How sulphate-reducing microorganisms cope with stress: lessons from systems biology

Significant Association between Sulfate-Reducing Bacteria and Uranium-Reducing Microbial Communities as Revealed by a Combined Massively Parallel Sequencing-Indicator Species Approach

(2010) E. Cardenas et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity of Dissimilatory Sulfite Reductase Genes (dsrAB) in a Salt Marsh Impacted by Long-Term Acid Mine Drainage

(2010) J. W. Moreau et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbial Communities and Functional Genes Associated with Soil Arsenic Contamination and the Rhizosphere of the Arsenic-Hyperaccumulating Plant Pteris vittata L.

(2010) J. Xiong et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Establishment and metabolic analysis of a model microbial community for understanding trophic and electron accepting interactions of subsurface anaerobic environments

(2010) Lance D Miller et al.   BMC MICROBIOLOGY

Diversity of structure and function of response regulator output domains

(2010) Michael Y Galperin   CURRENT OPINION IN MICROBIOLOGY

Responses of microbial community functional structures to pilot-scale uranium in situ bioremediation

(2010) Meiying Xu et al.   ISME Journal

Impact of elevated nitrate on sulfate-reducing bacteria: a comparative Study of Desulfovibrio vulgaris

(2010) Qiang He et al.   ISME Journal

GeoChip 3.0 as a high-throughput tool for analyzing microbial community composition, structure and functional activity

(2010) Zhili He et al.   ISME Journal

Functional gene diversity of soil microbial communities from five oil-contaminated fields in China

(2010) Yuting Liang et al.   ISME Journal

Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community

(2010) Christopher L Hemme et al.   ISME Journal

The Qrc Membrane Complex, Related to the Alternative Complex III, Is a Menaquinone Reductase Involved in Sulfate Respiration

(2010) Sofia S. Venceslau et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Construction and Preliminary Analysis of a Deep-Sea Sediment Metagenomic Fosmid Library from Qiongdongnan Basin, South China Sea

(2010) Yongfei Hu et al.   MARINE BIOTECHNOLOGY

Microbial and Mineralogical Characterizations of Soils Collected from the Deep Biosphere of the Former Homestake Gold Mine, South Dakota

(2010) Gurdeep Rastogi et al.   MICROBIAL ECOLOGY

Interplay of heritage and habitat in the distribution of bacterial signal transduction systems

(2010) Michael Y. Galperin et al.   Molecular BioSystems

Metabolomic and transcriptomic stress response of Escherichia coli

(2010) Szymon Jozefczuk et al.   Molecular Systems Biology

Rapid evolution of stability and productivity at the origin of a microbial mutualism

(2010) K. L. Hillesland et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Deep-Sea Oil Plume Enriches Indigenous Oil-Degrading Bacteria

(2010) Terry C. Hazen et al.   SCIENCE

Direct Exchange of Electrons Within Aggregates of an Evolved Syntrophic Coculture of Anaerobic Bacteria

(2010) Z. M. Summers et al.   SCIENCE

Global Transcriptional, Physiological, and Metabolite Analyses of the Responses of Desulfovibrio vulgaris Hildenborough to Salt Adaptation

(2009) Z. He et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Can microbially-generated hydrogen sulfide account for the rates of U(VI) reduction by a sulfate-reducing bacterium?

(2009) Benjaporn Boonchayaanant et al.   BIODEGRADATION

GeoChip-based analysis of functional microbial communities during the reoxidation of a bioreduced uranium-contaminated aquifer

(2009) Joy D. Van Nostrand et al.   ENVIRONMENTAL MICROBIOLOGY

Genome sequence ofDesulfobacterium autotrophicumHRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide

(2009) Axel W. Strittmatter et al.   ENVIRONMENTAL MICROBIOLOGY

Functional Gene Array-Based Analysis of Microbial Community Structure in Groundwaters with a Gradient of Contaminant Levels

(2009) Patricia J. Waldron et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Microarray-based analysis of microbial functional diversity along an oil contamination gradient in oil field

(2009) Yuting Liang et al.   FEMS MICROBIOLOGY ECOLOGY

Whole genome sequence of Desulfovibrio magneticus strain RS-1 revealed common gene clusters in magnetotactic bacteria

(2009) H. Nakazawa et al.   GENOME RESEARCH

The Electron Transfer System of Syntrophically Grown Desulfovibrio vulgaris

(2009) C. B. Walker et al.   JOURNAL OF BACTERIOLOGY

Adaptive prediction of environmental changes by microorganisms

(2009) Amir Mitchell et al.   NATURE

Electron transfer in syntrophic communities of anaerobic bacteria and archaea

(2009) Alfons J. M. Stams et al.   NATURE REVIEWS MICROBIOLOGY

Expression profiling of hypothetical genes in Desulfovibrio vulgaris leads to improved functional annotation

(2009) Dwayne A. Elias et al.   NUCLEIC ACIDS RESEARCH

Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases

(2009) Jennifer M. Brulc et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

GeoChip-based analysis of metabolic diversity of microbial communities at the Juan de Fuca Ridge hydrothermal vent

(2009) F. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Survey of large protein complexes in D. vulgaris reveals great structural diversity

(2009) B.-G. Han et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Getting in Touch with Your Friends

(2009) C. J. Marx   SCIENCE

Microbial community structures and in situ sulfate-reducing and sulfur-oxidizing activities in biofilms developed on mortar specimens in a corroded sewer system

(2009) Hisashi Satoh et al.   WATER RESEARCH

Predictive microbial ecology

(2009) Jizhong Zhou   Microbial Biotechnology

Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575T)

(2009) Stefan Spring et al.   Standards in Genomic Sciences

Functional Diversity and Electron Donor Dependence of Microbial Populations Capable of U(VI) Reduction in Radionuclide-Contaminated Subsurface Sediments

(2008) D. M. Akob et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Hexavalent chromium reduction in Desulfovibrio vulgaris Hildenborough causes transitory inhibition of sulfate reduction and cell growth

(2008) A. Klonowska et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Metagenomic and stable isotopic analyses of modern freshwater microbialites in Cuatro Ciénegas, Mexico

(2008) Mya Breitbart et al.   ENVIRONMENTAL MICROBIOLOGY

Biogeography of sulfate-reducing prokaryotes in river floodplains

(2008) Marzia Miletto et al.   FEMS MICROBIOLOGY ECOLOGY

Bacterial community succession during in situ uranium bioremediation: spatial similarities along controlled flow paths

(2008) Chiachi Hwang et al.   ISME Journal

Prokaryotic diversity, distribution and insights into their role in biogeochemical cycling in marine basalts

(2008) Olivia U Mason et al.   ISME Journal

The Complete Genome Sequence of Escherichia coli DH10B: Insights into the Biology of a Laboratory Workhorse

(2008) T. Durfee et al.   JOURNAL OF BACTERIOLOGY

Post-Translational Modifications of Desulfovibrio vulgaris Hildenborough Sulfate Reduction Pathway Proteins

(2008) Sara P. Gaucher et al.   JOURNAL OF PROTEOME RESEARCH

Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment

(2008) J. F. Biddle et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Spatial scaling of functional gene diversity across various microbial taxa

(2008) J. Zhou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diverse syntrophic partnerships from deep-sea methane vents revealed by direct cell capture and metagenomics

(2008) A. Pernthaler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Environmental Genomics Reveals a Single-Species Ecosystem Deep Within Earth

(2008) D. Chivian et al.   SCIENCE

A simple, fast, and accurate method of phylogenomic inference

(2008) Martin Wu et al.   GENOME BIOLOGY

Growth and cometabolic reduction kinetics of a uranium- and sulfate-reducingDesulfovibrio/Clostridia mixed culture: Temperature effects

(2007) Benjaporn Boonchayaanant et al.   BIOTECHNOLOGY AND BIOENGINEERING