopy, machine learning
Journal
JOURNAL OF MOLECULAR BIOLOGY
Volume -, Issue -, Pages 167187
Publisher
Elsevier BV
Online
2021-08-10
DOI
10.1016/j.jmb.2021.167187
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Unveiling the polarity of actin filaments by cryo-electron tomography
- (2021) Bruno Martins et al. STRUCTURE
- NMR spectroscopy captures the essential role of dynamics in regulating biomolecular function
- (2021) T. Reid Alderson et al. CELL
- Multi-particle cryo-EM refinement with M visualizes ribosome-antibiotic complex at 3.5 Å in cells
- (2021) Dimitry Tegunov et al. NATURE METHODS
- Post-correlation on-lamella cryo-CLEM reveals the membrane architecture of lamellar bodies
- (2021) Steffen Klein et al. Communications Biology
- In situ architecture of neuronal α-Synuclein inclusions
- (2021) Victoria A. Trinkaus et al. Nature Communications
- Locating macromolecular assemblies in cells by 2D template matching with cisTEM
- (2021) Bronwyn A Lucas et al. eLife
- Automated cryo-lamella preparation for high-throughput in-situ structural biology
- (2020) Genevieve Buckley et al. JOURNAL OF STRUCTURAL BIOLOGY
- Template-free detection and classification of membrane-bound complexes in cryo-electron tomograms
- (2020) Antonio Martinez-Sanchez et al. NATURE METHODS
- MINFLUX nanoscopy delivers 3D multicolor nanometer resolution in cells
- (2020) Klaus C. Gwosch et al. NATURE METHODS
- Benchmarking tomographic acquisition schemes for high-resolution structural biology
- (2020) Beata Turoňová et al. Nature Communications
- Fully automated, sequential focused ion beam milling for cryo-electron tomography
- (2020) Tobias Zachs et al. eLife
- STOPGAP: A Software Package for Subtomogram Averaging and Refinement
- (2020) William Wan et al. MICROSCOPY AND MICROANALYSIS
- CryoSIM: super-resolution 3D structured illumination cryogenic fluorescence microscopy for correlated ultrastructural imaging
- (2020) Michael A. Phillips et al. Optica
- Cryo‐FIB‐lift‐out: practically impossible to practical reality
- (2020) CHRISTOPHER DAVID PARMENTER et al. JOURNAL OF MICROSCOPY
- Investigating the Structure of Neurotoxic Protein Aggregates Inside Cells
- (2020) Felix J.B. Bäuerlein et al. TRENDS IN CELL BIOLOGY
- Topaz-Denoise: general deep denoising models for cryoEM and cryoET
- (2020) Tristan Bepler et al. Nature Communications
- ‘It will change everything’: DeepMind’s AI makes gigantic leap in solving protein structures
- (2020) Ewen Callaway NATURE
- Rapid Tilt-Series Acquisition for Electron Cryotomography
- (2019) Georges Chreifi et al. JOURNAL OF STRUCTURAL BIOLOGY
- Correlative cryo super-resolution light and electron microscopy on mammalian cells using fluorescent proteins
- (2019) Maarten W. Tuijtel et al. Scientific Reports
- Dimers of mitochondrial ATP synthase induce membrane curvature and self-assemble into rows
- (2019) Thorsten B. Blum et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cryo-SOFI enabling low-dose super-resolution correlative light and electron cryo-microscopy
- (2019) Felipe Moser et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Multicolor localization microscopy and point-spread-function engineering by deep learning
- (2019) Eran Hershko et al. OPTICS EXPRESS
- Consideration of sample motion in cryo-tomography based on alignment residual interpolation
- (2019) Jose-Jesus Fernandez et al. JOURNAL OF STRUCTURAL BIOLOGY
- Fluorescence-Based Detection of Membrane Fusion State on a Cryo-EM Grid using Correlated Cryo-Fluorescence and Cryo-Electron Microscopy
- (2019) Lauren Ann Metskas et al. MICROSCOPY AND MICROANALYSIS
- A cryo-FIB lift-out technique enables molecular-resolution cryo-ET within native Caenorhabditis elegans tissue
- (2019) Miroslava Schaffer et al. NATURE METHODS
- ETDB-Caltech: A blockchain-based distributed public database for electron tomography
- (2019) Davi R. Ortega et al. PLoS One
- PIE-scope, integrated cryo-correlative light and FIB/SEM microscopy
- (2019) Sergey Gorelick et al. eLife
- Extracellular matrix micropatterning technology for whole cell cryogenic electron microscopy studies
- (2019) Leeya Engel et al. JOURNAL OF MICROMECHANICS AND MICROENGINEERING
- Laser phase plate for transmission electron microscopy
- (2019) Osip Schwartz et al. NATURE METHODS
- Liquid-crystalline phase transitions in lipid droplets are related to cellular states and specific organelle association
- (2019) Julia Mahamid et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Real-time cryo-electron microscopy data preprocessing with Warp
- (2019) Dimitry Tegunov et al. NATURE METHODS
- A complete data processing workflow for cryo-ET and subtomogram averaging
- (2019) Muyuan Chen et al. NATURE METHODS
- Tailoring cryo-electron microscopy grids by photo-micropatterning for in-cell structural studies
- (2019) Mauricio Toro-Nahuelpan et al. NATURE METHODS
- Cryo electron tomography with Volta phase plate reveals novel structural foundations of the 96-nm axonemal repeat in the pathogen Trypanosoma brucei
- (2019) Simon Imhof et al. eLife
- AutoCLEM: An Automated Workflow for Correlative Live-Cell Fluorescence Microscopy and Cryo-Electron Tomography
- (2019) Xiaofeng Fu et al. Scientific Reports
- Differentiation and Characterization of Excitatory and Inhibitory Synapses by Cryo-electron Tomography and Correlative Microscopy
- (2018) Chang-Lu Tao et al. JOURNAL OF NEUROSCIENCE
- Cryo-tomography tilt-series alignment with consideration of the beam-induced sample motion
- (2018) Jose-Jesus Fernandez et al. JOURNAL OF STRUCTURAL BIOLOGY
- Aberration-corrected cryoimmersion light microscopy
- (2018) Raffaele Faoro et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- cisTEM, user-friendly software for single-particle image processing
- (2018) Timothy Grant et al. eLife
- Animal models of neurodegenerative diseases
- (2018) Ted M. Dawson et al. NATURE NEUROSCIENCE
- Super-resolution microscopy demystified
- (2018) Lothar Schermelleh et al. NATURE CELL BIOLOGY
- emClarity: software for high-resolution cryo-electron tomography and subtomogram averaging
- (2018) Benjamin A. Himes et al. NATURE METHODS
- Content-aware image restoration: pushing the limits of fluorescence microscopy
- (2018) Martin Weigert et al. NATURE METHODS
- Ultra-stable super-resolution fluorescence cryo-microscopy for correlative light and electron cryo-microscopy
- (2018) Xiaojun Xu et al. Science China-Life Sciences
- New tools for automated high-resolution cryo-EM structure determination in RELION-3
- (2018) Jasenko Zivanov et al. eLife
- New hardware and workflows for semi-automated correlative cryo-fluorescence and cryo-electron microscopy/tomography
- (2017) Martin Schorb et al. JOURNAL OF STRUCTURAL BIOLOGY
- Implementation of a cryo-electron tomography tilt-scheme optimized for high resolution subtomogram averaging
- (2017) Wim J.H. Hagen et al. JOURNAL OF STRUCTURAL BIOLOGY
- MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy
- (2017) Shawn Q Zheng et al. NATURE METHODS
- In situ structural studies of tripeptidyl peptidase II (TPPII) reveal spatial association with proteasomes
- (2017) Yoshiyuki Fukuda et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Assembly of a nucleus-like structure during viral replication in bacteria
- (2017) Vorrapon Chaikeeratisak et al. SCIENCE
- Single-protein detection in crowded molecular environments in cryo-EM images
- (2017) J Peter Rickgauer et al. eLife
- TheDynamopackage for tomography and subtomogram averaging: components forMATLAB, GPU computing and EC2 Amazon Web Services
- (2017) Daniel Castaño-Díez Acta Crystallographica Section D-Structural Biology
- Towards correlative super-resolution fluorescence and electron cryo-microscopy
- (2016) Georg Wolff et al. BIOLOGY OF THE CELL
- Site-Specific Cryo-focused Ion Beam Sample Preparation Guided by 3D Correlative Microscopy
- (2016) Jan Arnold et al. BIOPHYSICAL JOURNAL
- EMPIAR: a public archive for raw electron microscopy image data
- (2016) Andrii Iudin et al. NATURE METHODS
- Multicolour localization microscopy by point-spread-function engineering
- (2016) Yoav Shechtman et al. Nature Photonics
- Correlated fluorescence microscopy and cryo-electron tomography of virus-infected or transfected mammalian cells
- (2016) Cheri M Hampton et al. Nature Protocols
- Resolving macromolecular structures from electron cryo-tomography data using subtomogram averaging in RELION
- (2016) Tanmay A M Bharat et al. Nature Protocols
- Nanometer resolution imaging and tracking of fluorescent molecules with minimal photon fluxes
- (2016) Francisco Balzarotti et al. SCIENCE
- Visualizing the molecular sociology at the HeLa cell nuclear periphery
- (2016) J. Mahamid et al. SCIENCE
- Actin Organization in Cells Responding to a Perforated Surface, Revealed by Live Imaging and Cryo-Electron Tomography
- (2016) Marion Jasnin et al. STRUCTURE
- Cryo-Electron Tomography: Can it Reveal the Molecular Sociology of Cells in Atomic Detail?
- (2016) Martin Beck et al. TRENDS IN CELL BIOLOGY
- Using Tomoauto: A Protocol for High-throughput Automated Cryo-electron Tomography
- (2016) Dustin R. Morado et al. Jove-Journal of Visualized Experiments
- Single particle tomography in EMAN2
- (2015) Jesús G. Galaz-Montoya et al. JOURNAL OF STRUCTURAL BIOLOGY
- A focused ion beam milling and lift-out approach for site-specific preparation of frozen-hydrated lamellas from multicellular organisms
- (2015) Julia Mahamid et al. JOURNAL OF STRUCTURAL BIOLOGY
- A molecular census of 26S proteasomes in intact neurons
- (2015) S. Asano et al. SCIENCE
- Three-dimensional super-resolution protein localization correlated with vitrified cellular context
- (2015) Bei Liu et al. Scientific Reports
- Measuring the optimal exposure for single particle cryo-EM using a 2.6 Å reconstruction of rotavirus VP6
- (2015) Timothy Grant et al. eLife
- Fluorescence cryo-microscopy: current challenges and prospects
- (2014) Rainer Kaufmann et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- Extending Single-Molecule Microscopy Using Optical Fourier Processing
- (2014) Adam S. Backer et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Robust membrane detection based on tensor voting for electron tomography
- (2014) Antonio Martinez-Sanchez et al. JOURNAL OF STRUCTURAL BIOLOGY
- Super-Resolution Microscopy Using Standard Fluorescent Proteins in Intact Cells under Cryo-Conditions
- (2014) Rainer Kaufmann et al. NANO LETTERS
- Multiplexed 3D cellular super-resolution imaging with DNA-PAINT and Exchange-PAINT
- (2014) Ralf Jungmann et al. NATURE METHODS
- Correlated cryogenic photoactivated localization microscopy and cryo-electron tomography
- (2014) Yi-Wei Chang et al. NATURE METHODS
- Volta potential phase plate for in-focus phase contrast transmission electron microscopy
- (2014) R. Danev et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Electron counting and beam-induced motion correction enable near-atomic-resolution single-particle cryo-EM
- (2013) Xueming Li et al. NATURE METHODS
- Correlated cryo-fluorescence and cryo-electron microscopy with high spatial precision and improved sensitivity
- (2013) Martin Schorb et al. ULTRAMICROSCOPY
- High-precision correlative fluorescence and electron cryo microscopy using two independent alignment markers
- (2013) Pascale Schellenberger et al. ULTRAMICROSCOPY
- Automated tracing of filaments in 3D electron tomography reconstructions using Sculptor and Situs
- (2012) Mirabela Rusu et al. JOURNAL OF STRUCTURAL BIOLOGY
- Beam-induced motion of vitrified specimen on holey carbon film
- (2012) Axel F. Brilot et al. JOURNAL OF STRUCTURAL BIOLOGY
- Focused ion beam micromachining of eukaryotic cells for cryoelectron tomography
- (2012) A. Rigort et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Skin ice nucleators and glycerol in the freezing-tolerant frog Litoria ewingii
- (2011) Kalinka M. J. Rexer-Huber et al. JOURNAL OF COMPARATIVE PHYSIOLOGY B-BIOCHEMICAL SYSTEMIC AND ENVIRONMENTAL PHYSIOLOGY
- Clustering and variance maps for cryo-electron tomography using wedge-masked differences
- (2011) John M. Heumann et al. JOURNAL OF STRUCTURAL BIOLOGY
- PyTom: A python-based toolbox for localization of macromolecules in cryo-electron tomograms and subtomogram analysis
- (2011) Thomas Hrabe et al. JOURNAL OF STRUCTURAL BIOLOGY
- Automated segmentation of electron tomograms for a quantitative description of actin filament networks
- (2011) Alexander Rigort et al. JOURNAL OF STRUCTURAL BIOLOGY
- Radiation damage in single-particle cryo-electron microscopy: effects of dose and dose rate
- (2011) Manikandan Karuppasamy et al. JOURNAL OF SYNCHROTRON RADIATION
- Micromachining tools and correlative approaches for cellular cryo-electron tomography
- (2010) Alexander Rigort et al. JOURNAL OF STRUCTURAL BIOLOGY
- Tools for correlative cryo-fluorescence microscopy and cryo-electron tomography applied to whole mitochondria in human endothelial cells
- (2009) Linda F. van Driel et al. EUROPEAN JOURNAL OF CELL BIOLOGY
- High-aperture cryogenic light microscopy
- (2009) M.A. LE GROS et al. JOURNAL OF MICROSCOPY
- Three-dimensional, single-molecule fluorescence imaging beyond the diffraction limit by using a double-helix point spread function
- (2009) S. R. P. Pavani et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Electron microscopy of high pressure frozen samples: bridging the gap between cellular ultrastructure and atomic resolution
- (2008) Daniel Studer et al. HISTOCHEMISTRY AND CELL BIOLOGY
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now