Experimental evolution reveals nitrate tolerance mechanisms in Desulfovibrio vulgaris

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Key Metabolites and Mechanistic Changes for Salt Tolerance in an Experimentally Evolved Sulfate-Reducing Bacterium, Desulfovibrio vulgaris

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Global patterns of nitrate storage in the vadose zone

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The Effectiveness of Nitrate-Mediated Control of the Oil Field Sulfur Cycle Depends on the Toluene Content of the Oil

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Regulation, sensory domains and roles of twoDesulfovibrio desulfuricansATCC27774 Crp family transcription factors, HcpR1 and HcpR2, in response to nitrosative stress

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Divergent evolution peaks under intermediate population bottlenecks during bacterial experimental evolution

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Independence of Nitrate and Nitrite Inhibition of Desulfovibrio vulgaris Hildenborough and Use of Nitrite as a Substrate for Growth

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Rapid selective sweep of pre-existing polymorphisms and slow fixation of new mutations in experimental evolution of Desulfovibrio vulgaris

(2015) Aifen Zhou et al.   ISME Journal

Quantitative evolutionary dynamics using high-resolution lineage tracking

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Nitrate Storage and Dissimilatory Nitrate Reduction by Eukaryotic Microbes

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Experimental microbial evolution: history and conceptual underpinnings

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Global rates of marine sulfate reduction and implications for sub-sea-floor metabolic activities

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Genetic basis for nitrate resistance in Desulfovibrio strains

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Acetate Production from Oil under Sulfate-Reducing Conditions in Bioreactors Injected with Sulfate and Nitrate

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Characterization of NaCl tolerance in Desulfovibrio vulgaris Hildenborough through experimental evolution

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Genome dynamics during experimental evolution

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The genetic causes of convergent evolution

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Convergent Evolution of Hyperswarming Leads to Impaired Biofilm Formation in Pathogenic Bacteria

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Evolutionary rescue of a green alga kept in the dark

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High-throughput Isolation and Characterization of Untagged Membrane Protein Complexes: Outer Membrane Complexes of Desulfovibrio vulgaris

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Fast gapped-read alignment with Bowtie 2

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The Molecular Diversity of Adaptive Convergence

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Functional Characterization of Crp/Fnr-Type Global Transcriptional Regulators in Desulfovibrio vulgaris Hildenborough

(2011) Aifen Zhou et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Denitrifying Bacteria from the Genus Rhodanobacter Dominate Bacterial Communities in the Highly Contaminated Subsurface of a Nuclear Legacy Waste Site

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An HcpR homologue fromDesulfovibrio desulfuricansand its possible role in nitrate reduction and nitrosative stress

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Btrim: A fast, lightweight adapter and quality trimming program for next-generation sequencing technologies

(2011) Yong Kong   GENOMICS

Lag Phase Is a Distinct Growth Phase That Prepares Bacteria for Exponential Growth and Involves Transient Metal Accumulation

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How sulphate-reducing microorganisms cope with stress: lessons from systems biology

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Metabolic Flexibility of Sulfate-Reducing Bacteria

(2011) Caroline M. Plugge et al.   Frontiers in Microbiology

Systematic mapping of two component response regulators to gene targets in a model sulfate reducing bacterium

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Impact of elevated nitrate on sulfate-reducing bacteria: a comparative Study of Desulfovibrio vulgaris

(2010) Qiang He et al.   ISME Journal

Development of a Markerless Genetic Exchange System for Desulfovibrio vulgaris Hildenborough and Its Use in Generating a Strain with Increased Transformation Efficiency

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