Locating macromolecular assemblies in cells by 2D template matching with cisTEM
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Locating macromolecular assemblies in cells by 2D template matching with cisTEM
Authors
Keywords
-
Journal
eLife
Volume 10, Issue -, Pages -
Publisher
eLife Sciences Publications, Ltd
Online
2021-06-11
DOI
10.7554/elife.68946
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Multi-particle cryo-EM refinement with M visualizes ribosome-antibiotic complex at 3.5 Å in cells
- (2021) Dimitry Tegunov et al. NATURE METHODS
- TEM bright field imaging of thick specimens: nodes in Thon ring patterns
- (2020) Willem Tichelaar et al. ULTRAMICROSCOPY
- In-cell architecture of an actively transcribing-translating expressome
- (2020) Francis J. O’Reilly et al. SCIENCE
- Subnanometer-resolution structure determination in situ by hybrid subtomogram averaging - single particle cryo-EM
- (2020) Ricardo M. Sanchez et al. Nature Communications
- Advances in cryo-electron tomography and subtomogram averaging and classification
- (2019) Peijun Zhang CURRENT OPINION IN STRUCTURAL BIOLOGY
- In Situ Structure of Neuronal C9orf72 Poly-GA Aggregates Reveals Proteasome Recruitment
- (2018) Qiang Guo et al. CELL
- Structural basis for coupling protein transport and N-glycosylation at the mammalian endoplasmic reticulum
- (2018) Katharina Braunger et al. SCIENCE
- cisTEM, user-friendly software for single-particle image processing
- (2018) Timothy Grant et al. eLife
- Unravelling molecular complexity in structural cell biology
- (2018) Stefan Pfeffer et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- emClarity: software for high-resolution cryo-electron tomography and subtomogram averaging
- (2018) Benjamin A. Himes et al. NATURE METHODS
- New tools for automated high-resolution cryo-EM structure determination in RELION-3
- (2018) Jasenko Zivanov et al. eLife
- Automated tilt series alignment and tomographic reconstruction in IMOD
- (2017) David N. Mastronarde et al. JOURNAL OF STRUCTURAL BIOLOGY
- Implementation of a cryo-electron tomography tilt-scheme optimized for high resolution subtomogram averaging
- (2017) Wim J.H. Hagen et al. JOURNAL OF STRUCTURAL BIOLOGY
- Proteasomes tether to two distinct sites at the nuclear pore complex
- (2017) Sahradha Albert et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Using the Volta phase plate with defocus for cryo-EM single particle analysis
- (2017) Radostin Danev et al. eLife
- Single-protein detection in crowded molecular environments in cryo-EM images
- (2017) J Peter Rickgauer et al. eLife
- Resolving macromolecular structures from electron cryo-tomography data using subtomogram averaging in RELION
- (2016) Tanmay A M Bharat et al. Nature Protocols
- Cryo-Electron Tomography: Can it Reveal the Molecular Sociology of Cells in Atomic Detail?
- (2016) Martin Beck et al. TRENDS IN CELL BIOLOGY
- Structural insights into ribosome translocation
- (2016) Clarence Ling et al. Wiley Interdisciplinary Reviews-RNA
- CTFFIND4: Fast and accurate defocus estimation from electron micrographs
- (2015) Alexis Rohou et al. JOURNAL OF STRUCTURAL BIOLOGY
- Semi-automated selection of cryo-EM particles in RELION-1.3
- (2015) Sjors H.W. Scheres JOURNAL OF STRUCTURAL BIOLOGY
- Structure of the Bacillus subtilis 70S ribosome reveals the basis for species-specific stalling
- (2015) Daniel Sohmen et al. Nature Communications
- Measuring the optimal exposure for single particle cryo-EM using a 2.6 Å reconstruction of rotavirus VP6
- (2015) Timothy Grant et al. eLife
- Quantifying resolution limiting factors in subtomogram averaged cryo-electron tomography using simulations
- (2014) Lenard M. Voortman et al. JOURNAL OF STRUCTURAL BIOLOGY
- Controlled Bacterial Lysis for Electron Tomography of Native Cell Membranes
- (2014) Xiaofeng Fu et al. STRUCTURE
- Predicting the Minimal Translation Apparatus: Lessons from the Reductive Evolution of Mollicutes
- (2014) Henri Grosjean et al. PLoS Genetics
- Determination of protein structure at 8.5Å resolution using cryo-electron tomography and sub-tomogram averaging
- (2013) Florian K.M. Schur et al. JOURNAL OF STRUCTURAL BIOLOGY
- Finding trimeric HIV-1 envelope glycoproteins in random noise
- (2013) M. van Heel PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Structure of trimeric HIV-1 envelope glycoproteins
- (2013) S. Subramaniam PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Avoiding the pitfalls of single particle cryo-electron microscopy: Einstein from noise
- (2013) R. Henderson PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Thinning of large mammalian cells for cryo-TEM characterization by cryo-FIB milling
- (2012) K.M. STRUNK et al. JOURNAL OF MICROSCOPY
- Unraveling the structure of membrane proteins in situ by transfer function corrected cryo-electron tomography
- (2012) Matthias Eibauer et al. JOURNAL OF STRUCTURAL BIOLOGY
- High-throughput subtomogram alignment and classification by Fourier space constrained fast volumetric matching
- (2012) Min Xu et al. JOURNAL OF STRUCTURAL BIOLOGY
- Beam-induced motion of vitrified specimen on holey carbon film
- (2012) Axel F. Brilot et al. JOURNAL OF STRUCTURAL BIOLOGY
- Computational methods for electron tomography
- (2012) Jose-Jesus Fernandez MICRON
- Prevention of overfitting in cryo-EM structure determination
- (2012) Sjors H W Scheres et al. NATURE METHODS
- Focused ion beam micromachining of eukaryotic cells for cryoelectron tomography
- (2012) A. Rigort et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Protein Secondary Structure Determination by Constrained Single-Particle Cryo-Electron Tomography
- (2012) Alberto Bartesaghi et al. STRUCTURE
- PyTom: A python-based toolbox for localization of macromolecules in cryo-electron tomograms and subtomogram analysis
- (2011) Thomas Hrabe et al. JOURNAL OF STRUCTURAL BIOLOGY
- Metrics for 3D Rotations: Comparison and Analysis
- (2009) Du Q. Huynh JOURNAL OF MATHEMATICAL IMAGING AND VISION
- Proteome Organization in a Genome-Reduced Bacterium
- (2009) S. Kuhner et al. SCIENCE
- Classification and 3D averaging with missing wedge correction in biological electron tomography☆
- (2008) A. Bartesaghi et al. JOURNAL OF STRUCTURAL BIOLOGY
- Classification of cryo-electron sub-tomograms using constrained correlation
- (2007) Friedrich Förster et al. JOURNAL OF STRUCTURAL BIOLOGY
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now